RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 CHRM1P11229 460 aaPredicted RBP13.94□□□□□ -0.18
PDLIM5-208ENST00000504489 BCRP11274 1271 aa13.94□□□□□ -0.18
PDLIM5-208ENST00000504489 TMEM106CQ9BVX2 250 aa13.94□□□□□ -0.18
PDLIM5-208ENST00000504489 SENP2Q9HC62 589 aa13.94□□□□□ -0.18
PDLIM5-208ENST00000504489 ZSWIM6Q9HCJ5 1215 aa13.94□□□□□ -0.18
PDLIM5-208ENST00000504489 PLXNA1Q9UIW2 1896 aa13.94□□□□□ -0.18
PDLIM5-208ENST00000504489 TSKSQ9UJT2 592 aa13.94□□□□□ -0.18
PDLIM5-208ENST00000504489 FEM1BQ9UK73 627 aa13.94□□□□□ -0.18
PDLIM5-208ENST00000504489 PCDHB8Q9UN66 801 aa13.94□□□□□ -0.18
PDLIM5-208ENST00000504489 SPDYE16A6NNV3 312 aaPredicted RBP13.93□□□□□ -0.18
PDLIM5-208ENST00000504489 CASTP20810 708 aaKnown RBP13.93□□□□□ -0.18
PDLIM5-208ENST00000504489 RPS6KB1P23443 525 aa13.93□□□□□ -0.18
PDLIM5-208ENST00000504489 ZNF543Q08ER8 600 aa13.93□□□□□ -0.18
PDLIM5-208ENST00000504489 RUFY3Q7L099 469 aa13.93□□□□□ -0.18
PDLIM5-208ENST00000504489 SGMS1Q86VZ5 419 aa13.93□□□□□ -0.18
PDLIM5-208ENST00000504489 FBXL16Q8N461 479 aa13.93□□□□□ -0.18
PDLIM5-208ENST00000504489 PRPF38AQ8NAV1 312 aaKnown RBP13.93□□□□□ -0.18
PDLIM5-208ENST00000504489 CHURC1Q8WUH1 139 aa13.93□□□□□ -0.18
PDLIM5-208ENST00000504489 BACH2Q9BYV9 841 aa13.93□□□□□ -0.18
PDLIM5-208ENST00000504489 GPHNQ9NQX3 736 aaPredicted RBP13.93□□□□□ -0.18
PDLIM5-208ENST00000504489 FBXO28Q9NVF7 368 aa13.93□□□□□ -0.18
PDLIM5-208ENST00000504489 MORF4L1Q9UBU8 362 aa13.93□□□□□ -0.18
PDLIM5-208ENST00000504489 CPA4Q9UI42 421 aa13.93□□□□□ -0.18
PDLIM5-208ENST00000504489 PPP1R9AQ9ULJ8 1098 aa13.93□□□□□ -0.18
PDLIM5-208ENST00000504489 ADAMTS5Q9UNA0 930 aa13.93□□□□□ -0.18
PDLIM5-208ENST00000504489 RABGAP1Q9Y3P9 1069 aa13.93□□□□□ -0.18
PDLIM5-208ENST00000504489 CYP46A1Q9Y6A2 500 aa13.93□□□□□ -0.18
PDLIM5-208ENST00000504489 SP3Q02447 781 aa13.92□□□□□ -0.18
PDLIM5-208ENST00000504489 TROAPQ12815 778 aa13.92□□□□□ -0.18
PDLIM5-208ENST00000504489 FAM110CQ1W6H9 321 aa13.92□□□□□ -0.18
PDLIM5-208ENST00000504489 CCDC96Q2M329 555 aa13.92□□□□□ -0.18
PDLIM5-208ENST00000504489 GPATCH4Q5T3I0 446 aaKnown RBP13.92□□□□□ -0.18
PDLIM5-208ENST00000504489 POTEEQ6S8J3 1075 aa13.92□□□□□ -0.18
PDLIM5-208ENST00000504489 BTNL9Q6UXG8 535 aa13.92□□□□□ -0.18
PDLIM5-208ENST00000504489 KCTD1Q719H9 257 aa13.92□□□□□ -0.18
PDLIM5-208ENST00000504489 RASGRP2Q7LDG7 609 aa13.92□□□□□ -0.18
PDLIM5-208ENST00000504489 CATIPQ7Z7H3 387 aa13.92□□□□□ -0.18
PDLIM5-208ENST00000504489 ZNF467Q7Z7K2 595 aaPredicted RBP13.92□□□□□ -0.18
PDLIM5-208ENST00000504489 FAM160B2Q86V87 743 aa13.92□□□□□ -0.18
PDLIM5-208ENST00000504489 MB21D1Q8N884 522 aa13.92□□□□□ -0.18
PDLIM5-208ENST00000504489 TCEANC2Q96MN5 208 aa13.92□□□□□ -0.18
PDLIM5-208ENST00000504489 MAP3K14Q99558 947 aa13.92□□□□□ -0.18
PDLIM5-208ENST00000504489 SLF1Q9BQI6 1058 aa13.92□□□□□ -0.18
PDLIM5-208ENST00000504489 LRRC2Q9BYS8 371 aa13.92□□□□□ -0.18
PDLIM5-208ENST00000504489 AGXT2Q9BYV1 514 aa13.92□□□□□ -0.18
PDLIM5-208ENST00000504489 RBPJLQ9UBG7 517 aa13.92□□□□□ -0.18
PDLIM5-208ENST00000504489 MTMR7Q9Y216 660 aa13.92□□□□□ -0.18
PDLIM5-208ENST00000504489 CCDC69A6NI79 296 aa13.91□□□□□ -0.18
PDLIM5-208ENST00000504489 TMEM232C9JQI7 657 aa13.91□□□□□ -0.18
PDLIM5-208ENST00000504489 FKTNO75072 461 aa13.91□□□□□ -0.18
PDLIM5-208ENST00000504489 FDX1P10109 184 aa13.91□□□□□ -0.18
PDLIM5-208ENST00000504489 CPA1P15085 419 aa13.91□□□□□ -0.18
PDLIM5-208ENST00000504489 RBM25P49756 843 aaKnown RBP13.91□□□□□ -0.18
PDLIM5-208ENST00000504489 STAT2P52630 851 aa13.91□□□□□ -0.18
PDLIM5-208ENST00000504489 ASPRV1Q53RT3 343 aa13.91□□□□□ -0.18
PDLIM5-208ENST00000504489 ZNF654Q8IZM8 581 aa13.91□□□□□ -0.18
PDLIM5-208ENST00000504489 ANKRD13CQ8N6S4 541 aa13.91□□□□□ -0.18
PDLIM5-208ENST00000504489 ATG4CQ96DT6 458 aa13.91□□□□□ -0.18
PDLIM5-208ENST00000504489 C22orf23Q9BZE7 217 aa13.91□□□□□ -0.18
PDLIM5-208ENST00000504489 UPF2Q9HAU5 1272 aaKnown RBP13.91□□□□□ -0.18
PDLIM5-208ENST00000504489 RBBP6Q7Z6E9 1792 aaKnown RBP13.91□□□□□ -0.18
PDLIM5-208ENST00000504489 POTEB2H3BUK9 544 aa13.9□□□□□ -0.18
PDLIM5-208ENST00000504489 VWA5AO00534 786 aa13.9□□□□□ -0.18
PDLIM5-208ENST00000504489 CNMDO75829 334 aa13.9□□□□□ -0.18
PDLIM5-208ENST00000504489 DDAH1O94760 285 aa13.9□□□□□ -0.18
PDLIM5-208ENST00000504489 PARP1P09874 1014 aaKnown RBP13.9□□□□□ -0.18
PDLIM5-208ENST00000504489 LBX1P52954 281 aa13.9□□□□□ -0.18
PDLIM5-208ENST00000504489 GRM4Q14833 912 aa13.9□□□□□ -0.18
PDLIM5-208ENST00000504489 TTBK2Q6IQ55 1244 aa13.9□□□□□ -0.18
PDLIM5-208ENST00000504489 NFXL1Q6ZNB6 911 aa13.9□□□□□ -0.18
PDLIM5-208ENST00000504489 Q6ZUG5 572 aa13.9□□□□□ -0.18
PDLIM5-208ENST00000504489 GPRC5AQ8NFJ5 357 aa13.9□□□□□ -0.18
PDLIM5-208ENST00000504489 ZNF296Q8WUU4 475 aaPredicted RBP13.9□□□□□ -0.18
PDLIM5-208ENST00000504489 CHMP4CQ96CF2 233 aa13.9□□□□□ -0.18
PDLIM5-208ENST00000504489 TXNRD2Q9NNW7 524 aa13.9□□□□□ -0.18
PDLIM5-208ENST00000504489 GPCPD1Q9NPB8 672 aa13.9□□□□□ -0.18
PDLIM5-208ENST00000504489 BTBD7Q9P203 1132 aa13.9□□□□□ -0.18
PDLIM5-208ENST00000504489 ISY1Q9ULR0 285 aaKnown RBP13.9□□□□□ -0.18
PDLIM5-208ENST00000504489 FRMPD2Q68DX3 1309 aaPredicted RBP13.9□□□□□ -0.19
PDLIM5-208ENST00000504489 PALM3A6NDB9 673 aaPredicted RBP13.89□□□□□ -0.19
PDLIM5-208ENST00000504489 CALM1P0DP23 149 aa13.89□□□□□ -0.19
PDLIM5-208ENST00000504489 CALM2P0DP24 149 aa13.89□□□□□ -0.19
PDLIM5-208ENST00000504489 CALM3P0DP25 149 aa13.89□□□□□ -0.19
PDLIM5-208ENST00000504489 ERVK-9P63128 1117 aa13.89□□□□□ -0.19
PDLIM5-208ENST00000504489 ERVK-24P63145 666 aa13.89□□□□□ -0.19
PDLIM5-208ENST00000504489 LACTBP83111 547 aaPredicted RBP13.89□□□□□ -0.19
PDLIM5-208ENST00000504489 FGD1P98174 961 aa13.89□□□□□ -0.19
PDLIM5-208ENST00000504489 IKQ13123 557 aaPredicted RBP13.89□□□□□ -0.19
PDLIM5-208ENST00000504489 REPS2Q8NFH8 660 aa13.89□□□□□ -0.19
PDLIM5-208ENST00000504489 KIFC2Q96AC6 838 aa13.89□□□□□ -0.19
PDLIM5-208ENST00000504489 ERO1AQ96HE7 468 aa13.89□□□□□ -0.19
PDLIM5-208ENST00000504489 PAGR1Q9BTK6 254 aa13.89□□□□□ -0.19
PDLIM5-208ENST00000504489 UPF3BQ9BZI7 483 aaKnown RBP13.89□□□□□ -0.19
PDLIM5-208ENST00000504489 ALDH8A1Q9H2A2 487 aaPredicted RBP13.89□□□□□ -0.19
PDLIM5-208ENST00000504489 PRDM10Q9NQV6 1147 aa13.89□□□□□ -0.19
PDLIM5-208ENST00000504489 MAD2L2Q9UI95 211 aa13.89□□□□□ -0.19
PDLIM5-208ENST00000504489 PRR12Q9ULL5 1215 aa13.89□□□□□ -0.19
PDLIM5-208ENST00000504489 SLC12A7Q9Y666 1083 aa13.89□□□□□ -0.19
PDLIM5-208ENST00000504489 ZNF236Q9UL36 1845 aa13.88□□□□□ -0.19
PDLIM5-208ENST00000504489 ZBED4O75132 1171 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms