RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 COG6Q9Y2V7 657 aa7.31□□□□□ -1.24
LSM3P4-201ENST00000502948 MCM3APO60318 1980 aa7.3□□□□□ -1.24
LSM3P4-201ENST00000502948 LOC102724159A0A0B4J2E5 919 aa7.3□□□□□ -1.24
LSM3P4-201ENST00000502948 SNAI1O95863 264 aaPredicted RBP7.3□□□□□ -1.24
LSM3P4-201ENST00000502948 ADCYAP1R1P41586 468 aa7.3□□□□□ -1.24
LSM3P4-201ENST00000502948 ATN1P54259 1190 aaPredicted RBP7.3□□□□□ -1.24
LSM3P4-201ENST00000502948 PWP2Q15269 919 aaKnown RBP7.3□□□□□ -1.24
LSM3P4-201ENST00000502948 SHHQ15465 462 aa7.3□□□□□ -1.24
LSM3P4-201ENST00000502948 TRIM60Q495X7 471 aa7.3□□□□□ -1.24
LSM3P4-201ENST00000502948 FAM47AQ5JRC9 791 aa7.3□□□□□ -1.24
LSM3P4-201ENST00000502948 FAM83BQ5T0W9 1011 aa7.3□□□□□ -1.24
LSM3P4-201ENST00000502948 DIEXFQ68CQ4 756 aaKnown RBP7.3□□□□□ -1.24
LSM3P4-201ENST00000502948 Q7L0L9 218 aa7.3□□□□□ -1.24
LSM3P4-201ENST00000502948 PCSK9Q8NBP7 692 aaKnown RBP7.3□□□□□ -1.24
LSM3P4-201ENST00000502948 GPATCH3Q96I76 525 aa7.3□□□□□ -1.24
LSM3P4-201ENST00000502948 UPF3AQ9H1J1 476 aaKnown RBP7.3□□□□□ -1.24
LSM3P4-201ENST00000502948 SEMA6BQ9H3T3 888 aa7.3□□□□□ -1.24
LSM3P4-201ENST00000502948 ABHD16BQ9H3Z7 469 aa7.3□□□□□ -1.24
LSM3P4-201ENST00000502948 SLC38A10Q9HBR0 1119 aa7.3□□□□□ -1.24
LSM3P4-201ENST00000502948 FEM1BQ9UK73 627 aa7.3□□□□□ -1.24
LSM3P4-201ENST00000502948 RCAN3Q9UKA8 241 aa7.3□□□□□ -1.24
LSM3P4-201ENST00000502948 FAM184BQ9ULE4 1060 aa7.3□□□□□ -1.24
LSM3P4-201ENST00000502948 ATP11BQ9Y2G3 1177 aa7.3□□□□□ -1.24
LSM3P4-201ENST00000502948 UNC80Q8N2C7 3258 aa7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 CYP2D7A0A087X1C5 515 aa7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 A0A1W2PQ45 241 aaPredicted RBP7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 A0A1W2PQY0 241 aa7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 TRIM43BA6NCK2 446 aa7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 DCDC2CA8MYV0 355 aa7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 PATL2C9JE40 543 aaKnown RBP7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 RNF113AO15541 343 aaKnown RBP7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 GPAA1O43292 621 aa7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 ZBED4O75132 1171 aa7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 TTLL1O95922 423 aa7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 NDUFB10O96000 172 aa7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 NOVP48745 357 aa7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 CDK7P50613 346 aa7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 ACLYP53396 1101 aa7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 GJA9P57773 515 aa7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 TLE2Q04725 743 aa7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 TKFCQ3LXA3 575 aa7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 PRAMEF19Q5SWL8 479 aa7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 CCDC174Q6PII3 467 aa7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 CLEC10AQ8IUN9 316 aa7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 ZNF444Q8N0Y2 327 aaPredicted RBP7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 NEDD1Q8NHV4 660 aa7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 BADQ92934 168 aa7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 TRIM43Q96BQ3 446 aaPredicted RBP7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 GMCL1Q96IK5 515 aa7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 MAF1Q9H063 256 aa7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 MKNK2Q9HBH9 465 aa7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 FBXO28Q9NVF7 368 aa7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 MTMR4Q9NYA4 1195 aa7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 TBX21Q9UL17 535 aa7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 Q9Y3F1 56 aa7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 LRRC37A2A6NM11 1700 aa7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 LAMA2P24043 3122 aaKnown RBP7.29□□□□□ -1.24
LSM3P4-201ENST00000502948 SYNRGQ9UMZ2 1314 aa7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 CDH23Q9H251 3354 aa7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 SMIM22K7EJ46 135 aa7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 ERC2O15083 957 aa7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 CABYRO75952 493 aa7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 TIMP1P01033 207 aa7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 PGK2P07205 417 aa7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 SLC3A2P08195 630 aaKnown RBP7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 FGRP09769 529 aa7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 RAG1P15918 1043 aa7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 ITGB8P26012 769 aa7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 NT5C2P49902 561 aa7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 FPGSQ05932 587 aa7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 PDE4BQ07343 736 aa7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 FAAP100Q0VG06 881 aa7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 ACVR2BQ13705 512 aa7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 SLFNL1Q499Z3 407 aa7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 C9orf50Q5SZB4 431 aa7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 RASIP1Q5U651 963 aa7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 SNRNP48Q6IEG0 339 aaKnown RBP7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 RCSD1Q6JBY9 416 aa7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 MFSD5Q6N075 450 aa7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 CCDC129Q6ZRS4 1044 aa7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 SH3RF1Q7Z6J0 888 aa7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 FAM160B2Q86V87 743 aa7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 IFNL3Q8IZI9 196 aa7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 OSBP2Q969R2 916 aa7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 DDX11Q96FC9 970 aa7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 GLT1D1Q96MS3 346 aa7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 CDX2Q99626 313 aaPredicted RBP7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 NACAP1Q9BZK3 213 aa7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 KATNBL1Q9H079 304 aa7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 SPC25Q9HBM1 224 aa7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 STARD7Q9NQZ5 370 aa7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 PNMA2Q9UL42 364 aa7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 RIPK3Q9Y572 518 aa7.28□□□□□ -1.24
LSM3P4-201ENST00000502948 LCTP09848 1927 aa7.27□□□□□ -1.25
LSM3P4-201ENST00000502948 ASB14A6NK59 587 aa7.27□□□□□ -1.25
LSM3P4-201ENST00000502948 PGK1P00558 417 aa7.27□□□□□ -1.25
LSM3P4-201ENST00000502948 CHGBP05060 677 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms