RNA–Protein interactions for RNA: ENST00000506609.2

ZNF550-206, Transcript of zinc finger protein 550, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ZNF550, Length 1,361 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-206ENST00000506609 SAMD1Q6SPF0 538 aaPredicted RBP12.16□□□□□ -0.46
ZNF550-206ENST00000506609 PRPF38AQ8NAV1 312 aaKnown RBP12.16□□□□□ -0.46
ZNF550-206ENST00000506609 TRIM43Q96BQ3 446 aaPredicted RBP12.16□□□□□ -0.46
ZNF550-206ENST00000506609 SLF1Q9BQI6 1058 aa12.16□□□□□ -0.46
ZNF550-206ENST00000506609 TSEN34Q9BSV6 310 aaKnown RBP12.16□□□□□ -0.46
ZNF550-206ENST00000506609 TEX13BQ9BXU2 312 aa12.16□□□□□ -0.46
ZNF550-206ENST00000506609 BCL11AQ9H165 835 aa12.16□□□□□ -0.46
ZNF550-206ENST00000506609 PRDM5Q9NQX1 630 aaPredicted RBP12.16□□□□□ -0.46
ZNF550-206ENST00000506609 NYAP2Q9P242 653 aa12.16□□□□□ -0.46
ZNF550-206ENST00000506609 ATP2A1O14983 1001 aa12.15□□□□□ -0.46
ZNF550-206ENST00000506609 KIAA0355O15063 1070 aa12.15□□□□□ -0.46
ZNF550-206ENST00000506609 RASA1P20936 1047 aa12.15□□□□□ -0.46
ZNF550-206ENST00000506609 C9orf50Q5SZB4 431 aa12.15□□□□□ -0.46
ZNF550-206ENST00000506609 MAMDC4Q6UXC1 1216 aa12.15□□□□□ -0.46
ZNF550-206ENST00000506609 SH3RF1Q7Z6J0 888 aa12.15□□□□□ -0.46
ZNF550-206ENST00000506609 TOX2Q96NM4 488 aa12.15□□□□□ -0.46
ZNF550-206ENST00000506609 MKNK2Q9HBH9 465 aa12.15□□□□□ -0.46
ZNF550-206ENST00000506609 ECHDC1Q9NTX5 307 aa12.15□□□□□ -0.46
ZNF550-206ENST00000506609 SYNPO2Q9UMS6 1093 aa12.15□□□□□ -0.46
ZNF550-206ENST00000506609 CNPY2Q9Y2B0 182 aa12.15□□□□□ -0.46
ZNF550-206ENST00000506609 SYNGAP1Q96PV0 1343 aa12.14□□□□□ -0.47
ZNF550-206ENST00000506609 DNAJC25-GNG10A0A024R161 153 aa12.14□□□□□ -0.47
ZNF550-206ENST00000506609 A0A1W2PQ45 241 aaPredicted RBP12.14□□□□□ -0.47
ZNF550-206ENST00000506609 A0A1W2PQY0 241 aa12.14□□□□□ -0.47
ZNF550-206ENST00000506609 GSG1L2A8MUP6 293 aa12.14□□□□□ -0.47
ZNF550-206ENST00000506609 F5H6K3 240 aa12.14□□□□□ -0.47
ZNF550-206ENST00000506609 RAD21O60216 631 aa12.14□□□□□ -0.47
ZNF550-206ENST00000506609 PGK1P00558 417 aa12.14□□□□□ -0.47
ZNF550-206ENST00000506609 CLTBP09497 229 aa12.14□□□□□ -0.47
ZNF550-206ENST00000506609 TAL1P17542 331 aaPredicted RBP12.14□□□□□ -0.47
ZNF550-206ENST00000506609 KLRC3Q07444 240 aa12.14□□□□□ -0.47
ZNF550-206ENST00000506609 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.14□□□□□ -0.47
ZNF550-206ENST00000506609 ANKRD33Q7Z3H0 272 aa12.14□□□□□ -0.47
ZNF550-206ENST00000506609 ZNF467Q7Z7K2 595 aaPredicted RBP12.14□□□□□ -0.47
ZNF550-206ENST00000506609 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.14□□□□□ -0.47
ZNF550-206ENST00000506609 KBTBD3Q8NAB2 608 aa12.14□□□□□ -0.47
ZNF550-206ENST00000506609 MKL1Q969V6 931 aa12.14□□□□□ -0.47
ZNF550-206ENST00000506609 SEMA6BQ9H3T3 888 aa12.14□□□□□ -0.47
ZNF550-206ENST00000506609 ZNF287Q9HBT7 754 aa12.14□□□□□ -0.47
ZNF550-206ENST00000506609 SPTBN5Q9NRC6 3674 aaKnown RBP12.13□□□□□ -0.47
ZNF550-206ENST00000506609 MCM3APO60318 1980 aa12.13□□□□□ -0.47
ZNF550-206ENST00000506609 ADAMTS4O75173 837 aa12.13□□□□□ -0.47
ZNF550-206ENST00000506609 ZFYP08048 801 aaPredicted RBP12.13□□□□□ -0.47
ZNF550-206ENST00000506609 GNAT2P19087 354 aa12.13□□□□□ -0.47
ZNF550-206ENST00000506609 SNRNP48Q6IEG0 339 aaKnown RBP12.13□□□□□ -0.47
ZNF550-206ENST00000506609 NUP133Q8WUM0 1156 aa12.13□□□□□ -0.47
ZNF550-206ENST00000506609 DDX11Q96FC9 970 aa12.13□□□□□ -0.47
ZNF550-206ENST00000506609 GPATCH3Q96I76 525 aa12.13□□□□□ -0.47
ZNF550-206ENST00000506609 FAM161BQ96MY7 647 aa12.13□□□□□ -0.47
ZNF550-206ENST00000506609 CDX2Q99626 313 aaPredicted RBP12.13□□□□□ -0.47
ZNF550-206ENST00000506609 FAM184BQ9ULE4 1060 aa12.13□□□□□ -0.47
ZNF550-206ENST00000506609 TMEM265A0A087WTH1 108 aa12.12□□□□□ -0.47
ZNF550-206ENST00000506609 IGKV6D-41A0A0C4DH26 115 aa12.12□□□□□ -0.47
ZNF550-206ENST00000506609 MOXD2PA6NHM9 499 aa12.12□□□□□ -0.47
ZNF550-206ENST00000506609 MINDY4BA8MYZ0 360 aa12.12□□□□□ -0.47
ZNF550-206ENST00000506609 RNF113AO15541 343 aaKnown RBP12.12□□□□□ -0.47
ZNF550-206ENST00000506609 ZBED4O75132 1171 aa12.12□□□□□ -0.47
ZNF550-206ENST00000506609 DUSP11O75319 330 aaKnown RBP12.12□□□□□ -0.47
ZNF550-206ENST00000506609 SNAI1O95863 264 aaPredicted RBP12.12□□□□□ -0.47
ZNF550-206ENST00000506609 NDUFB10O96000 172 aa12.12□□□□□ -0.47
ZNF550-206ENST00000506609 ACLYP53396 1101 aa12.12□□□□□ -0.47
ZNF550-206ENST00000506609 OAZ1P54368 228 aa12.12□□□□□ -0.47
ZNF550-206ENST00000506609 CENPQQ7L2Z9 268 aaPredicted RBP12.12□□□□□ -0.47
ZNF550-206ENST00000506609 KLHDC9Q8NEP7 349 aa12.12□□□□□ -0.47
ZNF550-206ENST00000506609 APPBP2Q92624 585 aa12.12□□□□□ -0.47
ZNF550-206ENST00000506609 NUP88Q99567 741 aaPredicted RBP12.12□□□□□ -0.47
ZNF550-206ENST00000506609 RIPK3Q9Y572 518 aa12.12□□□□□ -0.47
ZNF550-206ENST00000506609 SYNRGQ9UMZ2 1314 aa12.12□□□□□ -0.47
ZNF550-206ENST00000506609 DCDC2CA8MYV0 355 aa12.11□□□□□ -0.47
ZNF550-206ENST00000506609 SMARCA5O60264 1052 aaPredicted RBP12.11□□□□□ -0.47
ZNF550-206ENST00000506609 PQBP1O60828 265 aaKnown RBP12.11□□□□□ -0.47
ZNF550-206ENST00000506609 FDX1P10109 184 aa12.11□□□□□ -0.47
ZNF550-206ENST00000506609 RAG1P15918 1043 aa12.11□□□□□ -0.47
ZNF550-206ENST00000506609 ITGB8P26012 769 aa12.11□□□□□ -0.47
ZNF550-206ENST00000506609 CST5P28325 142 aaPredicted RBP12.11□□□□□ -0.47
ZNF550-206ENST00000506609 FAAP100Q0VG06 881 aa12.11□□□□□ -0.47
ZNF550-206ENST00000506609 LRRFIP1Q32MZ4 808 aaKnown RBP12.11□□□□□ -0.47
ZNF550-206ENST00000506609 CCSAPQ6IQ19 270 aaPredicted RBP12.11□□□□□ -0.47
ZNF550-206ENST00000506609 ZNF444Q8N0Y2 327 aaPredicted RBP12.11□□□□□ -0.47
ZNF550-206ENST00000506609 GMCL1P1Q8NEA9 526 aa12.11□□□□□ -0.47
ZNF550-206ENST00000506609 OSBP2Q969R2 916 aa12.11□□□□□ -0.47
ZNF550-206ENST00000506609 COL25A1Q9BXS0 654 aaPredicted RBP12.11□□□□□ -0.47
ZNF550-206ENST00000506609 ABHD16BQ9H3Z7 469 aa12.11□□□□□ -0.47
ZNF550-206ENST00000506609 DCTPP1Q9H773 170 aa12.11□□□□□ -0.47
ZNF550-206ENST00000506609 SLC38A10Q9HBR0 1119 aa12.11□□□□□ -0.47
ZNF550-206ENST00000506609 TMEM39AQ9NV64 488 aa12.11□□□□□ -0.47
ZNF550-206ENST00000506609 MTMR4Q9NYA4 1195 aa12.11□□□□□ -0.47
ZNF550-206ENST00000506609 CLIP2Q9UDT6 1046 aa12.11□□□□□ -0.47
ZNF550-206ENST00000506609 FBXO40Q9UH90 709 aa12.11□□□□□ -0.47
ZNF550-206ENST00000506609 FEM1BQ9UK73 627 aa12.11□□□□□ -0.47
ZNF550-206ENST00000506609 ELP1O95163 1332 aa12.11□□□□□ -0.47
ZNF550-206ENST00000506609 TRANK1O15050 2925 aa12.11□□□□□ -0.47
ZNF550-206ENST00000506609 PATL2C9JE40 543 aaKnown RBP12.1□□□□□ -0.47
ZNF550-206ENST00000506609 GPAA1O43292 621 aa12.1□□□□□ -0.47
ZNF550-206ENST00000506609 TTLL1O95922 423 aa12.1□□□□□ -0.47
ZNF550-206ENST00000506609 FPGSQ05932 587 aa12.1□□□□□ -0.47
ZNF550-206ENST00000506609 ACVR2BQ13705 512 aa12.1□□□□□ -0.47
ZNF550-206ENST00000506609 KCNA10Q16322 511 aa12.1□□□□□ -0.47
ZNF550-206ENST00000506609 PCSK9Q8NBP7 692 aaKnown RBP12.1□□□□□ -0.47
ZNF550-206ENST00000506609 CHST13Q8NET6 341 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms