RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 USP14P54578 494 aa10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 TROAPQ12815 778 aa10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 CATSPERGQ6ZRH7 1159 aa10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 FASTKD5Q7L8L6 764 aaKnown RBP10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 CATIPQ7Z7H3 387 aa10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 GMCL1P1Q8NEA9 526 aa10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 KIFC2Q96AC6 838 aa10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 C12orf42Q96LP6 360 aa10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 ASCC2Q9H1I8 757 aaPredicted RBP10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 SH2D4AQ9H788 454 aa10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 AGTPBP1Q9UPW5 1226 aa10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 HPS5Q9UPZ3 1129 aa10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 SLC12A7Q9Y666 1083 aa10.33□□□□□ -0.76
SCAMP1-202ENST00000506858 PTPRFP10586 1907 aa10.32□□□□□ -0.76
SCAMP1-202ENST00000506858 GOLGA8BA8MQT2 603 aa10.32□□□□□ -0.76
SCAMP1-202ENST00000506858 FLOT1O75955 427 aa10.32□□□□□ -0.76
SCAMP1-202ENST00000506858 PLEKHA8P1O95397 391 aa10.32□□□□□ -0.76
SCAMP1-202ENST00000506858 CDC27P30260 824 aa10.32□□□□□ -0.76
SCAMP1-202ENST00000506858 ADD1P35611 737 aaKnown RBP10.32□□□□□ -0.76
SCAMP1-202ENST00000506858 SLC4A3P48751 1232 aa10.32□□□□□ -0.76
SCAMP1-202ENST00000506858 ZNF543Q08ER8 600 aa10.32□□□□□ -0.76
SCAMP1-202ENST00000506858 IKQ13123 557 aaPredicted RBP10.32□□□□□ -0.76
SCAMP1-202ENST00000506858 CCDC178Q5BJE1 867 aa10.32□□□□□ -0.76
SCAMP1-202ENST00000506858 APOA5Q6Q788 366 aa10.32□□□□□ -0.76
SCAMP1-202ENST00000506858 SGMS1Q86VZ5 419 aa10.32□□□□□ -0.76
SCAMP1-202ENST00000506858 PROCA1Q8NCQ7 364 aaPredicted RBP10.32□□□□□ -0.76
SCAMP1-202ENST00000506858 ATG4CQ96DT6 458 aa10.32□□□□□ -0.76
SCAMP1-202ENST00000506858 TBC1D2Q9BYX2 928 aa10.32□□□□□ -0.76
SCAMP1-202ENST00000506858 FAM217BQ9NTX9 383 aaPredicted RBP10.32□□□□□ -0.76
SCAMP1-202ENST00000506858 MAD2L2Q9UI95 211 aa10.32□□□□□ -0.76
SCAMP1-202ENST00000506858 WDR19Q8NEZ3 1342 aa10.31□□□□□ -0.76
SCAMP1-202ENST00000506858 USP17L15C9J2P7 530 aa10.31□□□□□ -0.76
SCAMP1-202ENST00000506858 USP17L13C9JLJ4 530 aa10.31□□□□□ -0.76
SCAMP1-202ENST00000506858 USP17L11C9JVI0 530 aa10.31□□□□□ -0.76
SCAMP1-202ENST00000506858 USP17L18D6R9N7 530 aa10.31□□□□□ -0.76
SCAMP1-202ENST00000506858 USP17L22D6RA61 530 aa10.31□□□□□ -0.76
SCAMP1-202ENST00000506858 USP17L17D6RBQ6 530 aa10.31□□□□□ -0.76
SCAMP1-202ENST00000506858 USP17L19D6RCP7 530 aa10.31□□□□□ -0.76
SCAMP1-202ENST00000506858 USP17L20D6RJB6 530 aa10.31□□□□□ -0.76
SCAMP1-202ENST00000506858 WDR46O15213 610 aaKnown RBP10.31□□□□□ -0.76
SCAMP1-202ENST00000506858 ZBTB43O43298 467 aa10.31□□□□□ -0.76
SCAMP1-202ENST00000506858 PARP1P09874 1014 aaKnown RBP10.31□□□□□ -0.76
SCAMP1-202ENST00000506858 SNHG28P0DPA3 235 aa10.31□□□□□ -0.76
SCAMP1-202ENST00000506858 PDIA3P30101 505 aaKnown RBP10.31□□□□□ -0.76
SCAMP1-202ENST00000506858 MAP2K2P36507 400 aa10.31□□□□□ -0.76
SCAMP1-202ENST00000506858 IRX3P78415 501 aaPredicted RBP10.31□□□□□ -0.76
SCAMP1-202ENST00000506858 USP17L24Q0WX57 530 aa10.31□□□□□ -0.76
SCAMP1-202ENST00000506858 CRHR2Q13324 411 aa10.31□□□□□ -0.76
SCAMP1-202ENST00000506858 GRM4Q14833 912 aa10.31□□□□□ -0.76
SCAMP1-202ENST00000506858 RABEP1Q15276 862 aa10.31□□□□□ -0.76
SCAMP1-202ENST00000506858 TAF1CQ15572 869 aaPredicted RBP10.31□□□□□ -0.76
SCAMP1-202ENST00000506858 ANKRD23Q86SG2 305 aa10.31□□□□□ -0.76
SCAMP1-202ENST00000506858 GMCL1Q96IK5 515 aa10.31□□□□□ -0.76
SCAMP1-202ENST00000506858 PAGR1Q9BTK6 254 aa10.31□□□□□ -0.76
SCAMP1-202ENST00000506858 AGXT2Q9BYV1 514 aa10.31□□□□□ -0.76
SCAMP1-202ENST00000506858 TXNRD2Q9NNW7 524 aa10.31□□□□□ -0.76
SCAMP1-202ENST00000506858 RNF186Q9NXI6 227 aa10.31□□□□□ -0.76
SCAMP1-202ENST00000506858 CPA4Q9UI42 421 aa10.31□□□□□ -0.76
SCAMP1-202ENST00000506858 PALM3A6NDB9 673 aaPredicted RBP10.3□□□□□ -0.76
SCAMP1-202ENST00000506858 GOLGA8AA7E2F4 631 aa10.3□□□□□ -0.76
SCAMP1-202ENST00000506858 KLRF2D3W0D1 207 aa10.3□□□□□ -0.76
SCAMP1-202ENST00000506858 RIOK3O14730 519 aaKnown RBP10.3□□□□□ -0.76
SCAMP1-202ENST00000506858 SREBF2Q12772 1141 aa10.3□□□□□ -0.76
SCAMP1-202ENST00000506858 ME3Q16798 604 aa10.3□□□□□ -0.76
SCAMP1-202ENST00000506858 CCDC174Q6PII3 467 aa10.3□□□□□ -0.76
SCAMP1-202ENST00000506858 TMTC2Q8N394 836 aa10.3□□□□□ -0.76
SCAMP1-202ENST00000506858 SRBD1Q8N5C6 995 aaKnown RBP10.3□□□□□ -0.76
SCAMP1-202ENST00000506858 FANCBQ8NB91 859 aa10.3□□□□□ -0.76
SCAMP1-202ENST00000506858 DCAF4Q8WV16 495 aa10.3□□□□□ -0.76
SCAMP1-202ENST00000506858 LPAR1Q92633 364 aa10.3□□□□□ -0.76
SCAMP1-202ENST00000506858 PRR12Q9ULL5 1215 aa10.3□□□□□ -0.76
SCAMP1-202ENST00000506858 SPDYE16A6NNV3 312 aaPredicted RBP10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 CYTH3O43739 400 aa10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 DHX16O60231 1041 aaKnown RBP10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 OSBPP22059 807 aa10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 HOXA7P31268 230 aaPredicted RBP10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 NT5C2P49902 561 aa10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 HERVK_113P62684 666 aa10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 ST3GAL1Q11201 340 aa10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 COG2Q14746 738 aa10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 RTN1Q16799 776 aa10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 Q3C1V9 767 aa10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 PPP4R3BQ5MIZ7 849 aa10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 SYDE2Q5VT97 1194 aa10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 SYNE3Q6ZMZ3 975 aa10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 CPXCR1Q8N123 301 aa10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 ANKRD13CQ8N6S4 541 aa10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 SLF1Q9BQI6 1058 aa10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 MTA3Q9BTC8 594 aa10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 BTBD7Q9P203 1132 aa10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 RBPJLQ9UBG7 517 aa10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 POTEB2H3BUK9 544 aa10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 CNMDO75829 334 aa10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 DDAH1O94760 285 aa10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 METAP2P50579 478 aaKnown RBP eCLIP10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 INHBEP58166 350 aa10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 IRX5P78411 483 aaPredicted RBP10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 CAP1Q01518 475 aa10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 HOMER1Q86YM7 354 aa10.29□□□□□ -0.76
SCAMP1-202ENST00000506858 ADGRF4Q8IZF3 695 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms