RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 PRAMEF19Q5SWL8 479 aa19.89■□□□□ 0.77
PDLIM7-215ENST00000506161 CCDC171Q6TFL3 1326 aa19.89■□□□□ 0.77
PDLIM7-215ENST00000506161 TRMT44Q8IYL2 757 aaKnown RBP19.89■□□□□ 0.77
PDLIM7-215ENST00000506161 DEFB123Q8N688 67 aa19.89■□□□□ 0.77
PDLIM7-215ENST00000506161 SLF1Q9BQI6 1058 aa19.89■□□□□ 0.77
PDLIM7-215ENST00000506161 LAMA3Q16787 3333 aa19.89■□□□□ 0.77
PDLIM7-215ENST00000506161 TTLL1O95922 423 aa19.88■□□□□ 0.77
PDLIM7-215ENST00000506161 ANO1Q5XXA6 986 aa19.88■□□□□ 0.77
PDLIM7-215ENST00000506161 TBC1D10CQ8IV04 446 aa19.88■□□□□ 0.77
PDLIM7-215ENST00000506161 MROH8Q9H579 483 aa19.88■□□□□ 0.77
PDLIM7-215ENST00000506161 STXBP5LQ9Y2K9 1186 aa19.88■□□□□ 0.77
PDLIM7-215ENST00000506161 GSPT1P15170 499 aaKnown RBP19.87■□□□□ 0.77
PDLIM7-215ENST00000506161 TAL1P17542 331 aaPredicted RBP19.87■□□□□ 0.77
PDLIM7-215ENST00000506161 STAT3P40763 770 aa19.87■□□□□ 0.77
PDLIM7-215ENST00000506161 SLFN13Q68D06 897 aa19.87■□□□□ 0.77
PDLIM7-215ENST00000506161 DPP9Q86TI2 863 aa19.87■□□□□ 0.77
PDLIM7-215ENST00000506161 GMCL1P1Q8NEA9 526 aa19.87■□□□□ 0.77
PDLIM7-215ENST00000506161 MAML3Q96JK9 1138 aa19.87■□□□□ 0.77
PDLIM7-215ENST00000506161 LRRC37A2A6NM11 1700 aa19.86■□□□□ 0.77
PDLIM7-215ENST00000506161 STRNO43815 780 aa19.86■□□□□ 0.77
PDLIM7-215ENST00000506161 COL6A1P12109 1028 aa19.86■□□□□ 0.77
PDLIM7-215ENST00000506161 BMP8BP34820 402 aa19.86■□□□□ 0.77
PDLIM7-215ENST00000506161 NOVP48745 357 aa19.86■□□□□ 0.77
PDLIM7-215ENST00000506161 MFSD14CQ5VZR4 134 aa19.86■□□□□ 0.77
PDLIM7-215ENST00000506161 OLFML2BQ68BL8 750 aa19.86■□□□□ 0.77
PDLIM7-215ENST00000506161 ANKLE1Q8NAG6 615 aa19.86■□□□□ 0.77
PDLIM7-215ENST00000506161 KIFC2Q96AC6 838 aa19.86■□□□□ 0.77
PDLIM7-215ENST00000506161 RAVER2Q9HCJ3 691 aaKnown RBP19.86■□□□□ 0.77
PDLIM7-215ENST00000506161 ZMYM6O95789 1325 aa19.85■□□□□ 0.77
PDLIM7-215ENST00000506161 TSPY2A6NKD2 308 aa19.85■□□□□ 0.77
PDLIM7-215ENST00000506161 ORC4O43929 436 aa19.85■□□□□ 0.77
PDLIM7-215ENST00000506161 SNAP25P60880 206 aa19.85■□□□□ 0.77
PDLIM7-215ENST00000506161 ZNF792Q3KQV3 632 aa19.85■□□□□ 0.77
PDLIM7-215ENST00000506161 SNRNP48Q6IEG0 339 aaKnown RBP19.85■□□□□ 0.77
PDLIM7-215ENST00000506161 Q7L0L9 218 aa19.85■□□□□ 0.77
PDLIM7-215ENST00000506161 NECAB2Q7Z6G3 386 aa19.85■□□□□ 0.77
PDLIM7-215ENST00000506161 CPXCR1Q8N123 301 aa19.85■□□□□ 0.77
PDLIM7-215ENST00000506161 MMP19Q99542 508 aa19.85■□□□□ 0.77
PDLIM7-215ENST00000506161 GDF15Q99988 308 aa19.85■□□□□ 0.77
PDLIM7-215ENST00000506161 ZNF287Q9HBT7 754 aa19.85■□□□□ 0.77
PDLIM7-215ENST00000506161 DDX20Q9UHI6 824 aaKnown RBP19.85■□□□□ 0.77
PDLIM7-215ENST00000506161 ZNF536O15090 1300 aa19.84■□□□□ 0.77
PDLIM7-215ENST00000506161 NEDD4P46934 1319 aa19.84■□□□□ 0.77
PDLIM7-215ENST00000506161 RANBP6O60518 1105 aaKnown RBP19.84■□□□□ 0.77
PDLIM7-215ENST00000506161 SLC25A27O95847 323 aa19.84■□□□□ 0.77
PDLIM7-215ENST00000506161 MCCP23508 829 aa19.84■□□□□ 0.77
PDLIM7-215ENST00000506161 RRP12Q5JTH9 1297 aaKnown RBP19.84■□□□□ 0.77
PDLIM7-215ENST00000506161 CWC27Q6UX04 472 aaKnown RBP19.84■□□□□ 0.77
PDLIM7-215ENST00000506161 KCTD1Q719H9 257 aa19.84■□□□□ 0.77
PDLIM7-215ENST00000506161 ABRAQ8N0Z2 381 aa19.84■□□□□ 0.77
PDLIM7-215ENST00000506161 PRPF38AQ8NAV1 312 aaKnown RBP19.84■□□□□ 0.77
PDLIM7-215ENST00000506161 FGD4Q96M96 766 aa19.84■□□□□ 0.77
PDLIM7-215ENST00000506161 C11orf49Q9H6J7 331 aa19.84■□□□□ 0.77
PDLIM7-215ENST00000506161 SLC38A10Q9HBR0 1119 aa19.84■□□□□ 0.77
PDLIM7-215ENST00000506161 TMEM232C9JQI7 657 aa19.83■□□□□ 0.77
PDLIM7-215ENST00000506161 SLC3A2P08195 630 aaKnown RBP19.83■□□□□ 0.77
PDLIM7-215ENST00000506161 FCER1AP12319 257 aa19.83■□□□□ 0.77
PDLIM7-215ENST00000506161 BMP3P12645 472 aa19.83■□□□□ 0.77
PDLIM7-215ENST00000506161 CNGA1P29973 690 aa19.83■□□□□ 0.77
PDLIM7-215ENST00000506161 SLC4A3P48751 1232 aa19.83■□□□□ 0.77
PDLIM7-215ENST00000506161 COL25A1Q9BXS0 654 aaPredicted RBP19.83■□□□□ 0.77
PDLIM7-215ENST00000506161 STX8Q9UNK0 236 aa19.83■□□□□ 0.77
PDLIM7-215ENST00000506161 MTMR7Q9Y216 660 aa19.83■□□□□ 0.77
PDLIM7-215ENST00000506161 ATP2A1O14983 1001 aa19.82■□□□□ 0.76
PDLIM7-215ENST00000506161 LRRC26Q2I0M4 334 aa19.82■□□□□ 0.76
PDLIM7-215ENST00000506161 LRIT3Q3SXY7 679 aa19.82■□□□□ 0.76
PDLIM7-215ENST00000506161 TTBK2Q6IQ55 1244 aa19.82■□□□□ 0.76
PDLIM7-215ENST00000506161 RCSD1Q6JBY9 416 aa19.82■□□□□ 0.76
PDLIM7-215ENST00000506161 C7orf61Q8IZ16 206 aa19.82■□□□□ 0.76
PDLIM7-215ENST00000506161 LENG1Q96BZ8 264 aaPredicted RBP19.82■□□□□ 0.76
PDLIM7-215ENST00000506161 TEX13BQ9BXU2 312 aa19.82■□□□□ 0.76
PDLIM7-215ENST00000506161 FEM1BQ9UK73 627 aa19.82■□□□□ 0.76
PDLIM7-215ENST00000506161 SYNPO2Q9UMS6 1093 aa19.82■□□□□ 0.76
PDLIM7-215ENST00000506161 DNAJC25-GNG10A0A024R161 153 aa19.81■□□□□ 0.76
PDLIM7-215ENST00000506161 TTC22Q5TAA0 569 aa19.81■□□□□ 0.76
PDLIM7-215ENST00000506161 GMCL1Q96IK5 515 aa19.81■□□□□ 0.76
PDLIM7-215ENST00000506161 TOMM22Q9NS69 142 aa19.81■□□□□ 0.76
PDLIM7-215ENST00000506161 MTMR10Q9NXD2 777 aa19.81■□□□□ 0.76
PDLIM7-215ENST00000506161 ZMYND8Q9ULU4 1186 aaPredicted RBP19.81■□□□□ 0.76
PDLIM7-215ENST00000506161 LTBP2Q14767 1821 aa19.81■□□□□ 0.76
PDLIM7-215ENST00000506161 SYN1P17600 705 aa19.8■□□□□ 0.76
PDLIM7-215ENST00000506161 GJC2Q5T442 439 aaPredicted RBP19.8■□□□□ 0.76
PDLIM7-215ENST00000506161 SKAP1Q86WV1 359 aa19.8■□□□□ 0.76
PDLIM7-215ENST00000506161 TICAM2Q86XR7 235 aa19.8■□□□□ 0.76
PDLIM7-215ENST00000506161 STAG1Q8WVM7 1258 aa19.8■□□□□ 0.76
PDLIM7-215ENST00000506161 AGBL1Q96MI9 1066 aa19.8■□□□□ 0.76
PDLIM7-215ENST00000506161 TMEM47Q9BQJ4 181 aa19.8■□□□□ 0.76
PDLIM7-215ENST00000506161 DDX49Q9Y6V7 483 aaKnown RBP19.8■□□□□ 0.76
PDLIM7-215ENST00000506161 SLC1A4P43007 532 aa19.79■□□□□ 0.76
PDLIM7-215ENST00000506161 KCTD2Q14681 263 aa19.79■□□□□ 0.76
PDLIM7-215ENST00000506161 AKNAD1Q5T1N1 836 aa19.79■□□□□ 0.76
PDLIM7-215ENST00000506161 ZKSCAN3Q9BRR0 538 aa19.79■□□□□ 0.76
PDLIM7-215ENST00000506161 DIAPH3Q9NSV4 1193 aa19.79■□□□□ 0.76
PDLIM7-215ENST00000506161 SEPT4O43236 478 aa19.78■□□□□ 0.76
PDLIM7-215ENST00000506161 ZBED4O75132 1171 aa19.78■□□□□ 0.76
PDLIM7-215ENST00000506161 SNAI1O95863 264 aaPredicted RBP19.78■□□□□ 0.76
PDLIM7-215ENST00000506161 ZNF865P0CJ78 1059 aaPredicted RBP19.78■□□□□ 0.76
PDLIM7-215ENST00000506161 SLC16A2P36021 539 aa19.78■□□□□ 0.76
PDLIM7-215ENST00000506161 STAT2P52630 851 aa19.78■□□□□ 0.76
PDLIM7-215ENST00000506161 IRX5P78411 483 aaPredicted RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms