RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 RGS22Q8NE09 1264 aa9.87□□□□□ -0.83
PDGFC-205ENST00000506880 GPRC5AQ8NFJ5 357 aa9.87□□□□□ -0.83
PDGFC-205ENST00000506880 SOCS4Q8WXH5 440 aa9.87□□□□□ -0.83
PDGFC-205ENST00000506880 JAKMIP1Q96N16 626 aaKnown RBP9.87□□□□□ -0.83
PDGFC-205ENST00000506880 SPZ1Q9BXG8 430 aa9.87□□□□□ -0.83
PDGFC-205ENST00000506880 BACH2Q9BYV9 841 aa9.87□□□□□ -0.83
PDGFC-205ENST00000506880 GLT8D2Q9H1C3 349 aa9.87□□□□□ -0.83
PDGFC-205ENST00000506880 SLC38A10Q9HBR0 1119 aa9.87□□□□□ -0.83
PDGFC-205ENST00000506880 SLC5A4Q9NY91 659 aa9.87□□□□□ -0.83
PDGFC-205ENST00000506880 SLC12A7Q9Y666 1083 aa9.87□□□□□ -0.83
PDGFC-205ENST00000506880 TACC3Q9Y6A5 838 aa9.87□□□□□ -0.83
PDGFC-205ENST00000506880 COL11A1P12107 1806 aaPredicted RBP9.86□□□□□ -0.83
PDGFC-205ENST00000506880 PALM3A6NDB9 673 aaPredicted RBP9.86□□□□□ -0.83
PDGFC-205ENST00000506880 SMIM22K7EJ46 135 aa9.86□□□□□ -0.83
PDGFC-205ENST00000506880 VWA5AO00534 786 aa9.86□□□□□ -0.83
PDGFC-205ENST00000506880 TRPA1O75762 1119 aa9.86□□□□□ -0.83
PDGFC-205ENST00000506880 CASTP20810 708 aaKnown RBP9.86□□□□□ -0.83
PDGFC-205ENST00000506880 ANTXR2P58335 489 aa9.86□□□□□ -0.83
PDGFC-205ENST00000506880 ERVK-9P63128 1117 aa9.86□□□□□ -0.83
PDGFC-205ENST00000506880 ERVK-24P63145 666 aa9.86□□□□□ -0.83
PDGFC-205ENST00000506880 HTRA3P83110 453 aa9.86□□□□□ -0.83
PDGFC-205ENST00000506880 FGD1P98174 961 aa9.86□□□□□ -0.83
PDGFC-205ENST00000506880 GRM4Q14833 912 aa9.86□□□□□ -0.83
PDGFC-205ENST00000506880 RABEP1Q15276 862 aa9.86□□□□□ -0.83
PDGFC-205ENST00000506880 TREML2Q5T2D2 321 aa9.86□□□□□ -0.83
PDGFC-205ENST00000506880 CPLX2Q6PUV4 134 aaKnown RBP9.86□□□□□ -0.83
PDGFC-205ENST00000506880 CYB5R4Q7L1T6 521 aa9.86□□□□□ -0.83
PDGFC-205ENST00000506880 RIOX2Q8IUF8 465 aa9.86□□□□□ -0.83
PDGFC-205ENST00000506880 DOCK3Q8IZD9 2030 aa9.86□□□□□ -0.83
PDGFC-205ENST00000506880 ZNF654Q8IZM8 581 aa9.86□□□□□ -0.83
PDGFC-205ENST00000506880 MSL3Q8N5Y2 521 aaKnown RBP9.86□□□□□ -0.83
PDGFC-205ENST00000506880 CHST13Q8NET6 341 aa9.86□□□□□ -0.83
PDGFC-205ENST00000506880 TEX13BQ9BXU2 312 aa9.86□□□□□ -0.83
PDGFC-205ENST00000506880 C22orf23Q9BZE7 217 aa9.86□□□□□ -0.83
PDGFC-205ENST00000506880 CTDP1Q9Y5B0 961 aaPredicted RBP9.86□□□□□ -0.83
PDGFC-205ENST00000506880 ZNFX1Q9P2E3 1918 aaKnown RBP9.86□□□□□ -0.83
PDGFC-205ENST00000506880 ST18O60284 1047 aa9.85□□□□□ -0.83
PDGFC-205ENST00000506880 HSPA1AP0DMV8 641 aaKnown RBP9.85□□□□□ -0.83
PDGFC-205ENST00000506880 HSPA1BP0DMV9 641 aaKnown RBP9.85□□□□□ -0.83
PDGFC-205ENST00000506880 SLURP2P0DP57 97 aa9.85□□□□□ -0.83
PDGFC-205ENST00000506880 XRCC5P13010 732 aaKnown RBP9.85□□□□□ -0.83
PDGFC-205ENST00000506880 FCGRTP55899 365 aa9.85□□□□□ -0.83
PDGFC-205ENST00000506880 LACTBP83111 547 aaPredicted RBP9.85□□□□□ -0.83
PDGFC-205ENST00000506880 GRM1Q13255 1194 aa9.85□□□□□ -0.83
PDGFC-205ENST00000506880 FAM83BQ5T0W9 1011 aa9.85□□□□□ -0.83
PDGFC-205ENST00000506880 SYDE2Q5VT97 1194 aa9.85□□□□□ -0.83
PDGFC-205ENST00000506880 MCTP2Q6DN12 878 aa9.85□□□□□ -0.83
PDGFC-205ENST00000506880 APOA5Q6Q788 366 aa9.85□□□□□ -0.83
PDGFC-205ENST00000506880 NFXL1Q6ZNB6 911 aa9.85□□□□□ -0.83
PDGFC-205ENST00000506880 COA7Q96BR5 231 aa9.85□□□□□ -0.83
PDGFC-205ENST00000506880 MTMR8Q96EF0 704 aa9.85□□□□□ -0.83
PDGFC-205ENST00000506880 TBC1D32Q96NH3 1257 aa9.85□□□□□ -0.83
PDGFC-205ENST00000506880 P2RX7Q99572 595 aaKnown RBP9.85□□□□□ -0.83
PDGFC-205ENST00000506880 RANBP17Q9H2T7 1088 aaKnown RBP9.85□□□□□ -0.83
PDGFC-205ENST00000506880 RIOX1Q9H6W3 641 aa9.85□□□□□ -0.83
PDGFC-205ENST00000506880 DIS3Q9Y2L1 958 aaKnown RBP9.85□□□□□ -0.83
PDGFC-205ENST00000506880 PFASO15067 1338 aa9.84□□□□□ -0.83
PDGFC-205ENST00000506880 TMEM232C9JQI7 657 aa9.84□□□□□ -0.83
PDGFC-205ENST00000506880 ZBTB43O43298 467 aa9.84□□□□□ -0.83
PDGFC-205ENST00000506880 NMT2O60551 498 aa9.84□□□□□ -0.83
PDGFC-205ENST00000506880 CDKL5O76039 1030 aa9.84□□□□□ -0.83
PDGFC-205ENST00000506880 ICAM1P05362 532 aa9.84□□□□□ -0.83
PDGFC-205ENST00000506880 HSPA8P11142 646 aaKnown RBP9.84□□□□□ -0.83
PDGFC-205ENST00000506880 PDIA4P13667 645 aaKnown RBP9.84□□□□□ -0.83
PDGFC-205ENST00000506880 GHRHRQ02643 423 aa9.84□□□□□ -0.83
PDGFC-205ENST00000506880 MKRN3Q13064 507 aaKnown RBP9.84□□□□□ -0.83
PDGFC-205ENST00000506880 CCDC96Q2M329 555 aa9.84□□□□□ -0.83
PDGFC-205ENST00000506880 LRRC47Q8N1G4 583 aaKnown RBP9.84□□□□□ -0.83
PDGFC-205ENST00000506880 FANCBQ8NB91 859 aa9.84□□□□□ -0.83
PDGFC-205ENST00000506880 ZSCAN31Q96LW9 406 aaPredicted RBP9.84□□□□□ -0.83
PDGFC-205ENST00000506880 ZIC5Q96T25 663 aa9.84□□□□□ -0.83
PDGFC-205ENST00000506880 SPATC1LQ9H0A9 340 aa9.84□□□□□ -0.83
PDGFC-205ENST00000506880 SH2B1Q9NRF2 756 aaPredicted RBP9.84□□□□□ -0.83
PDGFC-205ENST00000506880 RBPJLQ9UBG7 517 aa9.84□□□□□ -0.83
PDGFC-205ENST00000506880 NRBP1Q9UHY1 535 aa9.84□□□□□ -0.83
PDGFC-205ENST00000506880 ZNF214Q9UL59 606 aaPredicted RBP9.84□□□□□ -0.83
PDGFC-205ENST00000506880 IVNS1ABPQ9Y6Y0 642 aa9.84□□□□□ -0.83
PDGFC-205ENST00000506880 RBBP6Q7Z6E9 1792 aaKnown RBP9.83□□□□□ -0.84
PDGFC-205ENST00000506880 BAZ2BQ9UIF8 2168 aaKnown RBP9.83□□□□□ -0.84
PDGFC-205ENST00000506880 SLC15A5A6NIM6 579 aa9.83□□□□□ -0.84
PDGFC-205ENST00000506880 B4DLN1 442 aa9.83□□□□□ -0.84
PDGFC-205ENST00000506880 KLRF2D3W0D1 207 aa9.83□□□□□ -0.84
PDGFC-205ENST00000506880 HOXC6P09630 235 aa9.83□□□□□ -0.84
PDGFC-205ENST00000506880 STAT3P40763 770 aa9.83□□□□□ -0.84
PDGFC-205ENST00000506880 MRPL12P52815 198 aaKnown RBP9.83□□□□□ -0.84
PDGFC-205ENST00000506880 ZYXQ15942 572 aaKnown RBP9.83□□□□□ -0.84
PDGFC-205ENST00000506880 SHROOM1Q2M3G4 852 aaPredicted RBP9.83□□□□□ -0.84
PDGFC-205ENST00000506880 ADCK5Q3MIX3 580 aa9.83□□□□□ -0.84
PDGFC-205ENST00000506880 PPP1R18Q6NYC8 613 aa9.83□□□□□ -0.84
PDGFC-205ENST00000506880 ZNF467Q7Z7K2 595 aaPredicted RBP9.83□□□□□ -0.84
PDGFC-205ENST00000506880 MCF2L2Q86YR7 1114 aa9.83□□□□□ -0.84
PDGFC-205ENST00000506880 CCAR1Q8IX12 1150 aaKnown RBP9.83□□□□□ -0.84
PDGFC-205ENST00000506880 SPICE1Q8N0Z3 855 aa9.83□□□□□ -0.84
PDGFC-205ENST00000506880 STK11IPQ8N1F8 1099 aa9.83□□□□□ -0.84
PDGFC-205ENST00000506880 REPS2Q8NFH8 660 aa9.83□□□□□ -0.84
PDGFC-205ENST00000506880 PXYLP1Q8TE99 480 aa9.83□□□□□ -0.84
PDGFC-205ENST00000506880 CCDC12Q8WUD4 166 aaPredicted RBP9.83□□□□□ -0.84
PDGFC-205ENST00000506880 MPHOSPH6Q99547 160 aaKnown RBP9.83□□□□□ -0.84
PDGFC-205ENST00000506880 INCENPQ9NQS7 918 aa9.83□□□□□ -0.84
PDGFC-205ENST00000506880 PDRG1Q9NUG6 133 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms