RNA–Protein interactions for RNA: ENST00000503621.5

CLDND1-209, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-209ENST00000503621 FBXO28Q9NVF7 368 aa20.27■□□□□ 0.84
CLDND1-209ENST00000503621 ZSWIM8A7E2V4 1837 aa20.27■□□□□ 0.84
CLDND1-209ENST00000503621 PLXNB2O15031 1838 aa20.27■□□□□ 0.84
CLDND1-209ENST00000503621 TNKSO95271 1327 aa20.27■□□□□ 0.83
CLDND1-209ENST00000503621 IGHA2P01877 340 aa20.26■□□□□ 0.83
CLDND1-209ENST00000503621 MCCP23508 829 aa20.26■□□□□ 0.83
CLDND1-209ENST00000503621 GRK4P32298 578 aa20.26■□□□□ 0.83
CLDND1-209ENST00000503621 STAT3P40763 770 aa20.26■□□□□ 0.83
CLDND1-209ENST00000503621 ZNF543Q08ER8 600 aa20.26■□□□□ 0.83
CLDND1-209ENST00000503621 KRT32Q14532 448 aa20.26■□□□□ 0.83
CLDND1-209ENST00000503621 STOX1Q6ZVD7 989 aa20.26■□□□□ 0.83
CLDND1-209ENST00000503621 PNMA1Q8ND90 353 aa20.26■□□□□ 0.83
CLDND1-209ENST00000503621 RAET1EQ8TD07 263 aa20.26■□□□□ 0.83
CLDND1-209ENST00000503621 TMEM87BQ96K49 555 aa20.26■□□□□ 0.83
CLDND1-209ENST00000503621 TMEM232C9JQI7 657 aa20.25■□□□□ 0.83
CLDND1-209ENST00000503621 ZBED4O75132 1171 aa20.25■□□□□ 0.83
CLDND1-209ENST00000503621 RGS19P49795 217 aa20.25■□□□□ 0.83
CLDND1-209ENST00000503621 TKFCQ3LXA3 575 aa20.25■□□□□ 0.83
CLDND1-209ENST00000503621 SLC9C1Q4G0N8 1177 aa20.25■□□□□ 0.83
CLDND1-209ENST00000503621 ASPRV1Q53RT3 343 aa20.25■□□□□ 0.83
CLDND1-209ENST00000503621 CCAR1Q8IX12 1150 aaKnown RBP20.25■□□□□ 0.83
CLDND1-209ENST00000503621 NUP88Q99567 741 aaPredicted RBP20.25■□□□□ 0.83
CLDND1-209ENST00000503621 KAT14Q9H8E8 782 aa20.25■□□□□ 0.83
CLDND1-209ENST00000503621 FBXO40Q9UH90 709 aa20.25■□□□□ 0.83
CLDND1-209ENST00000503621 GABRQQ9UN88 632 aa20.25■□□□□ 0.83
CLDND1-209ENST00000503621 DIS3Q9Y2L1 958 aaKnown RBP20.25■□□□□ 0.83
CLDND1-209ENST00000503621 RBBP6Q7Z6E9 1792 aaKnown RBP20.25■□□□□ 0.83
CLDND1-209ENST00000503621 HMGB1P09429 215 aaKnown RBP20.24■□□□□ 0.83
CLDND1-209ENST00000503621 ZKSCAN1P17029 563 aaPredicted RBP20.24■□□□□ 0.83
CLDND1-209ENST00000503621 MCM5P33992 734 aa20.24■□□□□ 0.83
CLDND1-209ENST00000503621 HSPA4P34932 840 aa20.24■□□□□ 0.83
CLDND1-209ENST00000503621 RGS2P41220 211 aa20.24■□□□□ 0.83
CLDND1-209ENST00000503621 LIFRP42702 1097 aa20.24■□□□□ 0.83
CLDND1-209ENST00000503621 MAP2K5Q13163 448 aa20.24■□□□□ 0.83
CLDND1-209ENST00000503621 IFIT1BQ5T764 474 aaKnown RBP20.24■□□□□ 0.83
CLDND1-209ENST00000503621 CYB5R4Q7L1T6 521 aa20.24■□□□□ 0.83
CLDND1-209ENST00000503621 FBXL16Q8N461 479 aa20.24■□□□□ 0.83
CLDND1-209ENST00000503621 CHST13Q8NET6 341 aa20.24■□□□□ 0.83
CLDND1-209ENST00000503621 IGDCC4Q8TDY8 1250 aa20.24■□□□□ 0.83
CLDND1-209ENST00000503621 IVNS1ABPQ9Y6Y0 642 aa20.24■□□□□ 0.83
CLDND1-209ENST00000503621 COL11A1P12107 1806 aaPredicted RBP20.24■□□□□ 0.83
CLDND1-209ENST00000503621 ERICH2A1L162 156 aa20.23■□□□□ 0.83
CLDND1-209ENST00000503621 ADCY3O60266 1144 aa20.23■□□□□ 0.83
CLDND1-209ENST00000503621 ERCC3P19447 782 aa20.23■□□□□ 0.83
CLDND1-209ENST00000503621 APBA2Q99767 749 aa20.23■□□□□ 0.83
CLDND1-209ENST00000503621 SLC5A4Q9NY91 659 aa20.23■□□□□ 0.83
CLDND1-209ENST00000503621 RANBP17Q9H2T7 1088 aaKnown RBP20.22■□□□□ 0.83
CLDND1-209ENST00000503621 PRR12Q9ULL5 1215 aa20.22■□□□□ 0.83
CLDND1-209ENST00000503621 TAF6LQ9Y6J9 622 aa20.22■□□□□ 0.83
CLDND1-209ENST00000503621 CENPFP49454 3210 aa20.21■□□□□ 0.83
CLDND1-209ENST00000503621 RAD21O60216 631 aa20.21■□□□□ 0.83
CLDND1-209ENST00000503621 HMGCRP04035 888 aa20.21■□□□□ 0.83
CLDND1-209ENST00000503621 SMARCA1P28370 1054 aa20.21■□□□□ 0.83
CLDND1-209ENST00000503621 ANTXR2P58335 489 aa20.21■□□□□ 0.83
CLDND1-209ENST00000503621 UBXN2AP68543 259 aa20.21■□□□□ 0.83
CLDND1-209ENST00000503621 MAP3K21Q5TCX8 1036 aa20.21■□□□□ 0.83
CLDND1-209ENST00000503621 OLFML2BQ68BL8 750 aa20.21■□□□□ 0.83
CLDND1-209ENST00000503621 SGMS1Q86VZ5 419 aa20.21■□□□□ 0.83
CLDND1-209ENST00000503621 MSL3Q8N5Y2 521 aaKnown RBP20.21■□□□□ 0.83
CLDND1-209ENST00000503621 IFIT3O14879 490 aaKnown RBP20.2■□□□□ 0.82
CLDND1-209ENST00000503621 ICAM1P05362 532 aa20.2■□□□□ 0.82
CLDND1-209ENST00000503621 FCER1AP12319 257 aa20.2■□□□□ 0.82
CLDND1-209ENST00000503621 RCAN1P53805 252 aa20.2■□□□□ 0.82
CLDND1-209ENST00000503621 TROAPQ12815 778 aa20.2■□□□□ 0.82
CLDND1-209ENST00000503621 SYDE2Q5VT97 1194 aa20.2■□□□□ 0.82
CLDND1-209ENST00000503621 KCTD1Q719H9 257 aa20.2■□□□□ 0.82
CLDND1-209ENST00000503621 KIFC2Q96AC6 838 aa20.2■□□□□ 0.82
CLDND1-209ENST00000503621 ZKSCAN3Q9BRR0 538 aa20.2■□□□□ 0.82
CLDND1-209ENST00000503621 NRBP1Q9UHY1 535 aa20.2■□□□□ 0.82
CLDND1-209ENST00000503621 ZNF536O15090 1300 aa20.2■□□□□ 0.82
CLDND1-209ENST00000503621 PEX10O60683 326 aa20.19■□□□□ 0.82
CLDND1-209ENST00000503621 EXOSC10Q01780 885 aaKnown RBP20.19■□□□□ 0.82
CLDND1-209ENST00000503621 WTAPQ15007 396 aa20.19■□□□□ 0.82
CLDND1-209ENST00000503621 ZNF467Q7Z7K2 595 aaPredicted RBP20.19■□□□□ 0.82
CLDND1-209ENST00000503621 IL17RAQ96F46 866 aa20.19■□□□□ 0.82
CLDND1-209ENST00000503621 NEK1Q96PY6 1258 aa20.19■□□□□ 0.82
CLDND1-209ENST00000503621 CTDP1Q9Y5B0 961 aaPredicted RBP20.19■□□□□ 0.82
CLDND1-209ENST00000503621 DNAJC25-GNG10A0A024R161 153 aa20.18■□□□□ 0.82
CLDND1-209ENST00000503621 LOC102724159A0A0B4J2E5 919 aa20.18■□□□□ 0.82
CLDND1-209ENST00000503621 PALM3A6NDB9 673 aaPredicted RBP20.18■□□□□ 0.82
CLDND1-209ENST00000503621 DDAH1O94760 285 aa20.18■□□□□ 0.82
CLDND1-209ENST00000503621 PARP1P09874 1014 aaKnown RBP20.18■□□□□ 0.82
CLDND1-209ENST00000503621 ADORA2AP29274 412 aa20.18■□□□□ 0.82
CLDND1-209ENST00000503621 PWP2Q15269 919 aaKnown RBP20.18■□□□□ 0.82
CLDND1-209ENST00000503621 CCDC96Q2M329 555 aa20.18■□□□□ 0.82
CLDND1-209ENST00000503621 SNRNP48Q6IEG0 339 aaKnown RBP20.18■□□□□ 0.82
CLDND1-209ENST00000503621 DHX32Q7L7V1 743 aaKnown RBP20.18■□□□□ 0.82
CLDND1-209ENST00000503621 MTMR8Q96EF0 704 aa20.18■□□□□ 0.82
CLDND1-209ENST00000503621 USP26Q9BXU7 913 aa20.18■□□□□ 0.82
CLDND1-209ENST00000503621 LY9Q9HBG7 655 aa20.18■□□□□ 0.82
CLDND1-209ENST00000503621 KIAA0100Q14667 2235 aaKnown RBP20.18■□□□□ 0.82
CLDND1-209ENST00000503621 TRAF1Q13077 416 aa20.17■□□□□ 0.82
CLDND1-209ENST00000503621 PLS1Q14651 629 aa20.17■□□□□ 0.82
CLDND1-209ENST00000503621 KCTD2Q14681 263 aa20.17■□□□□ 0.82
CLDND1-209ENST00000503621 TMEM67Q5HYA8 995 aa20.17■□□□□ 0.82
CLDND1-209ENST00000503621 NCAPG2Q86XI2 1143 aa20.17■□□□□ 0.82
CLDND1-209ENST00000503621 RASEFQ8IZ41 740 aa20.17■□□□□ 0.82
CLDND1-209ENST00000503621 RGS22Q8NE09 1264 aa20.17■□□□□ 0.82
CLDND1-209ENST00000503621 CWC22Q9HCG8 908 aaKnown RBP20.17■□□□□ 0.82
CLDND1-209ENST00000503621 PAK6Q9NQU5 681 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms