RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810		V9GY48	417 aa	Predicted RBP	12.72	□□□□□ -0.37
CDK11A-222	ENST00000498810	PLXNB2	O15031	1838 aa		12.72	□□□□□ -0.37
CDK11A-222	ENST00000498810	USP17L15	C9J2P7	530 aa		12.71	□□□□□ -0.37
CDK11A-222	ENST00000498810	USP17L13	C9JLJ4	530 aa		12.71	□□□□□ -0.37
CDK11A-222	ENST00000498810	USP17L11	C9JVI0	530 aa		12.71	□□□□□ -0.37
CDK11A-222	ENST00000498810	USP17L18	D6R9N7	530 aa		12.71	□□□□□ -0.37
CDK11A-222	ENST00000498810	USP17L22	D6RA61	530 aa		12.71	□□□□□ -0.37
CDK11A-222	ENST00000498810	USP17L17	D6RBQ6	530 aa		12.71	□□□□□ -0.37
CDK11A-222	ENST00000498810	USP17L19	D6RCP7	530 aa		12.71	□□□□□ -0.37
CDK11A-222	ENST00000498810	USP17L20	D6RJB6	530 aa		12.71	□□□□□ -0.37
CDK11A-222	ENST00000498810	NR1I2	O75469	434 aa		12.71	□□□□□ -0.37
CDK11A-222	ENST00000498810	AKR1B1	P15121	316 aa		12.71	□□□□□ -0.37
CDK11A-222	ENST00000498810	VCAM1	P19320	739 aa		12.71	□□□□□ -0.37
CDK11A-222	ENST00000498810	UBXN2A	P68543	259 aa		12.71	□□□□□ -0.37
CDK11A-222	ENST00000498810	CAP1	Q01518	475 aa		12.71	□□□□□ -0.37
CDK11A-222	ENST00000498810	USP17L24	Q0WX57	530 aa		12.71	□□□□□ -0.37
CDK11A-222	ENST00000498810	GIMAP6	Q6P9H5	292 aa		12.71	□□□□□ -0.37
CDK11A-222	ENST00000498810	CHD1L	Q86WJ1	897 aa		12.71	□□□□□ -0.37
CDK11A-222	ENST00000498810	SCUBE3	Q8IX30	993 aa		12.71	□□□□□ -0.37
CDK11A-222	ENST00000498810	RDH13	Q8NBN7	331 aa		12.71	□□□□□ -0.37
CDK11A-222	ENST00000498810	ACER1	Q8TDN7	264 aa		12.71	□□□□□ -0.37
CDK11A-222	ENST00000498810	KIAA1683	Q9H0B3	1180 aa		12.71	□□□□□ -0.37
CDK11A-222	ENST00000498810	RPAP3	Q9H6T3	665 aa	Predicted RBP	12.71	□□□□□ -0.37
CDK11A-222	ENST00000498810	COL11A1	P12107	1806 aa	Predicted RBP	12.7	□□□□□ -0.38
CDK11A-222	ENST00000498810	HOXA7	P31268	230 aa	Predicted RBP	12.7	□□□□□ -0.38
CDK11A-222	ENST00000498810	GRK4	P32298	578 aa		12.7	□□□□□ -0.38
CDK11A-222	ENST00000498810	GCGR	P47871	477 aa		12.7	□□□□□ -0.38
CDK11A-222	ENST00000498810	CCNA1	P78396	465 aa		12.7	□□□□□ -0.38
CDK11A-222	ENST00000498810	SMC5	Q8IY18	1101 aa		12.7	□□□□□ -0.38
CDK11A-222	ENST00000498810	GPRC5A	Q8NFJ5	357 aa		12.7	□□□□□ -0.38
CDK11A-222	ENST00000498810	ARMC5	Q96C12	935 aa		12.7	□□□□□ -0.38
CDK11A-222	ENST00000498810	C12orf42	Q96LP6	360 aa		12.7	□□□□□ -0.38
CDK11A-222	ENST00000498810	SEC62	Q99442	399 aa	Known RBP	12.7	□□□□□ -0.38
CDK11A-222	ENST00000498810	GOPC	Q9HD26	462 aa		12.7	□□□□□ -0.38
CDK11A-222	ENST00000498810	ISY1	Q9ULR0	285 aa	Known RBP	12.7	□□□□□ -0.38
CDK11A-222	ENST00000498810	GREB1L	Q9C091	1923 aa	Predicted RBP	12.7	□□□□□ -0.38
CDK11A-222	ENST00000498810	PARP14	Q460N5	1801 aa		12.69	□□□□□ -0.38
CDK11A-222	ENST00000498810	SALL3	Q9BXA9	1300 aa		12.69	□□□□□ -0.38
CDK11A-222	ENST00000498810	GSG1L2	A8MUP6	293 aa		12.69	□□□□□ -0.38
CDK11A-222	ENST00000498810	PATL2	C9JE40	543 aa	Known RBP	12.69	□□□□□ -0.38
CDK11A-222	ENST00000498810	CTGF	P29279	349 aa		12.69	□□□□□ -0.38
CDK11A-222	ENST00000498810	PDE4B	Q07343	736 aa		12.69	□□□□□ -0.38
CDK11A-222	ENST00000498810	PUS10	Q3MIT2	529 aa	Known RBP	12.69	□□□□□ -0.38
CDK11A-222	ENST00000498810	ZMYM1	Q5SVZ6	1142 aa		12.69	□□□□□ -0.38
CDK11A-222	ENST00000498810	CLEC10A	Q8IUN9	316 aa		12.69	□□□□□ -0.38
CDK11A-222	ENST00000498810	ZNF444	Q8N0Y2	327 aa	Predicted RBP	12.69	□□□□□ -0.38
CDK11A-222	ENST00000498810	ZNF333	Q96JL9	665 aa		12.69	□□□□□ -0.38
CDK11A-222	ENST00000498810	P2RX7	Q99572	595 aa	Known RBP	12.69	□□□□□ -0.38
CDK11A-222	ENST00000498810	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	12.69	□□□□□ -0.38
CDK11A-222	ENST00000498810	STAP2	Q9UGK3	403 aa		12.69	□□□□□ -0.38
CDK11A-222	ENST00000498810	KIAA0100	Q14667	2235 aa	Known RBP	12.69	□□□□□ -0.38
CDK11A-222	ENST00000498810	ROBO3	Q96MS0	1386 aa		12.69	□□□□□ -0.38
CDK11A-222	ENST00000498810		A0A0G2JMZ2	1700 aa		12.68	□□□□□ -0.38
CDK11A-222	ENST00000498810	RNF223	E7ERA6	249 aa		12.68	□□□□□ -0.38
CDK11A-222	ENST00000498810	ADCY3	O60266	1144 aa		12.68	□□□□□ -0.38
CDK11A-222	ENST00000498810	IGHD	P01880	384 aa		12.68	□□□□□ -0.38
CDK11A-222	ENST00000498810	FLT3LG	P49771	235 aa		12.68	□□□□□ -0.38
CDK11A-222	ENST00000498810	MFAP1	P55081	439 aa	Known RBP	12.68	□□□□□ -0.38
CDK11A-222	ENST00000498810	ERVK-9	P63128	1117 aa		12.68	□□□□□ -0.38
CDK11A-222	ENST00000498810	ERVK-24	P63145	666 aa		12.68	□□□□□ -0.38
CDK11A-222	ENST00000498810	NUCB1	Q02818	461 aa		12.68	□□□□□ -0.38
CDK11A-222	ENST00000498810	SBK1	Q52WX2	424 aa		12.68	□□□□□ -0.38
CDK11A-222	ENST00000498810	CCDC129	Q6ZRS4	1044 aa		12.68	□□□□□ -0.38
CDK11A-222	ENST00000498810	IFNL3	Q8IZI9	196 aa		12.68	□□□□□ -0.38
CDK11A-222	ENST00000498810	SPICE1	Q8N0Z3	855 aa		12.68	□□□□□ -0.38
CDK11A-222	ENST00000498810	LPAR1	Q92633	364 aa		12.68	□□□□□ -0.38
CDK11A-222	ENST00000498810	KANSL2	Q9H9L4	492 aa		12.68	□□□□□ -0.38
CDK11A-222	ENST00000498810	TOMM22	Q9NS69	142 aa		12.68	□□□□□ -0.38
CDK11A-222	ENST00000498810	DIAPH3	Q9NSV4	1193 aa		12.68	□□□□□ -0.38
CDK11A-222	ENST00000498810	GABRQ	Q9UN88	632 aa		12.68	□□□□□ -0.38
CDK11A-222	ENST00000498810	IVNS1ABP	Q9Y6Y0	642 aa		12.68	□□□□□ -0.38
CDK11A-222	ENST00000498810	LAMA4	Q16363	1823 aa		12.67	□□□□□ -0.38
CDK11A-222	ENST00000498810	PRDM1	O75626	825 aa		12.67	□□□□□ -0.38
CDK11A-222	ENST00000498810	FLOT1	O75955	427 aa		12.67	□□□□□ -0.38
CDK11A-222	ENST00000498810	ADH1B	P00325	375 aa		12.67	□□□□□ -0.38
CDK11A-222	ENST00000498810	TSPY3	P0CV98	308 aa		12.67	□□□□□ -0.38
CDK11A-222	ENST00000498810	TSPY8	P0CW00	308 aa		12.67	□□□□□ -0.38
CDK11A-222	ENST00000498810	MAPK4	P31152	587 aa		12.67	□□□□□ -0.38
CDK11A-222	ENST00000498810	GUCY1A2	P33402	732 aa		12.67	□□□□□ -0.38
CDK11A-222	ENST00000498810	RGS19	P49795	217 aa		12.67	□□□□□ -0.38
CDK11A-222	ENST00000498810	SOCS4	Q8WXH5	440 aa		12.67	□□□□□ -0.38
CDK11A-222	ENST00000498810	VCPKMT	Q9H867	229 aa		12.67	□□□□□ -0.38
CDK11A-222	ENST00000498810	HELLS	Q9NRZ9	838 aa		12.67	□□□□□ -0.38
CDK11A-222	ENST00000498810	MORF4L1	Q9UBU8	362 aa		12.67	□□□□□ -0.38
CDK11A-222	ENST00000498810	SMIM22	K7EJ46	135 aa		12.66	□□□□□ -0.38
CDK11A-222	ENST00000498810	WDR46	O15213	610 aa	Known RBP	12.66	□□□□□ -0.38
CDK11A-222	ENST00000498810	EEF2	P13639	858 aa	Known RBP	12.66	□□□□□ -0.38
CDK11A-222	ENST00000498810	ELN	P15502	786 aa		12.66	□□□□□ -0.38
CDK11A-222	ENST00000498810	PPARA	Q07869	468 aa		12.66	□□□□□ -0.38
CDK11A-222	ENST00000498810	FUT2	Q10981	343 aa		12.66	□□□□□ -0.38
CDK11A-222	ENST00000498810	PLS1	Q14651	629 aa		12.66	□□□□□ -0.38
CDK11A-222	ENST00000498810	MORN1	Q5T089	497 aa		12.66	□□□□□ -0.38
CDK11A-222	ENST00000498810	CATSPERG	Q6ZRH7	1159 aa		12.66	□□□□□ -0.38
CDK11A-222	ENST00000498810	NUDT12	Q9BQG2	462 aa		12.66	□□□□□ -0.38
CDK11A-222	ENST00000498810	RNF208	Q9H0X6	261 aa		12.66	□□□□□ -0.38
CDK11A-222	ENST00000498810	RABGAP1	Q9Y3P9	1069 aa		12.66	□□□□□ -0.38
CDK11A-222	ENST00000498810	CTDP1	Q9Y5B0	961 aa	Predicted RBP	12.66	□□□□□ -0.38
CDK11A-222	ENST00000498810	HTT	P42858	3142 aa		12.66	□□□□□ -0.38
CDK11A-222	ENST00000498810		A0A1W2PRG0	241 aa		12.65	□□□□□ -0.38
CDK11A-222	ENST00000498810	TSPY2	A6NKD2	308 aa		12.65	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms