RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 HLA-DOAP06340 250 aa7.38□□□□□ -1.23
GYPB-204ENST00000504951 MTX1Q13505 466 aa7.38□□□□□ -1.23
GYPB-204ENST00000504951 FAM47AQ5JRC9 791 aa7.38□□□□□ -1.23
GYPB-204ENST00000504951 TYW1BQ6NUM6 668 aa7.38□□□□□ -1.23
GYPB-204ENST00000504951 TMEM199Q8N511 208 aa7.38□□□□□ -1.23
GYPB-204ENST00000504951 SH3RF3Q8TEJ3 882 aaPredicted RBP7.38□□□□□ -1.23
GYPB-204ENST00000504951 ZNF512BQ96KM6 892 aaPredicted RBP7.38□□□□□ -1.23
GYPB-204ENST00000504951 SNX27Q96L92 541 aa7.38□□□□□ -1.23
GYPB-204ENST00000504951 NOL10Q9BSC4 688 aaKnown RBP7.38□□□□□ -1.23
GYPB-204ENST00000504951 ADAMTS5Q9UNA0 930 aa7.38□□□□□ -1.23
GYPB-204ENST00000504951 PCDHGA10Q9Y5H3 936 aa7.38□□□□□ -1.23
GYPB-204ENST00000504951 CHD9Q3L8U1 2897 aa7.38□□□□□ -1.23
GYPB-204ENST00000504951 GTPBP6O43824 516 aaPredicted RBP7.37□□□□□ -1.23
GYPB-204ENST00000504951 GH2P01242 217 aa7.37□□□□□ -1.23
GYPB-204ENST00000504951 UQCRFS1P1P0C7P4 283 aa7.37□□□□□ -1.23
GYPB-204ENST00000504951 ZNF865P0CJ78 1059 aaPredicted RBP7.37□□□□□ -1.23
GYPB-204ENST00000504951 AKR1A1P14550 325 aa7.37□□□□□ -1.23
GYPB-204ENST00000504951 ERCC3P19447 782 aa7.37□□□□□ -1.23
GYPB-204ENST00000504951 COPB2P35606 906 aa7.37□□□□□ -1.23
GYPB-204ENST00000504951 ACLYP53396 1101 aa7.37□□□□□ -1.23
GYPB-204ENST00000504951 MAMDC4Q6UXC1 1216 aa7.37□□□□□ -1.23
GYPB-204ENST00000504951 ZNF365Q70YC5 407 aa7.37□□□□□ -1.23
GYPB-204ENST00000504951 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.37□□□□□ -1.23
GYPB-204ENST00000504951 CRACR2BQ8N4Y2 399 aaPredicted RBP7.37□□□□□ -1.23
GYPB-204ENST00000504951 SLC43A3Q8NBI5 491 aa7.37□□□□□ -1.23
GYPB-204ENST00000504951 TGFBRAP1Q8WUH2 860 aa7.37□□□□□ -1.23
GYPB-204ENST00000504951 SSH1Q8WYL5 1049 aa7.37□□□□□ -1.23
GYPB-204ENST00000504951 FERMT2Q96AC1 680 aa7.37□□□□□ -1.23
GYPB-204ENST00000504951 TINF2Q9BSI4 451 aa7.37□□□□□ -1.23
GYPB-204ENST00000504951 TRIM34Q9BYJ4 488 aa7.37□□□□□ -1.23
GYPB-204ENST00000504951 EPHX3Q9H6B9 360 aa7.37□□□□□ -1.23
GYPB-204ENST00000504951 RPAP3Q9H6T3 665 aaPredicted RBP7.37□□□□□ -1.23
GYPB-204ENST00000504951 SLC28A3Q9HAS3 691 aa7.37□□□□□ -1.23
GYPB-204ENST00000504951 IL23AQ9NPF7 189 aa7.37□□□□□ -1.23
GYPB-204ENST00000504951 C11orf16Q9NQ32 467 aa7.37□□□□□ -1.23
GYPB-204ENST00000504951 STARD7Q9NQZ5 370 aa7.37□□□□□ -1.23
GYPB-204ENST00000504951 SERPINB13Q9UIV8 391 aa7.37□□□□□ -1.23
GYPB-204ENST00000504951 PCDHA11Q9Y5I1 949 aa7.37□□□□□ -1.23
GYPB-204ENST00000504951 XIRP2A4UGR9 3374 aa7.37□□□□□ -1.23
GYPB-204ENST00000504951 SOWAHBA6NEL2 793 aa7.36□□□□□ -1.23
GYPB-204ENST00000504951 PRR33A8MZF0 331 aa7.36□□□□□ -1.23
GYPB-204ENST00000504951 PQBP1O60828 265 aaKnown RBP7.36□□□□□ -1.23
GYPB-204ENST00000504951 DUSP11O75319 330 aaKnown RBP7.36□□□□□ -1.23
GYPB-204ENST00000504951 GDF11O95390 407 aa7.36□□□□□ -1.23
GYPB-204ENST00000504951 CD4P01730 458 aa7.36□□□□□ -1.23
GYPB-204ENST00000504951 UBTFL1P0CB47 393 aaPredicted RBP7.36□□□□□ -1.23
GYPB-204ENST00000504951 FCER1AP12319 257 aa7.36□□□□□ -1.23
GYPB-204ENST00000504951 ZNF792Q3KQV3 632 aa7.36□□□□□ -1.23
GYPB-204ENST00000504951 ALDH1L2Q3SY69 923 aa7.36□□□□□ -1.23
GYPB-204ENST00000504951 CERKLQ49MI3 558 aaPredicted RBP7.36□□□□□ -1.23
GYPB-204ENST00000504951 PRAMEF19Q5SWL8 479 aa7.36□□□□□ -1.23
GYPB-204ENST00000504951 WDR78Q5VTH9 848 aa7.36□□□□□ -1.23
GYPB-204ENST00000504951 NAA16Q6N069 864 aaPredicted RBP7.36□□□□□ -1.23
GYPB-204ENST00000504951 CCDC129Q6ZRS4 1044 aa7.36□□□□□ -1.23
GYPB-204ENST00000504951 TTC6Q86TZ1 520 aa7.36□□□□□ -1.23
GYPB-204ENST00000504951 PCSK9Q8NBP7 692 aaKnown RBP7.36□□□□□ -1.23
GYPB-204ENST00000504951 GLT1D1Q96MS3 346 aa7.36□□□□□ -1.23
GYPB-204ENST00000504951 TANGO6Q9C0B7 1094 aa7.36□□□□□ -1.23
GYPB-204ENST00000504951 SIL1Q9H173 461 aa7.36□□□□□ -1.23
GYPB-204ENST00000504951 CABP5Q9NP86 173 aa7.36□□□□□ -1.23
GYPB-204ENST00000504951 GPR108Q9NPR9 543 aa7.36□□□□□ -1.23
GYPB-204ENST00000504951 LMCD1Q9NZU5 365 aa7.36□□□□□ -1.23
GYPB-204ENST00000504951 RAI14Q9P0K7 980 aa7.36□□□□□ -1.23
GYPB-204ENST00000504951 LRP2BPQ9P2M1 347 aa7.36□□□□□ -1.23
GYPB-204ENST00000504951 PALD1Q9ULE6 856 aa7.36□□□□□ -1.23
GYPB-204ENST00000504951 NDUFB9Q9Y6M9 179 aa7.36□□□□□ -1.23
GYPB-204ENST00000504951 PLXNA1Q9UIW2 1896 aa7.35□□□□□ -1.23
GYPB-204ENST00000504951 ARVCFO00192 962 aa7.35□□□□□ -1.23
GYPB-204ENST00000504951 FGBP02675 491 aa7.35□□□□□ -1.23
GYPB-204ENST00000504951 CSF2RAP15509 400 aa7.35□□□□□ -1.23
GYPB-204ENST00000504951 IGFBP4P22692 258 aa7.35□□□□□ -1.23
GYPB-204ENST00000504951 GUCY1A2P33402 732 aa7.35□□□□□ -1.23
GYPB-204ENST00000504951 MCAMP43121 646 aa7.35□□□□□ -1.23
GYPB-204ENST00000504951 GABPAQ06546 454 aa7.35□□□□□ -1.23
GYPB-204ENST00000504951 KCNA10Q16322 511 aa7.35□□□□□ -1.23
GYPB-204ENST00000504951 ABCB5Q2M3G0 1257 aa7.35□□□□□ -1.23
GYPB-204ENST00000504951 SHROOM1Q2M3G4 852 aaPredicted RBP7.35□□□□□ -1.23
GYPB-204ENST00000504951 PROX2Q3B8N5 592 aa7.35□□□□□ -1.23
GYPB-204ENST00000504951 ANO1Q5XXA6 986 aa7.35□□□□□ -1.23
GYPB-204ENST00000504951 TBC1D9Q6ZT07 1266 aa7.35□□□□□ -1.23
GYPB-204ENST00000504951 ALYREFQ86V81 257 aaKnown RBP7.35□□□□□ -1.23
GYPB-204ENST00000504951 RIOX2Q8IUF8 465 aa7.35□□□□□ -1.23
GYPB-204ENST00000504951 FAM126BQ8IXS8 530 aa7.35□□□□□ -1.23
GYPB-204ENST00000504951 MAGEB6Q8N7X4 407 aa7.35□□□□□ -1.23
GYPB-204ENST00000504951 ACER1Q8TDN7 264 aa7.35□□□□□ -1.23
GYPB-204ENST00000504951 PPM1EQ8WY54 764 aa7.35□□□□□ -1.23
GYPB-204ENST00000504951 CDCA7LQ96GN5 454 aa7.35□□□□□ -1.23
GYPB-204ENST00000504951 FEZ1Q99689 392 aa7.35□□□□□ -1.23
GYPB-204ENST00000504951 EPAS1Q99814 870 aa7.35□□□□□ -1.23
GYPB-204ENST00000504951 UPF3AQ9H1J1 476 aaKnown RBP7.35□□□□□ -1.23
GYPB-204ENST00000504951 AATFQ9NY61 560 aaKnown RBP eCLIP7.35□□□□□ -1.23
GYPB-204ENST00000504951 FAM184BQ9ULE4 1060 aa7.35□□□□□ -1.23
GYPB-204ENST00000504951 MTCH2Q9Y6C9 303 aa7.35□□□□□ -1.23
GYPB-204ENST00000504951 FOCADQ5VW36 1801 aa7.35□□□□□ -1.23
GYPB-204ENST00000504951 CHD7Q9P2D1 2997 aa7.34□□□□□ -1.23
GYPB-204ENST00000504951 TCF20Q9UGU0 1960 aaKnown RBP7.34□□□□□ -1.23
GYPB-204ENST00000504951 A0A0U1RQG5 324 aaPredicted RBP7.34□□□□□ -1.23
GYPB-204ENST00000504951 GRXCR1A8MXD5 290 aa7.34□□□□□ -1.23
GYPB-204ENST00000504951 SMIM22K7EJ46 135 aa7.34□□□□□ -1.23
GYPB-204ENST00000504951 TLR3O15455 904 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms