RNA–Protein interactions for RNA: ENST00000504606.1

TRIO-206, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-206ENST00000504606 PTPRFP10586 1907 aa13.13□□□□□ -0.31
TRIO-206ENST00000504606 VPS37CA5D8V6 355 aaPredicted RBP13.13□□□□□ -0.31
TRIO-206ENST00000504606 H3BQV1 296 aa13.13□□□□□ -0.31
TRIO-206ENST00000504606 CXCL11O14625 94 aa13.13□□□□□ -0.31
TRIO-206ENST00000504606 STX6O43752 255 aa13.13□□□□□ -0.31
TRIO-206ENST00000504606 SCG2P13521 617 aa13.13□□□□□ -0.31
TRIO-206ENST00000504606 GJA5P36382 358 aa13.13□□□□□ -0.31
TRIO-206ENST00000504606 HUNKP57058 714 aa13.13□□□□□ -0.31
TRIO-206ENST00000504606 NUCB2P80303 420 aa13.13□□□□□ -0.31
TRIO-206ENST00000504606 PKP1Q13835 747 aa13.13□□□□□ -0.31
TRIO-206ENST00000504606 PFKFB3Q16875 520 aaPredicted RBP13.13□□□□□ -0.31
TRIO-206ENST00000504606 IFFO2Q5TF58 517 aa13.13□□□□□ -0.31
TRIO-206ENST00000504606 SAMD1Q6SPF0 538 aaPredicted RBP13.13□□□□□ -0.31
TRIO-206ENST00000504606 BTNL9Q6UXG8 535 aa13.13□□□□□ -0.31
TRIO-206ENST00000504606 FAM160B2Q86V87 743 aa13.13□□□□□ -0.31
TRIO-206ENST00000504606 CHURC1Q8WUH1 139 aa13.13□□□□□ -0.31
TRIO-206ENST00000504606 WNK4Q96J92 1243 aa13.13□□□□□ -0.31
TRIO-206ENST00000504606 TANGO6Q9C0B7 1094 aa13.13□□□□□ -0.31
TRIO-206ENST00000504606 JMJD4Q9H9V9 463 aa13.13□□□□□ -0.31
TRIO-206ENST00000504606 FEM1BQ9UK73 627 aa13.13□□□□□ -0.31
TRIO-206ENST00000504606 PRR12Q9ULL5 1215 aa13.13□□□□□ -0.31
TRIO-206ENST00000504606 KCNH4Q9UQ05 1017 aa13.13□□□□□ -0.31
TRIO-206ENST00000504606 BAZ2BQ9UIF8 2168 aaKnown RBP13.13□□□□□ -0.31
TRIO-206ENST00000504606 A0A0G2JLL6 359 aaPredicted RBP13.12□□□□□ -0.31
TRIO-206ENST00000504606 PLA2G6O60733 806 aa13.12□□□□□ -0.31
TRIO-206ENST00000504606 PDIA4P13667 645 aaKnown RBP13.12□□□□□ -0.31
TRIO-206ENST00000504606 GUCY1B3Q02153 619 aa13.12□□□□□ -0.31
TRIO-206ENST00000504606 TRIM29Q14134 588 aa13.12□□□□□ -0.31
TRIO-206ENST00000504606 OTUD7BQ6GQQ9 843 aa13.12□□□□□ -0.31
TRIO-206ENST00000504606 GADL1Q6ZQY3 521 aa13.12□□□□□ -0.31
TRIO-206ENST00000504606 PRRT2Q7Z6L0 340 aaPredicted RBP13.12□□□□□ -0.31
TRIO-206ENST00000504606 KIFC2Q96AC6 838 aa13.12□□□□□ -0.31
TRIO-206ENST00000504606 GJB4Q9NTQ9 266 aa13.12□□□□□ -0.31
TRIO-206ENST00000504606 FBXO28Q9NVF7 368 aa13.12□□□□□ -0.31
TRIO-206ENST00000504606 LOC285556D6RIA3 1793 aa13.12□□□□□ -0.31
TRIO-206ENST00000504606 WDR33Q9C0J8 1336 aaKnown RBP13.12□□□□□ -0.31
TRIO-206ENST00000504606 ZBTB5O15062 677 aa13.11□□□□□ -0.31
TRIO-206ENST00000504606 FLOT1O75955 427 aa13.11□□□□□ -0.31
TRIO-206ENST00000504606 XBP1P17861 261 aa13.11□□□□□ -0.31
TRIO-206ENST00000504606 SNAP25P60880 206 aa13.11□□□□□ -0.31
TRIO-206ENST00000504606 FSTL1Q12841 308 aa13.11□□□□□ -0.31
TRIO-206ENST00000504606 MKRN3Q13064 507 aaKnown RBP13.11□□□□□ -0.31
TRIO-206ENST00000504606 SNAPC2Q13487 334 aa13.11□□□□□ -0.31
TRIO-206ENST00000504606 CDC37Q16543 378 aaPredicted RBP13.11□□□□□ -0.31
TRIO-206ENST00000504606 FOXD4L5Q5VV16 416 aaPredicted RBP13.11□□□□□ -0.31
TRIO-206ENST00000504606 KRT40Q6A162 431 aa13.11□□□□□ -0.31
TRIO-206ENST00000504606 HEATR3Q7Z4Q2 680 aa13.11□□□□□ -0.31
TRIO-206ENST00000504606 FOXD4L4Q8WXT5 416 aaPredicted RBP13.11□□□□□ -0.31
TRIO-206ENST00000504606 GPKOWQ92917 476 aaPredicted RBP eCLIP13.11□□□□□ -0.31
TRIO-206ENST00000504606 MTMR8Q96EF0 704 aa13.11□□□□□ -0.31
TRIO-206ENST00000504606 SLF1Q9BQI6 1058 aa13.11□□□□□ -0.31
TRIO-206ENST00000504606 VPS54Q9P1Q0 977 aa13.11□□□□□ -0.31
TRIO-206ENST00000504606 MTMR6Q9Y217 621 aa13.11□□□□□ -0.31
TRIO-206ENST00000504606 PNMA6FA0A0J9YX94 578 aa13.1□□□□□ -0.31
TRIO-206ENST00000504606 USP17L15C9J2P7 530 aa13.1□□□□□ -0.31
TRIO-206ENST00000504606 USP17L13C9JLJ4 530 aa13.1□□□□□ -0.31
TRIO-206ENST00000504606 USP17L11C9JVI0 530 aa13.1□□□□□ -0.31
TRIO-206ENST00000504606 USP17L18D6R9N7 530 aa13.1□□□□□ -0.31
TRIO-206ENST00000504606 USP17L22D6RA61 530 aa13.1□□□□□ -0.31
TRIO-206ENST00000504606 USP17L17D6RBQ6 530 aa13.1□□□□□ -0.31
TRIO-206ENST00000504606 USP17L19D6RCP7 530 aa13.1□□□□□ -0.31
TRIO-206ENST00000504606 USP17L20D6RJB6 530 aa13.1□□□□□ -0.31
TRIO-206ENST00000504606 BRD1O95696 1058 aa13.1□□□□□ -0.31
TRIO-206ENST00000504606 USP17L24Q0WX57 530 aa13.1□□□□□ -0.31
TRIO-206ENST00000504606 QRICH1Q2TAL8 776 aa13.1□□□□□ -0.31
TRIO-206ENST00000504606 SPRYD7Q5W111 196 aa13.1□□□□□ -0.31
TRIO-206ENST00000504606 WWC2Q6AWC2 1192 aa13.1□□□□□ -0.31
TRIO-206ENST00000504606 FASTKD5Q7L8L6 764 aaKnown RBP13.1□□□□□ -0.31
TRIO-206ENST00000504606 SAPCD2Q86UD0 394 aa13.1□□□□□ -0.31
TRIO-206ENST00000504606 PROCA1Q8NCQ7 364 aaPredicted RBP13.1□□□□□ -0.31
TRIO-206ENST00000504606 FBXO18Q8NFZ0 1043 aa13.1□□□□□ -0.31
TRIO-206ENST00000504606 TLL2Q9Y6L7 1015 aa13.1□□□□□ -0.31
TRIO-206ENST00000504606 TMEM88BA6NKF7 163 aa13.09□□□□□ -0.31
TRIO-206ENST00000504606 hCG_1984214I3L0E3 225 aa13.09□□□□□ -0.31
TRIO-206ENST00000504606 ZSCAN22P10073 491 aaPredicted RBP13.09□□□□□ -0.31
TRIO-206ENST00000504606 ZBTB48P10074 688 aaPredicted RBP13.09□□□□□ -0.31
TRIO-206ENST00000504606 ZNF157P51786 506 aaPredicted RBP13.09□□□□□ -0.31
TRIO-206ENST00000504606 NAPAP54920 295 aa13.09□□□□□ -0.31
TRIO-206ENST00000504606 TREML2Q5T2D2 321 aa13.09□□□□□ -0.31
TRIO-206ENST00000504606 RGMBQ6NW40 437 aa13.09□□□□□ -0.31
TRIO-206ENST00000504606 CATSPERGQ6ZRH7 1159 aa13.09□□□□□ -0.31
TRIO-206ENST00000504606 RASAL3Q86YV0 1011 aa13.09□□□□□ -0.31
TRIO-206ENST00000504606 ZNF713Q8N859 430 aaPredicted RBP13.09□□□□□ -0.31
TRIO-206ENST00000504606 PRPF38AQ8NAV1 312 aaKnown RBP13.09□□□□□ -0.31
TRIO-206ENST00000504606 RANBP17Q9H2T7 1088 aaKnown RBP13.09□□□□□ -0.31
TRIO-206ENST00000504606 BARHL2Q9NY43 387 aa13.09□□□□□ -0.31
TRIO-206ENST00000504606 PPP1R9AQ9ULJ8 1098 aa13.09□□□□□ -0.31
TRIO-206ENST00000504606 ABT1Q9ULW3 272 aaKnown RBP13.09□□□□□ -0.31
TRIO-206ENST00000504606 KCNJ14Q9UNX9 436 aa13.09□□□□□ -0.31
TRIO-206ENST00000504606 ZDHHC9Q9Y397 364 aa13.09□□□□□ -0.31
TRIO-206ENST00000504606 PARP14Q460N5 1801 aa13.09□□□□□ -0.31
TRIO-206ENST00000504606 STXBP3O00186 592 aa13.08□□□□□ -0.32
TRIO-206ENST00000504606 PPP1R11O60927 126 aaPredicted RBP13.08□□□□□ -0.32
TRIO-206ENST00000504606 F13A1P00488 732 aa13.08□□□□□ -0.32
TRIO-206ENST00000504606 MMP1P03956 469 aa13.08□□□□□ -0.32
TRIO-206ENST00000504606 DSG3P32926 999 aa13.08□□□□□ -0.32
TRIO-206ENST00000504606 GTF2A2P52657 109 aa13.08□□□□□ -0.32
TRIO-206ENST00000504606 NLRP5P59047 1200 aa13.08□□□□□ -0.32
TRIO-206ENST00000504606 COG2Q14746 738 aa13.08□□□□□ -0.32
TRIO-206ENST00000504606 SAFBQ15424 915 aaKnown RBP eCLIP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms