RNA–Protein interactions for RNA: ENST00000504927.5

DDR1-255, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-255ENST00000504927 ERICH2A1L162 156 aa24.25■■□□□ 1.47
DDR1-255ENST00000504927 ERCC3P19447 782 aa24.25■■□□□ 1.47
DDR1-255ENST00000504927 PTPREP23469 700 aa24.25■■□□□ 1.47
DDR1-255ENST00000504927 OAZ1P54368 228 aa24.25■■□□□ 1.47
DDR1-255ENST00000504927 CCDC96Q2M329 555 aa24.25■■□□□ 1.47
DDR1-255ENST00000504927 CYB5R4Q7L1T6 521 aa24.25■■□□□ 1.47
DDR1-255ENST00000504927 PNMA1Q8ND90 353 aa24.25■■□□□ 1.47
DDR1-255ENST00000504927 ZNF333Q96JL9 665 aa24.25■■□□□ 1.47
DDR1-255ENST00000504927 MTMR7Q9Y216 660 aa24.25■■□□□ 1.47
DDR1-255ENST00000504927 RLFQ13129 1914 aa24.25■■□□□ 1.47
DDR1-255ENST00000504927 REC8O95072 547 aa24.24■■□□□ 1.47
DDR1-255ENST00000504927 SNHG28P0DPA3 235 aa24.24■■□□□ 1.47
DDR1-255ENST00000504927 PDHBP11177 359 aa24.24■■□□□ 1.47
DDR1-255ENST00000504927 RGS2P41220 211 aa24.24■■□□□ 1.47
DDR1-255ENST00000504927 IFIT1BQ5T764 474 aaKnown RBP24.24■■□□□ 1.47
DDR1-255ENST00000504927 BTNL9Q6UXG8 535 aa24.24■■□□□ 1.47
DDR1-255ENST00000504927 STOX1Q6ZVD7 989 aa24.24■■□□□ 1.47
DDR1-255ENST00000504927 NCAPG2Q86XI2 1143 aa24.24■■□□□ 1.47
DDR1-255ENST00000504927 TRMT44Q8IYL2 757 aaKnown RBP24.24■■□□□ 1.47
DDR1-255ENST00000504927 USP6NLQ92738 828 aa24.24■■□□□ 1.47
DDR1-255ENST00000504927 MTA3Q9BTC8 594 aa24.24■■□□□ 1.47
DDR1-255ENST00000504927 TEX13BQ9BXU2 312 aa24.24■■□□□ 1.47
DDR1-255ENST00000504927 ZNF214Q9UL59 606 aaPredicted RBP24.24■■□□□ 1.47
DDR1-255ENST00000504927 TAF6LQ9Y6J9 622 aa24.24■■□□□ 1.47
DDR1-255ENST00000504927 UBXN2AP68543 259 aa24.23■■□□□ 1.47
DDR1-255ENST00000504927 SEC23AQ15436 765 aa24.23■■□□□ 1.47
DDR1-255ENST00000504927 GPATCH4Q5T3I0 446 aaKnown RBP24.23■■□□□ 1.47
DDR1-255ENST00000504927 ABRAQ8N0Z2 381 aa24.23■■□□□ 1.47
DDR1-255ENST00000504927 SH3TC2Q8TF17 1288 aa24.23■■□□□ 1.47
DDR1-255ENST00000504927 CHMP4CQ96CF2 233 aa24.23■■□□□ 1.47
DDR1-255ENST00000504927 BIN2Q9UBW5 565 aaPredicted RBP24.23■■□□□ 1.47
DDR1-255ENST00000504927 TNRC18O15417 2968 aaPredicted RBP24.22■■□□□ 1.47
DDR1-255ENST00000504927 DOCK3Q8IZD9 2030 aa24.22■■□□□ 1.47
DDR1-255ENST00000504927 IFIT3O14879 490 aaKnown RBP24.22■■□□□ 1.47
DDR1-255ENST00000504927 ZKSCAN1P17029 563 aaPredicted RBP24.22■■□□□ 1.47
DDR1-255ENST00000504927 CYP2B6P20813 491 aa24.22■■□□□ 1.47
DDR1-255ENST00000504927 ZNF543Q08ER8 600 aa24.22■■□□□ 1.47
DDR1-255ENST00000504927 MAP2K5Q13163 448 aa24.22■■□□□ 1.47
DDR1-255ENST00000504927 GRB14Q14449 540 aa24.22■■□□□ 1.47
DDR1-255ENST00000504927 TSGA10IPQ3SY00 556 aa24.22■■□□□ 1.47
DDR1-255ENST00000504927 EPB41L2O43491 1005 aaKnown RBP24.21■■□□□ 1.47
DDR1-255ENST00000504927 MCM5P33992 734 aa24.21■■□□□ 1.47
DDR1-255ENST00000504927 MB21D2Q8IYB1 491 aaPredicted RBP24.21■■□□□ 1.47
DDR1-255ENST00000504927 SLC5A4Q9NY91 659 aa24.21■■□□□ 1.47
DDR1-255ENST00000504927 PRR12Q9ULL5 1215 aa24.21■■□□□ 1.47
DDR1-255ENST00000504927 MKI67P46013 3256 aaKnown RBP24.2■■□□□ 1.47
DDR1-255ENST00000504927 HOXC6P09630 235 aa24.2■■□□□ 1.46
DDR1-255ENST00000504927 FCER1AP12319 257 aa24.2■■□□□ 1.46
DDR1-255ENST00000504927 KRT32Q14532 448 aa24.2■■□□□ 1.46
DDR1-255ENST00000504927 SNRNP48Q6IEG0 339 aaKnown RBP24.2■■□□□ 1.46
DDR1-255ENST00000504927 CPXCR1Q8N123 301 aa24.2■■□□□ 1.46
DDR1-255ENST00000504927 TMEM106CQ9BVX2 250 aa24.2■■□□□ 1.46
DDR1-255ENST00000504927 GPCPD1Q9NPB8 672 aa24.2■■□□□ 1.46
DDR1-255ENST00000504927 A0A0G2JMZ2 1700 aa24.19■■□□□ 1.46
DDR1-255ENST00000504927 ELNP15502 786 aa24.19■■□□□ 1.46
DDR1-255ENST00000504927 RGS19P49795 217 aa24.19■■□□□ 1.46
DDR1-255ENST00000504927 WTAPQ15007 396 aa24.19■■□□□ 1.46
DDR1-255ENST00000504927 SYDE2Q5VT97 1194 aa24.19■■□□□ 1.46
DDR1-255ENST00000504927 TTBK2Q6IQ55 1244 aa24.19■■□□□ 1.46
DDR1-255ENST00000504927 DPP9Q86TI2 863 aa24.19■■□□□ 1.46
DDR1-255ENST00000504927 TMTC2Q8N394 836 aa24.19■■□□□ 1.46
DDR1-255ENST00000504927 IGDCC4Q8TDY8 1250 aa24.19■■□□□ 1.46
DDR1-255ENST00000504927 APBA2Q99767 749 aa24.19■■□□□ 1.46
DDR1-255ENST00000504927 RAVER2Q9HCJ3 691 aaKnown RBP24.19■■□□□ 1.46
DDR1-255ENST00000504927 FBXO40Q9UH90 709 aa24.19■■□□□ 1.46
DDR1-255ENST00000504927 PNMA2Q9UL42 364 aa24.19■■□□□ 1.46
DDR1-255ENST00000504927 KIAA0100Q14667 2235 aaKnown RBP24.19■■□□□ 1.46
DDR1-255ENST00000504927 FRMPD2Q68DX3 1309 aaPredicted RBP24.18■■□□□ 1.46
DDR1-255ENST00000504927 HMGCRP04035 888 aa24.18■■□□□ 1.46
DDR1-255ENST00000504927 ADORA2AP29274 412 aa24.18■■□□□ 1.46
DDR1-255ENST00000504927 ASPRV1Q53RT3 343 aa24.18■■□□□ 1.46
DDR1-255ENST00000504927 TMEM67Q5HYA8 995 aa24.18■■□□□ 1.46
DDR1-255ENST00000504927 RASGRP2Q7LDG7 609 aa24.18■■□□□ 1.46
DDR1-255ENST00000504927 CHST13Q8NET6 341 aa24.18■■□□□ 1.46
DDR1-255ENST00000504927 TMEM87BQ96K49 555 aa24.18■■□□□ 1.46
DDR1-255ENST00000504927 PARP14Q460N5 1801 aa24.18■■□□□ 1.46
DDR1-255ENST00000504927 PLXNB2O15031 1838 aa24.17■■□□□ 1.46
DDR1-255ENST00000504927 MYCP01106 439 aaPredicted RBP24.17■■□□□ 1.46
DDR1-255ENST00000504927 PARP1P09874 1014 aaKnown RBP24.17■■□□□ 1.46
DDR1-255ENST00000504927 SLC16A2P36021 539 aa24.17■■□□□ 1.46
DDR1-255ENST00000504927 ANTXR2P58335 489 aa24.17■■□□□ 1.46
DDR1-255ENST00000504927 KCTD2Q14681 263 aa24.17■■□□□ 1.46
DDR1-255ENST00000504927 TKFCQ3LXA3 575 aa24.17■■□□□ 1.46
DDR1-255ENST00000504927 CHST3Q7LGC8 479 aa24.17■■□□□ 1.46
DDR1-255ENST00000504927 KCNB2Q92953 911 aa24.17■■□□□ 1.46
DDR1-255ENST00000504927 NEK1Q96PY6 1258 aa24.17■■□□□ 1.46
DDR1-255ENST00000504927 MMP19Q99542 508 aa24.17■■□□□ 1.46
DDR1-255ENST00000504927 RBBP6Q7Z6E9 1792 aaKnown RBP24.16■■□□□ 1.46
DDR1-255ENST00000504927 POTEFA5A3E0 1075 aa24.16■■□□□ 1.46
DDR1-255ENST00000504927 PRC1O43663 620 aa24.16■■□□□ 1.46
DDR1-255ENST00000504927 EIF5BO60841 1220 aaKnown RBP24.16■■□□□ 1.46
DDR1-255ENST00000504927 INHAP05111 366 aa24.16■■□□□ 1.46
DDR1-255ENST00000504927 RANBP17Q9H2T7 1088 aaKnown RBP24.16■■□□□ 1.46
DDR1-255ENST00000504927 RIPK3Q9Y572 518 aa24.16■■□□□ 1.46
DDR1-255ENST00000504927 HMGB1P09429 215 aaKnown RBP24.15■■□□□ 1.46
DDR1-255ENST00000504927 HSPA4P34932 840 aa24.15■■□□□ 1.46
DDR1-255ENST00000504927 SLC4A3P48751 1232 aa24.15■■□□□ 1.46
DDR1-255ENST00000504927 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.15■■□□□ 1.46
DDR1-255ENST00000504927 TRIB2Q92519 343 aa24.15■■□□□ 1.46
DDR1-255ENST00000504927 ZNF536O15090 1300 aa24.14■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms