RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 GBP4Q96PP9 640 aa5.34□□□□□ -1.56
MATR3-202ENST00000502422 OSBPL5Q9H0X9 879 aaPredicted RBP5.34□□□□□ -1.56
MATR3-202ENST00000502422 TMOD4Q9NZQ9 345 aa5.34□□□□□ -1.56
MATR3-202ENST00000502422 ABCF2Q9UG63 623 aa5.34□□□□□ -1.56
MATR3-202ENST00000502422 DENND2AQ9ULE3 1009 aa5.34□□□□□ -1.56
MATR3-202ENST00000502422 ATP11BQ9Y2G3 1177 aa5.34□□□□□ -1.56
MATR3-202ENST00000502422 MYH2Q9UKX2 1941 aa5.33□□□□□ -1.56
MATR3-202ENST00000502422 USP17L5A8MUK1 530 aa5.33□□□□□ -1.56
MATR3-202ENST00000502422 MSCO60682 206 aa5.33□□□□□ -1.56
MATR3-202ENST00000502422 SLURP2P0DP57 97 aa5.33□□□□□ -1.56
MATR3-202ENST00000502422 PTMSP20962 102 aa5.33□□□□□ -1.56
MATR3-202ENST00000502422 HMGN5P82970 282 aaKnown RBP5.33□□□□□ -1.56
MATR3-202ENST00000502422 MAP3K10Q02779 954 aa5.33□□□□□ -1.56
MATR3-202ENST00000502422 EXOSC9Q06265 439 aaKnown RBP5.33□□□□□ -1.56
MATR3-202ENST00000502422 CCDC27Q2M243 656 aa5.33□□□□□ -1.56
MATR3-202ENST00000502422 WDR78Q5VTH9 848 aa5.33□□□□□ -1.56
MATR3-202ENST00000502422 MFSD14CQ5VZR4 134 aa5.33□□□□□ -1.56
MATR3-202ENST00000502422 BANK1Q8NDB2 785 aa5.33□□□□□ -1.56
MATR3-202ENST00000502422 MORF4L1Q9UBU8 362 aa5.33□□□□□ -1.56
MATR3-202ENST00000502422 PHIPQ8WWQ0 1821 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 FAM196BA6NMK8 535 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 GLRX3O76003 335 aaKnown RBP5.32□□□□□ -1.56
MATR3-202ENST00000502422 FGFR2P21802 821 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 RTP1P59025 263 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 SMAD3P84022 425 aaKnown RBP5.32□□□□□ -1.56
MATR3-202ENST00000502422 LAPTM4AQ15012 233 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 TMEM259Q4ZIN3 620 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 SH3BP5LQ7L8J4 393 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 HSCBQ8IWL3 235 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 EDC3Q96F86 508 aaKnown RBP5.32□□□□□ -1.56
MATR3-202ENST00000502422 KAZALD1Q96I82 304 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 PAGR1Q9BTK6 254 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.32□□□□□ -1.56
MATR3-202ENST00000502422 IL16Q14005 1332 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 ATRNL1Q5VV63 1379 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 EYA2O00167 538 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 CAP2P40123 477 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 BTDP43251 543 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 HERVK_113P62684 666 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 ATP2B2Q01814 1243 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 MTMR2Q13614 643 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 CCL14Q16627 93 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 ZSCAN23Q3MJ62 389 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 RABL6Q3YEC7 729 aaPredicted RBP5.32□□□□□ -1.56
MATR3-202ENST00000502422 C9orf50Q5SZB4 431 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 SPTY2D1Q68D10 685 aaPredicted RBP5.32□□□□□ -1.56
MATR3-202ENST00000502422 GPR142Q7Z601 462 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 PLEKHH3Q7Z736 793 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 PANK1Q8TE04 598 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 PPM1EQ8WY54 764 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 LPAR1Q92633 364 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 BADQ92934 168 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 PRIMPOLQ96LW4 560 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 APBA2Q99767 749 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 TTYH1Q9H313 450 aaPredicted RBP5.32□□□□□ -1.56
MATR3-202ENST00000502422 DDX4Q9NQI0 724 aaKnown RBP5.32□□□□□ -1.56
MATR3-202ENST00000502422 CEP126Q9P2H0 1117 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 DDX20Q9UHI6 824 aaKnown RBP5.32□□□□□ -1.56
MATR3-202ENST00000502422 RAPGEFL1Q9UHV5 662 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 COG6Q9Y2V7 657 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 IVNS1ABPQ9Y6Y0 642 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 SALL1Q9NSC2 1324 aa5.32□□□□□ -1.56
MATR3-202ENST00000502422 PLXNB2O15031 1838 aa5.31□□□□□ -1.56
MATR3-202ENST00000502422 A6NJR5 290 aa5.31□□□□□ -1.56
MATR3-202ENST00000502422 C19orf81C9J6K1 198 aa5.31□□□□□ -1.56
MATR3-202ENST00000502422 KBTBD13C9JR72 458 aa5.31□□□□□ -1.56
MATR3-202ENST00000502422 DNM1LO00429 736 aa5.31□□□□□ -1.56
MATR3-202ENST00000502422 ASNSP08243 561 aa5.31□□□□□ -1.56
MATR3-202ENST00000502422 SLFN14P0C7P3 912 aa5.31□□□□□ -1.56
MATR3-202ENST00000502422 HOXA7P31268 230 aaPredicted RBP5.31□□□□□ -1.56
MATR3-202ENST00000502422 BACE1P56817 501 aa5.31□□□□□ -1.56
MATR3-202ENST00000502422 ERVK-9P63128 1117 aa5.31□□□□□ -1.56
MATR3-202ENST00000502422 ERVK-24P63145 666 aa5.31□□□□□ -1.56
MATR3-202ENST00000502422 CCNA1P78396 465 aa5.31□□□□□ -1.56
MATR3-202ENST00000502422 Q3C1V9 767 aa5.31□□□□□ -1.56
MATR3-202ENST00000502422 PUS10Q3MIT2 529 aaKnown RBP5.31□□□□□ -1.56
MATR3-202ENST00000502422 DNTTIP2Q5QJE6 756 aaKnown RBP5.31□□□□□ -1.56
MATR3-202ENST00000502422 ARRDC4Q8NCT1 418 aa5.31□□□□□ -1.56
MATR3-202ENST00000502422 GTF3C2Q8WUA4 911 aaPredicted RBP5.31□□□□□ -1.56
MATR3-202ENST00000502422 ANKRD7Q92527 254 aa5.31□□□□□ -1.56
MATR3-202ENST00000502422 GAS2L1Q99501 681 aaPredicted RBP5.31□□□□□ -1.56
MATR3-202ENST00000502422 KIF2CQ99661 725 aa5.31□□□□□ -1.56
MATR3-202ENST00000502422 TRIM34Q9BYJ4 488 aa5.31□□□□□ -1.56
MATR3-202ENST00000502422 CCDC39Q9UFE4 941 aa5.31□□□□□ -1.56
MATR3-202ENST00000502422 SOWAHBA6NEL2 793 aa5.31□□□□□ -1.56
MATR3-202ENST00000502422 USP17L10C9JJH3 530 aa5.31□□□□□ -1.56
MATR3-202ENST00000502422 TULP2O00295 520 aa5.31□□□□□ -1.56
MATR3-202ENST00000502422 PEX10O60683 326 aa5.31□□□□□ -1.56
MATR3-202ENST00000502422 AP1G2O75843 785 aa5.31□□□□□ -1.56
MATR3-202ENST00000502422 CD2BP2O95400 341 aaKnown RBP5.31□□□□□ -1.56
MATR3-202ENST00000502422 BAG4O95429 457 aaKnown RBP5.31□□□□□ -1.56
MATR3-202ENST00000502422 LDHCP07864 332 aa5.31□□□□□ -1.56
MATR3-202ENST00000502422 U2AF2P26368 475 aaKnown RBP eCLIP5.31□□□□□ -1.569e-7■■□□□ 14
MATR3-202ENST00000502422 GJC2Q5T442 439 aaPredicted RBP5.31□□□□□ -1.56
MATR3-202ENST00000502422 SLC39A5Q6ZMH5 540 aa5.31□□□□□ -1.56
MATR3-202ENST00000502422 RNPC3Q96LT9 517 aaKnown RBP5.31□□□□□ -1.56
MATR3-202ENST00000502422 NOL10Q9BSC4 688 aaKnown RBP5.31□□□□□ -1.56
MATR3-202ENST00000502422 SIL1Q9H173 461 aa5.31□□□□□ -1.56
MATR3-202ENST00000502422 PORCNQ9H237 461 aa5.31□□□□□ -1.56
MATR3-202ENST00000502422 TXNRD2Q9NNW7 524 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms