RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 TRAK2O60296 914 aa7.97□□□□□ -1.13
TOPBP1-203ENST00000503464 POTEJP0CG39 1038 aa7.97□□□□□ -1.13
TOPBP1-203ENST00000503464 TOB1P50616 345 aaPredicted RBP7.97□□□□□ -1.13
TOPBP1-203ENST00000503464 DGKZQ13574 1117 aa7.97□□□□□ -1.13
TOPBP1-203ENST00000503464 CCDC96Q2M329 555 aa7.97□□□□□ -1.13
TOPBP1-203ENST00000503464 PPP4R3BQ5MIZ7 849 aa7.97□□□□□ -1.13
TOPBP1-203ENST00000503464 GPATCH4Q5T3I0 446 aaKnown RBP7.97□□□□□ -1.13
TOPBP1-203ENST00000503464 MYSM1Q5VVJ2 828 aa7.97□□□□□ -1.13
TOPBP1-203ENST00000503464 USP50Q70EL3 339 aaPredicted RBP7.97□□□□□ -1.13
TOPBP1-203ENST00000503464 DIS3L2Q8IYB7 885 aaKnown RBP7.97□□□□□ -1.13
TOPBP1-203ENST00000503464 ADGRF4Q8IZF3 695 aa7.97□□□□□ -1.13
TOPBP1-203ENST00000503464 SPICE1Q8N0Z3 855 aa7.97□□□□□ -1.13
TOPBP1-203ENST00000503464 ZNF579Q8NAF0 562 aaKnown RBP7.97□□□□□ -1.13
TOPBP1-203ENST00000503464 LEO1Q8WVC0 666 aaPredicted RBP7.97□□□□□ -1.13
TOPBP1-203ENST00000503464 PIGSQ96S52 555 aa7.97□□□□□ -1.13
TOPBP1-203ENST00000503464 ZNF341Q9BYN7 854 aa7.97□□□□□ -1.13
TOPBP1-203ENST00000503464 TAF1DQ9H5J8 278 aaPredicted RBP7.97□□□□□ -1.13
TOPBP1-203ENST00000503464 CABP5Q9NP86 173 aa7.97□□□□□ -1.13
TOPBP1-203ENST00000503464 ATP6V1DQ9Y5K8 247 aa7.97□□□□□ -1.13
TOPBP1-203ENST00000503464 MYH7BA7E2Y1 1941 aa7.97□□□□□ -1.13
TOPBP1-203ENST00000503464 ELP1O95163 1332 aa7.97□□□□□ -1.13
TOPBP1-203ENST00000503464 A0A0G2JMZ2 1700 aa7.96□□□□□ -1.14
TOPBP1-203ENST00000503464 USP17L10C9JJH3 530 aa7.96□□□□□ -1.14
TOPBP1-203ENST00000503464 CTNND1O60716 968 aaKnown RBP7.96□□□□□ -1.14
TOPBP1-203ENST00000503464 ASNSP08243 561 aa7.96□□□□□ -1.14
TOPBP1-203ENST00000503464 NCLP19338 710 aaKnown RBP7.96□□□□□ -1.14
TOPBP1-203ENST00000503464 SLC1A4P43007 532 aa7.96□□□□□ -1.14
TOPBP1-203ENST00000503464 KRT85P78386 507 aa7.96□□□□□ -1.14
TOPBP1-203ENST00000503464 AKAP17AQ02040 695 aaKnown RBP7.96□□□□□ -1.14
TOPBP1-203ENST00000503464 TRIM29Q14134 588 aa7.96□□□□□ -1.14
TOPBP1-203ENST00000503464 DPY19L2Q6NUT2 758 aa7.96□□□□□ -1.14
TOPBP1-203ENST00000503464 BTNL9Q6UXG8 535 aa7.96□□□□□ -1.14
TOPBP1-203ENST00000503464 BRAPQ7Z569 592 aa7.96□□□□□ -1.14
TOPBP1-203ENST00000503464 HOMER1Q86YM7 354 aa7.96□□□□□ -1.14
TOPBP1-203ENST00000503464 NOSTRINQ8IVI9 506 aa7.96□□□□□ -1.14
TOPBP1-203ENST00000503464 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.96□□□□□ -1.14
TOPBP1-203ENST00000503464 ZKSCAN4Q969J2 545 aaPredicted RBP7.96□□□□□ -1.14
TOPBP1-203ENST00000503464 KLRG1Q96E93 195 aa7.96□□□□□ -1.14
TOPBP1-203ENST00000503464 PGBD1Q96JS3 809 aa7.96□□□□□ -1.14
TOPBP1-203ENST00000503464 WRNIP1Q96S55 665 aa7.96□□□□□ -1.14
TOPBP1-203ENST00000503464 FOXP1Q9H334 677 aaPredicted RBP7.96□□□□□ -1.14
TOPBP1-203ENST00000503464 VCPKMTQ9H867 229 aa7.96□□□□□ -1.14
TOPBP1-203ENST00000503464 ARHGEF10LQ9HCE6 1279 aa7.96□□□□□ -1.14
TOPBP1-203ENST00000503464 VAT1LQ9HCJ6 419 aa7.96□□□□□ -1.14
TOPBP1-203ENST00000503464 BARHL2Q9NY43 387 aa7.96□□□□□ -1.14
TOPBP1-203ENST00000503464 RTEL1Q9NZ71 1219 aa7.96□□□□□ -1.14
TOPBP1-203ENST00000503464 RBM27Q9P2N5 1060 aaKnown RBP7.96□□□□□ -1.14
TOPBP1-203ENST00000503464 CLIC4Q9Y696 253 aa7.96□□□□□ -1.14
TOPBP1-203ENST00000503464 USP2O75604 605 aaPredicted RBP7.95□□□□□ -1.14
TOPBP1-203ENST00000503464 BMP3P12645 472 aa7.95□□□□□ -1.14
TOPBP1-203ENST00000503464 TAL1P17542 331 aaPredicted RBP7.95□□□□□ -1.14
TOPBP1-203ENST00000503464 PTPRAP18433 802 aa7.95□□□□□ -1.14
TOPBP1-203ENST00000503464 KRT2P35908 639 aa7.95□□□□□ -1.14
TOPBP1-203ENST00000503464 NASPP49321 788 aaPredicted RBP7.95□□□□□ -1.14
TOPBP1-203ENST00000503464 SNAP25P60880 206 aa7.95□□□□□ -1.14
TOPBP1-203ENST00000503464 CEBPZQ03701 1054 aaKnown RBP7.95□□□□□ -1.14
TOPBP1-203ENST00000503464 PTPAQ15257 358 aa7.95□□□□□ -1.14
TOPBP1-203ENST00000503464 ZYXQ15942 572 aaKnown RBP7.95□□□□□ -1.14
TOPBP1-203ENST00000503464 QRICH1Q2TAL8 776 aa7.95□□□□□ -1.14
TOPBP1-203ENST00000503464 KLHL40Q2TBA0 621 aa7.95□□□□□ -1.14
TOPBP1-203ENST00000503464 NOL9Q5SY16 702 aaKnown RBP7.95□□□□□ -1.14
TOPBP1-203ENST00000503464 FAM83BQ5T0W9 1011 aa7.95□□□□□ -1.14
TOPBP1-203ENST00000503464 DCAF15Q66K64 600 aa7.95□□□□□ -1.14
TOPBP1-203ENST00000503464 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.95□□□□□ -1.14
TOPBP1-203ENST00000503464 KRT26Q7Z3Y9 468 aa7.95□□□□□ -1.14
TOPBP1-203ENST00000503464 HEATR3Q7Z4Q2 680 aa7.95□□□□□ -1.14
TOPBP1-203ENST00000503464 SCYL3Q8IZE3 742 aa7.95□□□□□ -1.14
TOPBP1-203ENST00000503464 DAGLBQ8NCG7 672 aa7.95□□□□□ -1.14
TOPBP1-203ENST00000503464 RASGRP4Q8TDF6 673 aa7.95□□□□□ -1.14
TOPBP1-203ENST00000503464 DCPSQ96C86 337 aaKnown RBP7.95□□□□□ -1.14
TOPBP1-203ENST00000503464 RRP36Q96EU6 259 aaKnown RBP7.95□□□□□ -1.14
TOPBP1-203ENST00000503464 CDCA5Q96FF9 252 aa7.95□□□□□ -1.14
TOPBP1-203ENST00000503464 ZMYND12Q9H0C1 365 aa7.95□□□□□ -1.14
TOPBP1-203ENST00000503464 SH3GLB2Q9NR46 395 aa7.95□□□□□ -1.14
TOPBP1-203ENST00000503464 GINM1Q9NU53 330 aa7.95□□□□□ -1.14
TOPBP1-203ENST00000503464 POLR3EQ9NVU0 708 aa7.95□□□□□ -1.14
TOPBP1-203ENST00000503464 RCOR1Q9UKL0 485 aa7.95□□□□□ -1.14
TOPBP1-203ENST00000503464 SNCAIPQ9Y6H5 919 aa7.95□□□□□ -1.14
TOPBP1-203ENST00000503464 PNMA6FA0A0J9YX94 578 aa7.94□□□□□ -1.14
TOPBP1-203ENST00000503464 ESYT2A0FGR8 921 aa7.94□□□□□ -1.14
TOPBP1-203ENST00000503464 TMEM232C9JQI7 657 aa7.94□□□□□ -1.14
TOPBP1-203ENST00000503464 GOLGA6L22H0YM25 854 aa7.94□□□□□ -1.14
TOPBP1-203ENST00000503464 ZBTB5O15062 677 aa7.94□□□□□ -1.14
TOPBP1-203ENST00000503464 RAD21O60216 631 aa7.94□□□□□ -1.14
TOPBP1-203ENST00000503464 NLRP5P59047 1200 aa7.94□□□□□ -1.14
TOPBP1-203ENST00000503464 FMR1Q06787 632 aaKnown RBP eCLIP7.94□□□□□ -1.14
TOPBP1-203ENST00000503464 MTMR2Q13614 643 aa7.94□□□□□ -1.14
TOPBP1-203ENST00000503464 PRKG1Q13976 671 aa7.94□□□□□ -1.14
TOPBP1-203ENST00000503464 VGLL4Q14135 290 aa7.94□□□□□ -1.14
TOPBP1-203ENST00000503464 CDC37Q16543 378 aaPredicted RBP7.94□□□□□ -1.14
TOPBP1-203ENST00000503464 ANO1Q5XXA6 986 aa7.94□□□□□ -1.14
TOPBP1-203ENST00000503464 ATL3Q6DD88 541 aa7.94□□□□□ -1.14
TOPBP1-203ENST00000503464 MOB2Q70IA6 237 aa7.94□□□□□ -1.14
TOPBP1-203ENST00000503464 SULF1Q8IWU6 871 aa7.94□□□□□ -1.14
TOPBP1-203ENST00000503464 LINC00301Q8NCQ3 95 aa7.94□□□□□ -1.14
TOPBP1-203ENST00000503464 ZC3H15Q8WU90 426 aaKnown RBP7.94□□□□□ -1.14
TOPBP1-203ENST00000503464 COA7Q96BR5 231 aa7.94□□□□□ -1.14
TOPBP1-203ENST00000503464 SPATA32Q96LK8 384 aa7.94□□□□□ -1.14
TOPBP1-203ENST00000503464 ZNF396Q96N95 335 aaPredicted RBP7.94□□□□□ -1.14
TOPBP1-203ENST00000503464 WDR18Q9BV38 432 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms