RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 IFIT1BQ5T764 474 aaKnown RBP5.79□□□□□ -1.48
LMNB1-208ENST00000504788 SLFN13Q68D06 897 aa5.79□□□□□ -1.48
LMNB1-208ENST00000504788 ZNF274Q96GC6 653 aaPredicted RBP5.79□□□□□ -1.48
LMNB1-208ENST00000504788 P2RX7Q99572 595 aaKnown RBP5.79□□□□□ -1.48
LMNB1-208ENST00000504788 LARP6Q9BRS8 491 aaKnown RBP5.79□□□□□ -1.48
LMNB1-208ENST00000504788 UBAC1Q9BSL1 405 aa5.79□□□□□ -1.48
LMNB1-208ENST00000504788 ASCC2Q9H1I8 757 aaPredicted RBP5.79□□□□□ -1.48
LMNB1-208ENST00000504788 ARHGEF10LQ9HCE6 1279 aa5.79□□□□□ -1.48
LMNB1-208ENST00000504788 RBPJLQ9UBG7 517 aa5.79□□□□□ -1.48
LMNB1-208ENST00000504788 MYPNQ86TC9 1320 aa5.79□□□□□ -1.48
LMNB1-208ENST00000504788 OPLAHO14841 1288 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 ATP2A1O14983 1001 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 PPP1R11O60927 126 aaPredicted RBP5.78□□□□□ -1.48
LMNB1-208ENST00000504788 DDAH1O94760 285 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 PLEKHA8P1O95397 391 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 GOLGA8HP0CJ92 632 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 CYP2C8P10632 490 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 FDPSP14324 419 aaKnown RBP5.78□□□□□ -1.48
LMNB1-208ENST00000504788 ADD1P35611 737 aaKnown RBP5.78□□□□□ -1.48
LMNB1-208ENST00000504788 SCRN1Q12765 414 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 Q3C1V9 767 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 C17orf99Q6UX52 265 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 KCTD1Q719H9 257 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 FASTKD5Q7L8L6 764 aaKnown RBP5.78□□□□□ -1.48
LMNB1-208ENST00000504788 TMTC2Q8N394 836 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 SRBD1Q8N5C6 995 aaKnown RBP5.78□□□□□ -1.48
LMNB1-208ENST00000504788 FANCBQ8NB91 859 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 DCAF4Q8WV16 495 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 RPAP3Q9H6T3 665 aaPredicted RBP5.78□□□□□ -1.48
LMNB1-208ENST00000504788 JMJD4Q9H9V9 463 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 SLC38A10Q9HBR0 1119 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 PDRG1Q9NUG6 133 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 WBP1LQ9NX94 342 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 BTBD7Q9P203 1132 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 PPP1R9AQ9ULJ8 1098 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 PLXNA1Q9UIW2 1896 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 CNTNAP5Q8WYK1 1306 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 KLF18A0A0U1RQI7 1052 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 PDHXO00330 501 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 VWA5AO00534 786 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 PFKFB2O60825 505 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 DTNBO60941 627 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 IGHA2P01877 340 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 BMP3P12645 472 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 SMARCA1P28370 1054 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 HERVK_113P62684 666 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 CRHR2Q13324 411 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 TMEM132BQ14DG7 1078 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 PKN1Q16512 942 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 NOM1Q5C9Z4 860 aaKnown RBP5.78□□□□□ -1.48
LMNB1-208ENST00000504788 PPP4R3BQ5MIZ7 849 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 TMTC3Q6ZXV5 915 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 RAB11FIP4Q86YS3 637 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 IL27Q8NEV9 243 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 ATG4CQ96DT6 458 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 SPZ1Q9BXG8 430 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 RANBP17Q9H2T7 1088 aaKnown RBP5.78□□□□□ -1.48
LMNB1-208ENST00000504788 SH2D4AQ9H788 454 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 GOPCQ9HD26 462 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 MORF4L1Q9UBU8 362 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 PRR12Q9ULL5 1215 aa5.78□□□□□ -1.48
LMNB1-208ENST00000504788 USP17L15C9J2P7 530 aa5.77□□□□□ -1.49
LMNB1-208ENST00000504788 USP17L13C9JLJ4 530 aa5.77□□□□□ -1.49
LMNB1-208ENST00000504788 USP17L11C9JVI0 530 aa5.77□□□□□ -1.49
LMNB1-208ENST00000504788 USP17L18D6R9N7 530 aa5.77□□□□□ -1.49
LMNB1-208ENST00000504788 USP17L22D6RA61 530 aa5.77□□□□□ -1.49
LMNB1-208ENST00000504788 USP17L17D6RBQ6 530 aa5.77□□□□□ -1.49
LMNB1-208ENST00000504788 USP17L19D6RCP7 530 aa5.77□□□□□ -1.49
LMNB1-208ENST00000504788 USP17L20D6RJB6 530 aa5.77□□□□□ -1.49
LMNB1-208ENST00000504788 ADAMTS3O15072 1205 aa5.77□□□□□ -1.49
LMNB1-208ENST00000504788 CA12O43570 354 aa5.77□□□□□ -1.49
LMNB1-208ENST00000504788 TLR2O60603 784 aa5.77□□□□□ -1.49
LMNB1-208ENST00000504788 SLC16A2P36021 539 aa5.77□□□□□ -1.49
LMNB1-208ENST00000504788 SLC1A4P43007 532 aa5.77□□□□□ -1.49
LMNB1-208ENST00000504788 ATN1P54259 1190 aaPredicted RBP5.77□□□□□ -1.49
LMNB1-208ENST00000504788 ATP2B2Q01814 1243 aa5.77□□□□□ -1.49
LMNB1-208ENST00000504788 GHRHRQ02643 423 aa5.77□□□□□ -1.49
LMNB1-208ENST00000504788 USP17L24Q0WX57 530 aa5.77□□□□□ -1.49
LMNB1-208ENST00000504788 CUL4AQ13619 759 aa5.77□□□□□ -1.49
LMNB1-208ENST00000504788 COG2Q14746 738 aa5.77□□□□□ -1.49
LMNB1-208ENST00000504788 SART3Q15020 963 aaKnown RBP5.77□□□□□ -1.49
LMNB1-208ENST00000504788 NPY5RQ15761 445 aa5.77□□□□□ -1.49
LMNB1-208ENST00000504788 ASPRV1Q53RT3 343 aa5.77□□□□□ -1.49
LMNB1-208ENST00000504788 GPATCH4Q5T3I0 446 aaKnown RBP5.77□□□□□ -1.49
LMNB1-208ENST00000504788 TYW1BQ6NUM6 668 aa5.77□□□□□ -1.49
LMNB1-208ENST00000504788 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.77□□□□□ -1.49
LMNB1-208ENST00000504788 MICU3Q86XE3 530 aa5.77□□□□□ -1.49
LMNB1-208ENST00000504788 CMTR1Q8N1G2 835 aaKnown RBP5.77□□□□□ -1.49
LMNB1-208ENST00000504788 PRPF38AQ8NAV1 312 aaKnown RBP5.77□□□□□ -1.49
LMNB1-208ENST00000504788 SMARCC2Q8TAQ2 1214 aa5.77□□□□□ -1.49
LMNB1-208ENST00000504788 GTF3C6Q969F1 213 aa5.77□□□□□ -1.49
LMNB1-208ENST00000504788 SNX21Q969T3 373 aa5.77□□□□□ -1.49
LMNB1-208ENST00000504788 KAT14Q9H8E8 782 aa5.77□□□□□ -1.49
LMNB1-208ENST00000504788 NCOA5Q9HCD5 579 aaKnown RBP5.77□□□□□ -1.49
LMNB1-208ENST00000504788 RNF186Q9NXI6 227 aa5.77□□□□□ -1.49
LMNB1-208ENST00000504788 RIPK3Q9Y572 518 aa5.77□□□□□ -1.49
LMNB1-208ENST00000504788 CASP8AP2Q9UKL3 1982 aa5.77□□□□□ -1.49
LMNB1-208ENST00000504788 FRMPD2Q68DX3 1309 aaPredicted RBP5.77□□□□□ -1.49
LMNB1-208ENST00000504788 MCM3APO60318 1980 aa5.76□□□□□ -1.49
LMNB1-208ENST00000504788 TMEM232C9JQI7 657 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms