RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, human

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM3-218	ENST00000505010	IFNAR1	P17181	557 aa		10.84	□□□□□ -0.67
TPM3-218	ENST00000505010	GUCY1A2	P33402	732 aa		10.84	□□□□□ -0.67
TPM3-218	ENST00000505010	IREB2	P48200	963 aa	Known RBP	10.84	□□□□□ -0.67
TPM3-218	ENST00000505010	JAG1	P78504	1218 aa		10.84	□□□□□ -0.67
TPM3-218	ENST00000505010	AKAP17A	Q02040	695 aa	Known RBP	10.84	□□□□□ -0.67
TPM3-218	ENST00000505010	NBPF12	Q5TAG4	269 aa	Predicted RBP	10.84	□□□□□ -0.67
TPM3-218	ENST00000505010	CCDC82	Q8N4S0	544 aa		10.84	□□□□□ -0.67
TPM3-218	ENST00000505010	PTPN18	Q99952	460 aa		10.84	□□□□□ -0.67
TPM3-218	ENST00000505010	ISY1	Q9ULR0	285 aa	Known RBP	10.84	□□□□□ -0.67
TPM3-218	ENST00000505010	MTMR6	Q9Y217	621 aa		10.84	□□□□□ -0.67
TPM3-218	ENST00000505010	TCHH	Q07283	1943 aa		10.84	□□□□□ -0.67
TPM3-218	ENST00000505010	BAZ2B	Q9UIF8	2168 aa	Known RBP	10.83	□□□□□ -0.68
TPM3-218	ENST00000505010	USP17L5	A8MUK1	530 aa		10.83	□□□□□ -0.68
TPM3-218	ENST00000505010	RAD21	O60216	631 aa		10.83	□□□□□ -0.68
TPM3-218	ENST00000505010	GOLGA8H	P0CJ92	632 aa		10.83	□□□□□ -0.68
TPM3-218	ENST00000505010	GNAQ	P50148	359 aa		10.83	□□□□□ -0.68
TPM3-218	ENST00000505010	GUCY1B3	Q02153	619 aa		10.83	□□□□□ -0.68
TPM3-218	ENST00000505010	CCDC96	Q2M329	555 aa		10.83	□□□□□ -0.68
TPM3-218	ENST00000505010	ANKRD13A	Q8IZ07	590 aa		10.83	□□□□□ -0.68
TPM3-218	ENST00000505010	WASF1	Q92558	559 aa		10.83	□□□□□ -0.68
TPM3-218	ENST00000505010	C8orf76	Q96K31	380 aa		10.83	□□□□□ -0.68
TPM3-218	ENST00000505010	GBP4	Q96PP9	640 aa		10.83	□□□□□ -0.68
TPM3-218	ENST00000505010	MAP3K14	Q99558	947 aa		10.83	□□□□□ -0.68
TPM3-218	ENST00000505010	ALG1	Q9BT22	464 aa		10.83	□□□□□ -0.68
TPM3-218	ENST00000505010	ZNF341	Q9BYN7	854 aa		10.83	□□□□□ -0.68
TPM3-218	ENST00000505010	ZFYVE28	Q9HCC9	887 aa		10.83	□□□□□ -0.68
TPM3-218	ENST00000505010	ARHGEF10L	Q9HCE6	1279 aa		10.83	□□□□□ -0.68
TPM3-218	ENST00000505010	NYAP2	Q9P242	653 aa		10.83	□□□□□ -0.68
TPM3-218	ENST00000505010	MAD2L2	Q9UI95	211 aa		10.83	□□□□□ -0.68
TPM3-218	ENST00000505010	PHIP	Q8WWQ0	1821 aa		10.83	□□□□□ -0.68
TPM3-218	ENST00000505010	FRMPD2	Q68DX3	1309 aa	Predicted RBP	10.83	□□□□□ -0.68
TPM3-218	ENST00000505010	USP2	O75604	605 aa	Predicted RBP	10.82	□□□□□ -0.68
TPM3-218	ENST00000505010	DEXI	O95424	95 aa		10.82	□□□□□ -0.68
TPM3-218	ENST00000505010	F13A1	P00488	732 aa		10.82	□□□□□ -0.68
TPM3-218	ENST00000505010	PDHB	P11177	359 aa		10.82	□□□□□ -0.68
TPM3-218	ENST00000505010	PDIA4	P13667	645 aa	Known RBP	10.82	□□□□□ -0.68
TPM3-218	ENST00000505010	GJA5	P36382	358 aa		10.82	□□□□□ -0.68
TPM3-218	ENST00000505010	CAP2	P40123	477 aa		10.82	□□□□□ -0.68
TPM3-218	ENST00000505010	MNX1	P50219	401 aa	Predicted RBP	10.82	□□□□□ -0.68
TPM3-218	ENST00000505010	MAP3K10	Q02779	954 aa		10.82	□□□□□ -0.68
TPM3-218	ENST00000505010	TRIM29	Q14134	588 aa		10.82	□□□□□ -0.68
TPM3-218	ENST00000505010	ASPRV1	Q53RT3	343 aa		10.82	□□□□□ -0.68
TPM3-218	ENST00000505010	USP17L2	Q6R6M4	530 aa		10.82	□□□□□ -0.68
TPM3-218	ENST00000505010	FERMT3	Q86UX7	667 aa		10.82	□□□□□ -0.68
TPM3-218	ENST00000505010	STAG2	Q8N3U4	1231 aa		10.82	□□□□□ -0.68
TPM3-218	ENST00000505010	SRBD1	Q8N5C6	995 aa	Known RBP	10.82	□□□□□ -0.68
TPM3-218	ENST00000505010	SH3TC2	Q8TF17	1288 aa		10.82	□□□□□ -0.68
TPM3-218	ENST00000505010	PIBF1	Q8WXW3	757 aa		10.82	□□□□□ -0.68
TPM3-218	ENST00000505010	AIFM3	Q96NN9	605 aa		10.82	□□□□□ -0.68
TPM3-218	ENST00000505010	LZTS2	Q9BRK4	669 aa		10.82	□□□□□ -0.68
TPM3-218	ENST00000505010	RNF26	Q9BY78	433 aa	Predicted RBP	10.82	□□□□□ -0.68
TPM3-218	ENST00000505010	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	10.82	□□□□□ -0.68
TPM3-218	ENST00000505010	CUL9	Q8IWT3	2517 aa		10.82	□□□□□ -0.68
TPM3-218	ENST00000505010	hCG_1642624	A0A1W2PR95	340 aa		10.81	□□□□□ -0.68
TPM3-218	ENST00000505010	PALM3	A6NDB9	673 aa	Predicted RBP	10.81	□□□□□ -0.68
TPM3-218	ENST00000505010	PHF20L1	A8MW92	1017 aa		10.81	□□□□□ -0.68
TPM3-218	ENST00000505010	KLRF2	D3W0D1	207 aa		10.81	□□□□□ -0.68
TPM3-218	ENST00000505010	PRPF3	O43395	683 aa	Known RBP	10.81	□□□□□ -0.68
TPM3-218	ENST00000505010	ASNS	P08243	561 aa		10.81	□□□□□ -0.68
TPM3-218	ENST00000505010	FUT2	Q10981	343 aa		10.81	□□□□□ -0.68
TPM3-218	ENST00000505010	KIF22	Q14807	665 aa		10.81	□□□□□ -0.68
TPM3-218	ENST00000505010	TAF1C	Q15572	869 aa	Predicted RBP	10.81	□□□□□ -0.68
TPM3-218	ENST00000505010	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	10.81	□□□□□ -0.68
TPM3-218	ENST00000505010	SLFN13	Q68D06	897 aa		10.81	□□□□□ -0.68
TPM3-218	ENST00000505010	MCTP1	Q6DN14	999 aa		10.81	□□□□□ -0.68
TPM3-218	ENST00000505010	FOXD4L3	Q6VB84	417 aa	Predicted RBP	10.81	□□□□□ -0.68
TPM3-218	ENST00000505010	DCAF4	Q8WV16	495 aa		10.81	□□□□□ -0.68
TPM3-218	ENST00000505010	OPTN	Q96CV9	577 aa		10.81	□□□□□ -0.68
TPM3-218	ENST00000505010	HTATIP2	Q9BUP3	242 aa		10.81	□□□□□ -0.68
TPM3-218	ENST00000505010	GPCPD1	Q9NPB8	672 aa		10.81	□□□□□ -0.68
TPM3-218	ENST00000505010	NR2E3	Q9Y5X4	410 aa		10.81	□□□□□ -0.68
TPM3-218	ENST00000505010	BAG4	O95429	457 aa	Known RBP	10.8	□□□□□ -0.68
TPM3-218	ENST00000505010	GNRH1	P01148	92 aa		10.8	□□□□□ -0.68
TPM3-218	ENST00000505010	SNHG28	P0DPA3	235 aa		10.8	□□□□□ -0.68
TPM3-218	ENST00000505010	INPP5B	P32019	993 aa		10.8	□□□□□ -0.68
TPM3-218	ENST00000505010	ZNF543	Q08ER8	600 aa		10.8	□□□□□ -0.68
TPM3-218	ENST00000505010	NFKBIB	Q15653	356 aa		10.8	□□□□□ -0.68
TPM3-218	ENST00000505010	CCDC84	Q86UT8	332 aa	Predicted RBP	10.8	□□□□□ -0.68
TPM3-218	ENST00000505010	SIAH1	Q8IUQ4	282 aa		10.8	□□□□□ -0.68
TPM3-218	ENST00000505010	GMCL1P1	Q8NEA9	526 aa		10.8	□□□□□ -0.68
TPM3-218	ENST00000505010	ACER1	Q8TDN7	264 aa		10.8	□□□□□ -0.68
TPM3-218	ENST00000505010	MKL1	Q969V6	931 aa		10.8	□□□□□ -0.68
TPM3-218	ENST00000505010	MS4A4A	Q96JQ5	239 aa		10.8	□□□□□ -0.68
TPM3-218	ENST00000505010	WRNIP1	Q96S55	665 aa		10.8	□□□□□ -0.68
TPM3-218	ENST00000505010	FEZ1	Q99689	392 aa		10.8	□□□□□ -0.68
TPM3-218	ENST00000505010	PRO3102	Q9H379	93 aa		10.8	□□□□□ -0.68
TPM3-218	ENST00000505010	CPVL	Q9H3G5	476 aa		10.8	□□□□□ -0.68
TPM3-218	ENST00000505010	SH2D4A	Q9H788	454 aa		10.8	□□□□□ -0.68
TPM3-218	ENST00000505010	ELP3	Q9H9T3	547 aa		10.8	□□□□□ -0.68
TPM3-218	ENST00000505010	GOPC	Q9HD26	462 aa		10.8	□□□□□ -0.68
TPM3-218	ENST00000505010	GJB4	Q9NTQ9	266 aa		10.8	□□□□□ -0.68
TPM3-218	ENST00000505010		V9GY48	417 aa	Predicted RBP	10.8	□□□□□ -0.68
TPM3-218	ENST00000505010	CCL15-CCL14	A0A0B4J2E2	113 aa		10.79	□□□□□ -0.68
TPM3-218	ENST00000505010		A0A1W2PRG0	241 aa		10.79	□□□□□ -0.68
TPM3-218	ENST00000505010	CTNND1	O60716	968 aa	Known RBP	10.79	□□□□□ -0.68
TPM3-218	ENST00000505010	NDUFB10	O96000	172 aa		10.79	□□□□□ -0.68
TPM3-218	ENST00000505010	SLC1A4	P43007	532 aa		10.79	□□□□□ -0.68
TPM3-218	ENST00000505010	GTF2A2	P52657	109 aa		10.79	□□□□□ -0.68
TPM3-218	ENST00000505010	PRMT2	P55345	433 aa		10.79	□□□□□ -0.68
TPM3-218	ENST00000505010	REST	Q13127	1097 aa		10.79	□□□□□ -0.68

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