RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 USP14P54578 494 aa13.38□□□□□ -0.27
UBE3D-206ENST00000505226 CHRNDQ07001 517 aa13.38□□□□□ -0.27
UBE3D-206ENST00000505226 NAALADL2Q58DX5 795 aa13.38□□□□□ -0.27
UBE3D-206ENST00000505226 MB21D1Q8N884 522 aa13.38□□□□□ -0.27
UBE3D-206ENST00000505226 LACRTQ9GZZ8 138 aa13.38□□□□□ -0.27
UBE3D-206ENST00000505226 FAM204AQ9H8W3 233 aa13.38□□□□□ -0.27
UBE3D-206ENST00000505226 DUSP10Q9Y6W6 482 aa13.38□□□□□ -0.27
UBE3D-206ENST00000505226 BMP15O95972 392 aa13.38□□□□□ -0.27
UBE3D-206ENST00000505226 KLK7P49862 253 aa13.38□□□□□ -0.27
UBE3D-206ENST00000505226 FAM71BQ8TC56 605 aa13.38□□□□□ -0.27
UBE3D-206ENST00000505226 DNAJC7Q99615 494 aa13.38□□□□□ -0.27
UBE3D-206ENST00000505226 HINFPQ9BQA5 517 aa13.38□□□□□ -0.27
UBE3D-206ENST00000505226 RASSF4Q9H2L5 321 aa13.38□□□□□ -0.27
UBE3D-206ENST00000505226 FAM205AQ6ZU69 1335 aa13.38□□□□□ -0.27
UBE3D-206ENST00000505226 ANKRD65E5RJM6 399 aa13.38□□□□□ -0.27
UBE3D-206ENST00000505226 PDE2AO00408 941 aaPredicted RBP13.38□□□□□ -0.27
UBE3D-206ENST00000505226 ZNF185O15231 689 aa13.38□□□□□ -0.27
UBE3D-206ENST00000505226 RPS6KA5O75582 802 aa13.38□□□□□ -0.27
UBE3D-206ENST00000505226 PRPF6O94906 941 aaKnown RBP13.38□□□□□ -0.27
UBE3D-206ENST00000505226 TUBB4BP68371 445 aa13.38□□□□□ -0.27
UBE3D-206ENST00000505226 CTR9Q6PD62 1173 aa13.38□□□□□ -0.27
UBE3D-206ENST00000505226 GSPT2Q8IYD1 628 aaKnown RBP13.38□□□□□ -0.27
UBE3D-206ENST00000505226 OR8K1Q8NGG5 319 aa13.38□□□□□ -0.27
UBE3D-206ENST00000505226 CAPZA3Q96KX2 299 aa13.38□□□□□ -0.27
UBE3D-206ENST00000505226 AGPAT5Q9NUQ2 364 aa13.38□□□□□ -0.27
UBE3D-206ENST00000505226 FAM47AQ5JRC9 791 aa13.37□□□□□ -0.27
UBE3D-206ENST00000505226 LEKR1Q6ZMV7 388 aa13.37□□□□□ -0.27
UBE3D-206ENST00000505226 ADSSL1Q8N142 457 aa13.37□□□□□ -0.27
UBE3D-206ENST00000505226 TSPYL1Q9H0U9 437 aa13.37□□□□□ -0.27
UBE3D-206ENST00000505226 CWC15Q9P013 229 aaKnown RBP13.37□□□□□ -0.27
UBE3D-206ENST00000505226 RSPH14Q9UHP6 348 aa13.37□□□□□ -0.27
UBE3D-206ENST00000505226 FGRP09769 529 aa13.37□□□□□ -0.27
UBE3D-206ENST00000505226 SPAG1Q07617 926 aa13.37□□□□□ -0.27
UBE3D-206ENST00000505226 CACNA1SQ13698 1873 aa13.37□□□□□ -0.27
UBE3D-206ENST00000505226 RASGRP4Q8TDF6 673 aa13.37□□□□□ -0.27
UBE3D-206ENST00000505226 BCL9O00512 1426 aa13.37□□□□□ -0.27
UBE3D-206ENST00000505226 RNF40O75150 1001 aa13.37□□□□□ -0.27
UBE3D-206ENST00000505226 NLRP5P59047 1200 aa13.37□□□□□ -0.27
UBE3D-206ENST00000505226 TRIM14Q14142 442 aa13.37□□□□□ -0.27
UBE3D-206ENST00000505226 PAPD7Q5XG87 772 aaKnown RBP13.37□□□□□ -0.27
UBE3D-206ENST00000505226 PLIN2Q99541 437 aa13.37□□□□□ -0.27
UBE3D-206ENST00000505226 RBM28Q9NW13 759 aaKnown RBP13.37□□□□□ -0.27
UBE3D-206ENST00000505226 HPCAL4Q9UM19 191 aa13.37□□□□□ -0.27
UBE3D-206ENST00000505226 LGALS16A8MUM7 142 aa13.36□□□□□ -0.27
UBE3D-206ENST00000505226 KLRC4O43908 158 aa13.36□□□□□ -0.27
UBE3D-206ENST00000505226 CCDC122Q5T0U0 273 aa13.36□□□□□ -0.27
UBE3D-206ENST00000505226 CCDC148Q8NFR7 591 aa13.36□□□□□ -0.27
UBE3D-206ENST00000505226 BRMS1Q9HCU9 246 aa13.36□□□□□ -0.27
UBE3D-206ENST00000505226 CAPN11Q9UMQ6 739 aa13.36□□□□□ -0.27
UBE3D-206ENST00000505226 SAR1BQ9Y6B6 198 aa13.36□□□□□ -0.27
UBE3D-206ENST00000505226 USP17L12C9JPN9 530 aa13.36□□□□□ -0.27
UBE3D-206ENST00000505226 USP17L21D6R901 530 aa13.36□□□□□ -0.27
UBE3D-206ENST00000505226 H7C1D1 291 aa13.36□□□□□ -0.27
UBE3D-206ENST00000505226 SCG2P13521 617 aa13.36□□□□□ -0.27
UBE3D-206ENST00000505226 IL6STP40189 918 aaPredicted RBP13.36□□□□□ -0.27
UBE3D-206ENST00000505226 AARSP49588 968 aaKnown RBP eCLIP13.36□□□□□ -0.27
UBE3D-206ENST00000505226 GBP3Q9H0R5 595 aa13.36□□□□□ -0.27
UBE3D-206ENST00000505226 HAUS4Q9H6D7 363 aa13.36□□□□□ -0.27
UBE3D-206ENST00000505226 LUC7L2Q9Y383 392 aaKnown RBP13.36□□□□□ -0.27
UBE3D-206ENST00000505226 PES1O00541 588 aaKnown RBP13.35□□□□□ -0.27
UBE3D-206ENST00000505226 HSP90B2PQ58FF3 399 aa13.35□□□□□ -0.27
UBE3D-206ENST00000505226 TYW1BQ6NUM6 668 aa13.35□□□□□ -0.27
UBE3D-206ENST00000505226 TTYH3Q9C0H2 523 aa13.35□□□□□ -0.27
UBE3D-206ENST00000505226 B4DLN1 442 aa13.35□□□□□ -0.27
UBE3D-206ENST00000505226 AGPSO00116 658 aa13.35□□□□□ -0.27
UBE3D-206ENST00000505226 IQCA1Q86XH1 822 aa13.35□□□□□ -0.27
UBE3D-206ENST00000505226 GPKOWQ92917 476 aaPredicted RBP eCLIP13.35□□□□□ -0.27
UBE3D-206ENST00000505226 TMEM60Q9H2L4 133 aa13.35□□□□□ -0.27
UBE3D-206ENST00000505226 MED4Q9NPJ6 270 aa13.35□□□□□ -0.27
UBE3D-206ENST00000505226 GNL3LQ9NVN8 582 aaKnown RBP13.35□□□□□ -0.27
UBE3D-206ENST00000505226 ZNF804BA4D1E1 1349 aa13.35□□□□□ -0.27
UBE3D-206ENST00000505226 CYP2D6P10635 497 aa13.35□□□□□ -0.27
UBE3D-206ENST00000505226 PFKFB3Q16875 520 aaPredicted RBP13.35□□□□□ -0.27
UBE3D-206ENST00000505226 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.35□□□□□ -0.27
UBE3D-206ENST00000505226 PDS5AQ29RF7 1337 aaKnown RBP13.34□□□□□ -0.27
UBE3D-206ENST00000505226 DLEC1Q9Y238 1755 aa13.34□□□□□ -0.27
UBE3D-206ENST00000505226 DDAH1O94760 285 aa13.34□□□□□ -0.27
UBE3D-206ENST00000505226 STAT6P42226 847 aa13.34□□□□□ -0.27
UBE3D-206ENST00000505226 CYP27A1Q02318 531 aa13.34□□□□□ -0.27
UBE3D-206ENST00000505226 MEA1Q16626 185 aa13.34□□□□□ -0.27
UBE3D-206ENST00000505226 ANKRD20A12PQ8NF67 263 aa13.34□□□□□ -0.27
UBE3D-206ENST00000505226 JAKMIP2Q96AA8 810 aa13.34□□□□□ -0.27
UBE3D-206ENST00000505226 DUSP9Q99956 384 aaKnown RBP13.34□□□□□ -0.27
UBE3D-206ENST00000505226 DISC1Q9NRI5 854 aa13.34□□□□□ -0.27
UBE3D-206ENST00000505226 ZNF263O14978 683 aa13.34□□□□□ -0.27
UBE3D-206ENST00000505226 IVLP07476 585 aa13.34□□□□□ -0.27
UBE3D-206ENST00000505226 GGCXP38435 758 aa13.34□□□□□ -0.27
UBE3D-206ENST00000505226 TNNT3P45378 269 aaPredicted RBP13.34□□□□□ -0.27
UBE3D-206ENST00000505226 EIF5P55010 431 aaKnown RBP13.34□□□□□ -0.27
UBE3D-206ENST00000505226 TTI2Q6NXR4 508 aa13.34□□□□□ -0.27
UBE3D-206ENST00000505226 INTS5Q6P9B9 1019 aaKnown RBP13.34□□□□□ -0.27
UBE3D-206ENST00000505226 BRIP1Q9BX63 1249 aa13.34□□□□□ -0.27
UBE3D-206ENST00000505226 VIPAS39Q9H9C1 493 aa13.34□□□□□ -0.27
UBE3D-206ENST00000505226 RMND1Q9NWS8 449 aa13.34□□□□□ -0.27
UBE3D-206ENST00000505226 TAF1P21675 1872 aa13.33□□□□□ -0.27
UBE3D-206ENST00000505226 A0A1W2PQC6 194 aa13.33□□□□□ -0.27
UBE3D-206ENST00000505226 TUBBP07437 444 aa13.33□□□□□ -0.27
UBE3D-206ENST00000505226 IGHMBP2P38935 993 aaKnown RBP13.33□□□□□ -0.27
UBE3D-206ENST00000505226 TRAPPC10P48553 1259 aa13.33□□□□□ -0.27
UBE3D-206ENST00000505226 RCSD1Q6JBY9 416 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms