RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 RASIP1Q5U651 963 aa8.68□□□□□ -1.02
ATP2C1-208ENST00000504948 LONP2Q86WA8 852 aa8.68□□□□□ -1.02
ATP2C1-208ENST00000504948 CCDC63Q8NA47 563 aa8.68□□□□□ -1.02
ATP2C1-208ENST00000504948 EPSTI1Q96J88 318 aa8.68□□□□□ -1.02
ATP2C1-208ENST00000504948 NOC4LQ9BVI4 516 aaKnown RBP8.68□□□□□ -1.02
ATP2C1-208ENST00000504948 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.68□□□□□ -1.021e-6■■■■□ 20.6
ATP2C1-208ENST00000504948 NOVA2Q9UNW9 492 aaKnown RBP8.68□□□□□ -1.02
ATP2C1-208ENST00000504948 CCDC194A0A1B0GVG4 234 aa8.68□□□□□ -1.02
ATP2C1-208ENST00000504948 PLEKHG3A1L390 1219 aa8.68□□□□□ -1.02
ATP2C1-208ENST00000504948 EXOC5O00471 708 aa8.68□□□□□ -1.02
ATP2C1-208ENST00000504948 CTNND1O60716 968 aaKnown RBP8.68□□□□□ -1.02
ATP2C1-208ENST00000504948 RBBP5Q15291 538 aaKnown RBP8.68□□□□□ -1.02
ATP2C1-208ENST00000504948 CSGALNACT2Q8N6G5 542 aa8.68□□□□□ -1.02
ATP2C1-208ENST00000504948 RRP36Q96EU6 259 aaKnown RBP8.68□□□□□ -1.02
ATP2C1-208ENST00000504948 MMS19Q96T76 1030 aa8.68□□□□□ -1.02
ATP2C1-208ENST00000504948 MED4Q9NPJ6 270 aa8.68□□□□□ -1.02
ATP2C1-208ENST00000504948 WWC3Q9ULE0 1092 aa8.68□□□□□ -1.02
ATP2C1-208ENST00000504948 TTF2Q9UNY4 1162 aaKnown RBP8.68□□□□□ -1.02
ATP2C1-208ENST00000504948 PHLPP2Q6ZVD8 1323 aa8.68□□□□□ -1.02
ATP2C1-208ENST00000504948 CHL1O00533 1208 aa8.68□□□□□ -1.02
ATP2C1-208ENST00000504948 HEXIM1O94992 359 aaKnown RBP8.68□□□□□ -1.02
ATP2C1-208ENST00000504948 RASSF7Q02833 373 aa8.68□□□□□ -1.02
ATP2C1-208ENST00000504948 PLS1Q14651 629 aa8.68□□□□□ -1.02
ATP2C1-208ENST00000504948 KIF22Q14807 665 aa8.68□□□□□ -1.02
ATP2C1-208ENST00000504948 LRRC14Q15048 493 aa8.68□□□□□ -1.02
ATP2C1-208ENST00000504948 EZH2Q15910 746 aaKnown RBP8.68□□□□□ -1.02
ATP2C1-208ENST00000504948 RTN1Q16799 776 aa8.68□□□□□ -1.02
ATP2C1-208ENST00000504948 PIK3AP1Q6ZUJ8 805 aa8.68□□□□□ -1.02
ATP2C1-208ENST00000504948 VSTM4Q8IW00 320 aa8.68□□□□□ -1.02
ATP2C1-208ENST00000504948 AP1M1Q9BXS5 423 aa8.68□□□□□ -1.02
ATP2C1-208ENST00000504948 SRCAPQ6ZRS2 3230 aa8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 BCORQ6W2J9 1755 aa8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 B4DLN1 442 aa8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 KCNK3O14649 394 aa8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 STX10O60499 249 aa8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 ADAMTS2O95450 1211 aa8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 ATP1A1P05023 1023 aaKnown RBP8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 ABCB4P21439 1286 aa8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 PDIA3P30101 505 aaKnown RBP8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 KRT83P78385 493 aa8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 LACTBP83111 547 aaPredicted RBP8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 CCDC38Q502W7 563 aa8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 ZNF449Q6P9G9 518 aa8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 LDHAL6AQ6ZMR3 332 aa8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 USP49Q70CQ1 688 aa8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 LINC00301Q8NCQ3 95 aa8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 LUC7LQ9NQ29 371 aaKnown RBP8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 TBK1Q9UHD2 729 aa8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 HYOU1Q9Y4L1 999 aa8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 V9GY48 417 aaPredicted RBP8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 C4AP0C0L4 1744 aa8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 C4BP0C0L5 1744 aa8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 IL13P35225 146 aa8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 APBB1IPQ7Z5R6 666 aaPredicted RBP8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 NELFCDQ8IXH7 590 aa8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 EHBP1Q8NDI1 1231 aa8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 NELFBQ8WX92 580 aa8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 TTC14Q96N46 770 aa8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 ELAC2Q9BQ52 826 aaKnown RBP8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 LRWD1Q9UFC0 647 aa8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 ATP8A1Q9Y2Q0 1164 aa8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 TRIM49BA6NDI0 452 aa8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 CHUKO15111 745 aa8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 CAND2O75155 1236 aa8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 CORO7P57737 925 aa8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 RAD9BQ6WBX8 426 aa8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 MLXIPQ9HAP2 919 aa8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 KLC4Q9NSK0 619 aa8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 GEMIN8Q9NWZ8 242 aaKnown RBP8.67□□□□□ -1.02
ATP2C1-208ENST00000504948 PHF20L1A8MW92 1017 aa8.66□□□□□ -1.02
ATP2C1-208ENST00000504948 CETN3O15182 167 aa8.66□□□□□ -1.02
ATP2C1-208ENST00000504948 TAF5LO75529 589 aa8.66□□□□□ -1.02
ATP2C1-208ENST00000504948 IRAK1P51617 712 aa8.66□□□□□ -1.02
ATP2C1-208ENST00000504948 WTAPQ15007 396 aa8.66□□□□□ -1.02
ATP2C1-208ENST00000504948 UAP1Q16222 522 aaPredicted RBP8.66□□□□□ -1.02
ATP2C1-208ENST00000504948 GDAP1Q8TB36 358 aa8.66□□□□□ -1.02
ATP2C1-208ENST00000504948 FUCA2Q9BTY2 467 aa8.66□□□□□ -1.02
ATP2C1-208ENST00000504948 GOLPH3Q9H4A6 298 aa8.66□□□□□ -1.02
ATP2C1-208ENST00000504948 L3MBTL1Q9Y468 752 aa8.66□□□□□ -1.02
ATP2C1-208ENST00000504948 BAZ2BQ9UIF8 2168 aaKnown RBP8.66□□□□□ -1.02
ATP2C1-208ENST00000504948 PSMA7O14818 248 aa8.66□□□□□ -1.02
ATP2C1-208ENST00000504948 DIAPH2O60879 1101 aa8.66□□□□□ -1.02
ATP2C1-208ENST00000504948 NR1D1P20393 614 aa8.66□□□□□ -1.02
ATP2C1-208ENST00000504948 PDE4BQ07343 736 aa8.66□□□□□ -1.02
ATP2C1-208ENST00000504948 NFRKBQ6P4R8 1299 aa8.66□□□□□ -1.02
ATP2C1-208ENST00000504948 PI4K2BQ8TCG2 481 aa8.66□□□□□ -1.02
ATP2C1-208ENST00000504948 MS4A14Q96JA4 679 aa8.66□□□□□ -1.02
ATP2C1-208ENST00000504948 CEP131Q9UPN4 1083 aa8.66□□□□□ -1.02
ATP2C1-208ENST00000504948 BAG2O95816 211 aa8.66□□□□□ -1.02
ATP2C1-208ENST00000504948 ABL1P00519 1130 aa8.66□□□□□ -1.02
ATP2C1-208ENST00000504948 DCAF17Q5H9S7 520 aaPredicted RBP8.66□□□□□ -1.02
ATP2C1-208ENST00000504948 GKAP1Q5VSY0 366 aaPredicted RBP8.66□□□□□ -1.02
ATP2C1-208ENST00000504948 CCDC50Q8IVM0 306 aa8.66□□□□□ -1.02
ATP2C1-208ENST00000504948 NACAP1Q9BZK3 213 aa8.66□□□□□ -1.02
ATP2C1-208ENST00000504948 RCOR1Q9UKL0 485 aa8.66□□□□□ -1.02
ATP2C1-208ENST00000504948 DUSP10Q9Y6W6 482 aa8.66□□□□□ -1.02
ATP2C1-208ENST00000504948 FMR1Q06787 632 aaKnown RBP eCLIP8.66□□□□□ -1.022e-20■■■■■ 71.1
ATP2C1-208ENST00000504948 PSMD6Q15008 389 aa8.66□□□□□ -1.02
ATP2C1-208ENST00000504948 TAF11Q15544 211 aa8.66□□□□□ -1.02
ATP2C1-208ENST00000504948 MFSD6Q6ZSS7 791 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms