RNA–Protein interactions for RNA: ENST00000506874.1

SNX2-205, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 200 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-205ENST00000506874 SNX17Q15036 470 aa19.37■□□□□ 0.69
SNX2-205ENST00000506874 SHHQ15465 462 aa19.37■□□□□ 0.69
SNX2-205ENST00000506874 RNF180Q86T96 592 aa19.37■□□□□ 0.69
SNX2-205ENST00000506874 DDX11Q96FC9 970 aa19.37■□□□□ 0.69
SNX2-205ENST00000506874 TEX13BQ9BXU2 312 aa19.37■□□□□ 0.69
SNX2-205ENST00000506874 PHF24Q9UPV7 400 aa19.37■□□□□ 0.69
SNX2-205ENST00000506874 CNPY2Q9Y2B0 182 aa19.37■□□□□ 0.69
SNX2-205ENST00000506874 RIPK3Q9Y572 518 aa19.37■□□□□ 0.69
SNX2-205ENST00000506874 LAMA2P24043 3122 aaKnown RBP19.36■□□□□ 0.69
SNX2-205ENST00000506874 A0A0C4DFX4 3053 aa19.36■□□□□ 0.69
SNX2-205ENST00000506874 TRIM43BA6NCK2 446 aa19.36■□□□□ 0.69
SNX2-205ENST00000506874 ZFYP08048 801 aaPredicted RBP19.36■□□□□ 0.69
SNX2-205ENST00000506874 ZNF865P0CJ78 1059 aaPredicted RBP19.36■□□□□ 0.69
SNX2-205ENST00000506874 AKR1A1P14550 325 aa19.36■□□□□ 0.69
SNX2-205ENST00000506874 TLE2Q04725 743 aa19.36■□□□□ 0.69
SNX2-205ENST00000506874 AAMPQ13685 434 aa19.36■□□□□ 0.69
SNX2-205ENST00000506874 C9orf50Q5SZB4 431 aa19.36■□□□□ 0.69
SNX2-205ENST00000506874 PRPF38AQ8NAV1 312 aaKnown RBP19.36■□□□□ 0.69
SNX2-205ENST00000506874 KIFC2Q96AC6 838 aa19.36■□□□□ 0.69
SNX2-205ENST00000506874 TRIM43Q96BQ3 446 aaPredicted RBP19.36■□□□□ 0.69
SNX2-205ENST00000506874 IGKV6D-41A0A0C4DH26 115 aa19.35■□□□□ 0.69
SNX2-205ENST00000506874 POTEB2H3BUK9 544 aa19.35■□□□□ 0.69
SNX2-205ENST00000506874 ZBED4O75132 1171 aa19.35■□□□□ 0.69
SNX2-205ENST00000506874 GNAT2P19087 354 aa19.35■□□□□ 0.69
SNX2-205ENST00000506874 LRRC47Q8N1G4 583 aaKnown RBP19.35■□□□□ 0.69
SNX2-205ENST00000506874 CEP95Q96GE4 821 aa19.35■□□□□ 0.69
SNX2-205ENST00000506874 SEC62Q99442 399 aaKnown RBP19.35■□□□□ 0.69
SNX2-205ENST00000506874 RAVER2Q9HCJ3 691 aaKnown RBP19.35■□□□□ 0.69
SNX2-205ENST00000506874 ZHX1Q9UKY1 873 aaPredicted RBP19.35■□□□□ 0.69
SNX2-205ENST00000506874 ISY1Q9ULR0 285 aaKnown RBP19.35■□□□□ 0.69
SNX2-205ENST00000506874 MCM3APO60318 1980 aa19.35■□□□□ 0.69
SNX2-205ENST00000506874 A0A1W2PQ45 241 aaPredicted RBP19.34■□□□□ 0.69
SNX2-205ENST00000506874 A0A1W2PQY0 241 aa19.34■□□□□ 0.69
SNX2-205ENST00000506874 PATL2C9JE40 543 aaKnown RBP19.34■□□□□ 0.69
SNX2-205ENST00000506874 IRX6P78412 446 aaPredicted RBP19.34■□□□□ 0.69
SNX2-205ENST00000506874 IFNL3Q8IZI9 196 aa19.34■□□□□ 0.69
SNX2-205ENST00000506874 CHMP4CQ96CF2 233 aa19.34■□□□□ 0.69
SNX2-205ENST00000506874 ZNF287Q9HBT7 754 aa19.34■□□□□ 0.69
SNX2-205ENST00000506874 CUL9Q8IWT3 2517 aa19.34■□□□□ 0.69
SNX2-205ENST00000506874 PQBP1O60828 265 aaKnown RBP19.33■□□□□ 0.68
SNX2-205ENST00000506874 SNAI1O95863 264 aaPredicted RBP19.33■□□□□ 0.68
SNX2-205ENST00000506874 LRRFIP1Q32MZ4 808 aaKnown RBP19.33■□□□□ 0.68
SNX2-205ENST00000506874 ZNF697Q5TEC3 545 aa19.33■□□□□ 0.68
SNX2-205ENST00000506874 C1orf53Q5VUE5 145 aa19.33■□□□□ 0.68
SNX2-205ENST00000506874 FAM109BQ6ICB4 259 aaPredicted RBP19.33■□□□□ 0.68
SNX2-205ENST00000506874 OTUD7AQ8TE49 926 aaPredicted RBP19.33■□□□□ 0.68
SNX2-205ENST00000506874 GUCD1Q96NT3 240 aa19.33■□□□□ 0.68
SNX2-205ENST00000506874 FSD1Q9BTV5 496 aa19.33■□□□□ 0.68
SNX2-205ENST00000506874 MTMR4Q9NYA4 1195 aa19.33■□□□□ 0.68
SNX2-205ENST00000506874 TTLL1O95922 423 aa19.32■□□□□ 0.68
SNX2-205ENST00000506874 CLTBP09497 229 aa19.32■□□□□ 0.68
SNX2-205ENST00000506874 TSPY3P0CV98 308 aa19.32■□□□□ 0.68
SNX2-205ENST00000506874 TSPY8P0CW00 308 aa19.32■□□□□ 0.68
SNX2-205ENST00000506874 ITGB8P26012 769 aa19.32■□□□□ 0.68
SNX2-205ENST00000506874 HDAC1Q13547 482 aaPredicted RBP19.32■□□□□ 0.68
SNX2-205ENST00000506874 SLFN13Q68D06 897 aa19.32■□□□□ 0.68
SNX2-205ENST00000506874 ANKRD35Q8N283 1001 aa19.32■□□□□ 0.68
SNX2-205ENST00000506874 MKL1Q969V6 931 aa19.32■□□□□ 0.68
SNX2-205ENST00000506874 NACAP1Q9BZK3 213 aa19.32■□□□□ 0.68
SNX2-205ENST00000506874 FEM1BQ9UK73 627 aa19.32■□□□□ 0.68
SNX2-205ENST00000506874 FAM184BQ9ULE4 1060 aa19.32■□□□□ 0.68
SNX2-205ENST00000506874 TACC3Q9Y6A5 838 aa19.32■□□□□ 0.68
SNX2-205ENST00000506874 TTC41PQ6P2S7 1318 aa19.31■□□□□ 0.68
SNX2-205ENST00000506874 SYNGAP1Q96PV0 1343 aa19.31■□□□□ 0.68
SNX2-205ENST00000506874 SYNRGQ9UMZ2 1314 aa19.31■□□□□ 0.68
SNX2-205ENST00000506874 DNAJC25-GNG10A0A024R161 153 aa19.31■□□□□ 0.68
SNX2-205ENST00000506874 ERC2O15083 957 aa19.31■□□□□ 0.68
SNX2-205ENST00000506874 ADAMTS4O75173 837 aa19.31■□□□□ 0.68
SNX2-205ENST00000506874 PDE4BQ07343 736 aa19.31■□□□□ 0.68
SNX2-205ENST00000506874 MSL3Q8N5Y2 521 aaKnown RBP19.31■□□□□ 0.68
SNX2-205ENST00000506874 NAPBQ9H115 298 aa19.31■□□□□ 0.68
SNX2-205ENST00000506874 SLC38A10Q9HBR0 1119 aa19.31■□□□□ 0.68
SNX2-205ENST00000506874 HOMER2Q9NSB8 354 aa19.31■□□□□ 0.68
SNX2-205ENST00000506874 TMEM232C9JQI7 657 aa19.3■□□□□ 0.68
SNX2-205ENST00000506874 ATP2A1O14983 1001 aa19.3■□□□□ 0.68
SNX2-205ENST00000506874 BMP3P12645 472 aa19.3■□□□□ 0.68
SNX2-205ENST00000506874 RAG1P15918 1043 aa19.3■□□□□ 0.68
SNX2-205ENST00000506874 ACLYP53396 1101 aa19.3■□□□□ 0.68
SNX2-205ENST00000506874 TFAP4Q01664 338 aa19.3■□□□□ 0.68
SNX2-205ENST00000506874 MAMDC4Q6UXC1 1216 aa19.3■□□□□ 0.68
SNX2-205ENST00000506874 GMCL1P1Q8NEA9 526 aa19.3■□□□□ 0.68
SNX2-205ENST00000506874 NEDD1Q8NHV4 660 aa19.3■□□□□ 0.68
SNX2-205ENST00000506874 PI4K2BQ8TCG2 481 aa19.3■□□□□ 0.68
SNX2-205ENST00000506874 STARD7Q9NQZ5 370 aa19.3■□□□□ 0.68
SNX2-205ENST00000506874 TMEM39AQ9NV64 488 aa19.3■□□□□ 0.68
SNX2-205ENST00000506874 MYADML2A6NDP7 307 aa19.29■□□□□ 0.68
SNX2-205ENST00000506874 SLC3A2P08195 630 aaKnown RBP19.29■□□□□ 0.68
SNX2-205ENST00000506874 IRX5P78411 483 aaPredicted RBP19.29■□□□□ 0.68
SNX2-205ENST00000506874 PPARAQ07869 468 aa19.29■□□□□ 0.68
SNX2-205ENST00000506874 KCNA10Q16322 511 aa19.29■□□□□ 0.68
SNX2-205ENST00000506874 ZMYM1Q5SVZ6 1142 aa19.29■□□□□ 0.68
SNX2-205ENST00000506874 TSEN34Q9BSV6 310 aaKnown RBP19.29■□□□□ 0.68
SNX2-205ENST00000506874 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.29■□□□□ 0.68
SNX2-205ENST00000506874 KIAA0355O15063 1070 aa19.28■□□□□ 0.68
SNX2-205ENST00000506874 C6orf222P0C671 652 aaPredicted RBP19.28■□□□□ 0.68
SNX2-205ENST00000506874 EPHB4P54760 987 aa19.28■□□□□ 0.68
SNX2-205ENST00000506874 IKQ13123 557 aaPredicted RBP19.28■□□□□ 0.68
SNX2-205ENST00000506874 ACVR2BQ13705 512 aa19.28■□□□□ 0.68
SNX2-205ENST00000506874 CCDC129Q6ZRS4 1044 aa19.28■□□□□ 0.68
SNX2-205ENST00000506874 KLHDC9Q8NEP7 349 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms