RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 ABRAQ8N0Z2 381 aa9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 ZNF713Q8N859 430 aaPredicted RBP9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 FANCBQ8NB91 859 aa9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 CRYGNQ8WXF5 182 aa9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 TRIM34Q9BYJ4 488 aa9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 JMJD4Q9H9V9 463 aa9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 PDRG1Q9NUG6 133 aa9.7□□□□□ -0.86
CDC42SE2-208ENST00000505065 CCL15-CCL14A0A0B4J2E2 113 aa9.69□□□□□ -0.86
CDC42SE2-208ENST00000505065 LOC102724159A0A0B4J2E5 919 aa9.69□□□□□ -0.86
CDC42SE2-208ENST00000505065 CTGFP29279 349 aa9.69□□□□□ -0.86
CDC42SE2-208ENST00000505065 PWP2Q15269 919 aaKnown RBP9.69□□□□□ -0.86
CDC42SE2-208ENST00000505065 CCL15Q16663 113 aa9.69□□□□□ -0.86
CDC42SE2-208ENST00000505065 ME3Q16798 604 aa9.69□□□□□ -0.86
CDC42SE2-208ENST00000505065 FAM110CQ1W6H9 321 aa9.69□□□□□ -0.86
CDC42SE2-208ENST00000505065 PPP1R18Q6NYC8 613 aa9.69□□□□□ -0.86
CDC42SE2-208ENST00000505065 RIOX2Q8IUF8 465 aa9.69□□□□□ -0.86
CDC42SE2-208ENST00000505065 PNMA2Q9UL42 364 aa9.69□□□□□ -0.86
CDC42SE2-208ENST00000505065 PDHXO00330 501 aa9.69□□□□□ -0.86
CDC42SE2-208ENST00000505065 IFIT3O14879 490 aaKnown RBP9.69□□□□□ -0.86
CDC42SE2-208ENST00000505065 SCRN1Q12765 414 aa9.69□□□□□ -0.86
CDC42SE2-208ENST00000505065 RAB3GAP1Q15042 981 aa9.69□□□□□ -0.86
CDC42SE2-208ENST00000505065 TKFCQ3LXA3 575 aa9.69□□□□□ -0.86
CDC42SE2-208ENST00000505065 STAG2Q8N3U4 1231 aa9.69□□□□□ -0.86
CDC42SE2-208ENST00000505065 CLEC4DQ8WXI8 215 aa9.69□□□□□ -0.86
CDC42SE2-208ENST00000505065 BTBD7Q9P203 1132 aa9.69□□□□□ -0.86
CDC42SE2-208ENST00000505065 RPTORQ8N122 1335 aa9.69□□□□□ -0.86
CDC42SE2-208ENST00000505065 PIK3CDO00329 1044 aa9.69□□□□□ -0.86
CDC42SE2-208ENST00000505065 PRPF3O43395 683 aaKnown RBP9.69□□□□□ -0.86
CDC42SE2-208ENST00000505065 MORN1Q5T089 497 aa9.69□□□□□ -0.86
CDC42SE2-208ENST00000505065 LRRC47Q8N1G4 583 aaKnown RBP9.69□□□□□ -0.86
CDC42SE2-208ENST00000505065 FGD4Q96M96 766 aa9.69□□□□□ -0.86
CDC42SE2-208ENST00000505065 ZKSCAN3Q9BRR0 538 aa9.69□□□□□ -0.86
CDC42SE2-208ENST00000505065 UBAC1Q9BSL1 405 aa9.69□□□□□ -0.86
CDC42SE2-208ENST00000505065 BCL11AQ9H165 835 aa9.69□□□□□ -0.86
CDC42SE2-208ENST00000505065 MAP3K20Q9NYL2 800 aaKnown RBP9.69□□□□□ -0.86
CDC42SE2-208ENST00000505065 RABGAP1Q9Y3P9 1069 aa9.69□□□□□ -0.86
CDC42SE2-208ENST00000505065 ESYT2A0FGR8 921 aa9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 PABPC4Q13310 644 aaKnown RBP eCLIP9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 COG2Q14746 738 aa9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 SART3Q15020 963 aaKnown RBP9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 DAGLBQ8NCG7 672 aa9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 SLF1Q9BQI6 1058 aa9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 TXNRD2Q9NNW7 524 aa9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 PRR12Q9ULL5 1215 aa9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 DOCK5Q9H7D0 1870 aa9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 MCM3APO60318 1980 aa9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 FMNL1O95466 1100 aaPredicted RBP9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 ICAM1P05362 532 aa9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 FDPSP14324 419 aaKnown RBP9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 COPB2P35606 906 aa9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 HERVK_113P62684 666 aa9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 FAM83BQ5T0W9 1011 aa9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 PRPF38AQ8NAV1 312 aaKnown RBP9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 SH3GLB2Q9NR46 395 aa9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 SH2B1Q9NRF2 756 aaPredicted RBP9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 TMEM132BQ14DG7 1078 aa9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 ZSCAN31Q96LW9 406 aaPredicted RBP9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 PARK7Q99497 189 aaKnown RBP9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 RNF26Q9BY78 433 aaPredicted RBP9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 TANGO6Q9C0B7 1094 aa9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 R3HDMLQ9H3Y0 253 aa9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 KAT14Q9H8E8 782 aa9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 PNMA3Q9UL41 463 aa9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 TRIM75PA6NK02 468 aa9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 HSD17B4P51659 736 aa9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 NKX3-2P78367 333 aa9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 CHST3Q7LGC8 479 aa9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 ADGRF4Q8IZF3 695 aa9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 INTS4Q96HW7 963 aaKnown RBP9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 P2RX7Q99572 595 aaKnown RBP9.68□□□□□ -0.86
CDC42SE2-208ENST00000505065 ALPK3Q96L96 1907 aa9.67□□□□□ -0.86
CDC42SE2-208ENST00000505065 HOXC6P09630 235 aa9.67□□□□□ -0.86
CDC42SE2-208ENST00000505065 STAT2P52630 851 aa9.67□□□□□ -0.86
CDC42SE2-208ENST00000505065 SYDE2Q5VT97 1194 aa9.67□□□□□ -0.86
CDC42SE2-208ENST00000505065 HOXC10Q9NYD6 342 aa9.67□□□□□ -0.86
CDC42SE2-208ENST00000505065 LIMCH1Q9UPQ0 1083 aa9.67□□□□□ -0.86
CDC42SE2-208ENST00000505065 APOBRQ0VD83 1088 aa9.67□□□□□ -0.86
CDC42SE2-208ENST00000505065 CRHR2Q13324 411 aa9.67□□□□□ -0.86
CDC42SE2-208ENST00000505065 PRKG1Q13976 671 aa9.67□□□□□ -0.86
CDC42SE2-208ENST00000505065 NSUN7Q8NE18 718 aaKnown RBP9.67□□□□□ -0.86
CDC42SE2-208ENST00000505065 TNFRSF25Q93038 417 aa9.67□□□□□ -0.86
CDC42SE2-208ENST00000505065 ZNF408Q9H9D4 720 aa9.67□□□□□ -0.86
CDC42SE2-208ENST00000505065 GJD2Q9UKL4 321 aa9.67□□□□□ -0.86
CDC42SE2-208ENST00000505065 ABT1Q9ULW3 272 aaKnown RBP9.67□□□□□ -0.86
CDC42SE2-208ENST00000505065 MORC2Q9Y6X9 1032 aaPredicted RBP9.67□□□□□ -0.86
CDC42SE2-208ENST00000505065 SIP14410 1827 aa9.67□□□□□ -0.86
CDC42SE2-208ENST00000505065 GNRH1P01148 92 aa9.67□□□□□ -0.86
CDC42SE2-208ENST00000505065 GNAQP50148 359 aa9.67□□□□□ -0.86
CDC42SE2-208ENST00000505065 CATIPQ7Z7H3 387 aa9.67□□□□□ -0.86
CDC42SE2-208ENST00000505065 TMOD4Q9NZQ9 345 aa9.67□□□□□ -0.86
CDC42SE2-208ENST00000505065 MAP2K1Q02750 393 aaPredicted RBP9.66□□□□□ -0.86
CDC42SE2-208ENST00000505065 GRB14Q14449 540 aa9.66□□□□□ -0.86
CDC42SE2-208ENST00000505065 TTBK2Q6IQ55 1244 aa9.66□□□□□ -0.86
CDC42SE2-208ENST00000505065 ZNF467Q7Z7K2 595 aaPredicted RBP9.66□□□□□ -0.86
CDC42SE2-208ENST00000505065 BRF1Q92994 677 aa9.66□□□□□ -0.86
CDC42SE2-208ENST00000505065 MPHOSPH10O00566 681 aaKnown RBP9.66□□□□□ -0.86
CDC42SE2-208ENST00000505065 PLEKHA8P1O95397 391 aa9.66□□□□□ -0.86
CDC42SE2-208ENST00000505065 PARP1P09874 1014 aaKnown RBP9.66□□□□□ -0.86
CDC42SE2-208ENST00000505065 OSBPP22059 807 aa9.66□□□□□ -0.86
CDC42SE2-208ENST00000505065 PFKFB3Q16875 520 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms