RNA–Protein interactions for RNA: ENST00000498756.5

GPATCH4-210, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-210ENST00000498756 SAGE1Q9NXZ1 904 aa12.59□□□□□ -0.39
GPATCH4-210ENST00000498756 NID2Q14112 1375 aa12.58□□□□□ -0.4
GPATCH4-210ENST00000498756 K7ELQ4 463 aaPredicted RBP12.58□□□□□ -0.4
GPATCH4-210ENST00000498756 WDR46O15213 610 aaKnown RBP12.58□□□□□ -0.4
GPATCH4-210ENST00000498756 TBC1D8O95759 1140 aa12.58□□□□□ -0.4
GPATCH4-210ENST00000498756 CALM1P0DP23 149 aa12.58□□□□□ -0.4
GPATCH4-210ENST00000498756 CALM2P0DP24 149 aa12.58□□□□□ -0.4
GPATCH4-210ENST00000498756 CALM3P0DP25 149 aa12.58□□□□□ -0.4
GPATCH4-210ENST00000498756 CETPP11597 493 aa12.58□□□□□ -0.4
GPATCH4-210ENST00000498756 FDPSP14324 419 aaKnown RBP12.58□□□□□ -0.4
GPATCH4-210ENST00000498756 SREBF2Q12772 1141 aa12.58□□□□□ -0.4
GPATCH4-210ENST00000498756 CUL4AQ13619 759 aa12.58□□□□□ -0.4
GPATCH4-210ENST00000498756 SAMD1Q6SPF0 538 aaPredicted RBP12.58□□□□□ -0.4
GPATCH4-210ENST00000498756 BTNL9Q6UXG8 535 aa12.58□□□□□ -0.4
GPATCH4-210ENST00000498756 ADGRF4Q8IZF3 695 aa12.58□□□□□ -0.4
GPATCH4-210ENST00000498756 PROCA1Q8NCQ7 364 aaPredicted RBP12.58□□□□□ -0.4
GPATCH4-210ENST00000498756 CTCFLQ8NI51 663 aaPredicted RBP12.58□□□□□ -0.4
GPATCH4-210ENST00000498756 PIBF1Q8WXW3 757 aa12.58□□□□□ -0.4
GPATCH4-210ENST00000498756 LPAR1Q92633 364 aa12.58□□□□□ -0.4
GPATCH4-210ENST00000498756 PHKBQ93100 1093 aa12.58□□□□□ -0.4
GPATCH4-210ENST00000498756 JMJD4Q9H9V9 463 aa12.58□□□□□ -0.4
GPATCH4-210ENST00000498756 FOXD4L1Q9NU39 408 aa12.58□□□□□ -0.4
GPATCH4-210ENST00000498756 PRR12Q9ULL5 1215 aa12.58□□□□□ -0.4
GPATCH4-210ENST00000498756 ISY1Q9ULR0 285 aaKnown RBP12.58□□□□□ -0.4
GPATCH4-210ENST00000498756 AGTPBP1Q9UPW5 1226 aa12.58□□□□□ -0.4
GPATCH4-210ENST00000498756 PTPRFP10586 1907 aa12.58□□□□□ -0.4
GPATCH4-210ENST00000498756 USP17L15C9J2P7 530 aa12.57□□□□□ -0.4
GPATCH4-210ENST00000498756 USP17L13C9JLJ4 530 aa12.57□□□□□ -0.4
GPATCH4-210ENST00000498756 USP17L11C9JVI0 530 aa12.57□□□□□ -0.4
GPATCH4-210ENST00000498756 USP17L18D6R9N7 530 aa12.57□□□□□ -0.4
GPATCH4-210ENST00000498756 USP17L22D6RA61 530 aa12.57□□□□□ -0.4
GPATCH4-210ENST00000498756 USP17L17D6RBQ6 530 aa12.57□□□□□ -0.4
GPATCH4-210ENST00000498756 USP17L19D6RCP7 530 aa12.57□□□□□ -0.4
GPATCH4-210ENST00000498756 USP17L20D6RJB6 530 aa12.57□□□□□ -0.4
GPATCH4-210ENST00000498756 CYP2C8P10632 490 aa12.57□□□□□ -0.4
GPATCH4-210ENST00000498756 HOXA7P31268 230 aaPredicted RBP12.57□□□□□ -0.4
GPATCH4-210ENST00000498756 RCAN1P53805 252 aa12.57□□□□□ -0.4
GPATCH4-210ENST00000498756 INHBEP58166 350 aa12.57□□□□□ -0.4
GPATCH4-210ENST00000498756 USP17L24Q0WX57 530 aa12.57□□□□□ -0.4
GPATCH4-210ENST00000498756 ASPRV1Q53RT3 343 aa12.57□□□□□ -0.4
GPATCH4-210ENST00000498756 FASTKD5Q7L8L6 764 aaKnown RBP12.57□□□□□ -0.4
GPATCH4-210ENST00000498756 SPRYD3Q8NCJ5 442 aa12.57□□□□□ -0.4
GPATCH4-210ENST00000498756 NSUN7Q8NE18 718 aaKnown RBP12.57□□□□□ -0.4
GPATCH4-210ENST00000498756 KIFC2Q96AC6 838 aa12.57□□□□□ -0.4
GPATCH4-210ENST00000498756 SHISA4Q96DD7 197 aa12.57□□□□□ -0.4
GPATCH4-210ENST00000498756 ATG4CQ96DT6 458 aa12.57□□□□□ -0.4
GPATCH4-210ENST00000498756 PIGSQ96S52 555 aa12.57□□□□□ -0.4
GPATCH4-210ENST00000498756 TANGO6Q9C0B7 1094 aa12.57□□□□□ -0.4
GPATCH4-210ENST00000498756 ASCC2Q9H1I8 757 aaPredicted RBP12.57□□□□□ -0.4
GPATCH4-210ENST00000498756 R3HDMLQ9H3Y0 253 aa12.57□□□□□ -0.4
GPATCH4-210ENST00000498756 RIOX1Q9H6W3 641 aa12.57□□□□□ -0.4
GPATCH4-210ENST00000498756 V9GY48 417 aaPredicted RBP12.57□□□□□ -0.4
GPATCH4-210ENST00000498756 MANSC4A6NHS7 340 aaPredicted RBP12.56□□□□□ -0.4
GPATCH4-210ENST00000498756 PDHXO00330 501 aa12.56□□□□□ -0.4
GPATCH4-210ENST00000498756 PPP1R11O60927 126 aaPredicted RBP12.56□□□□□ -0.4
GPATCH4-210ENST00000498756 FLOT1O75955 427 aa12.56□□□□□ -0.4
GPATCH4-210ENST00000498756 IFNAR1P17181 557 aa12.56□□□□□ -0.4
GPATCH4-210ENST00000498756 DSG3P32926 999 aa12.56□□□□□ -0.4
GPATCH4-210ENST00000498756 MCM2P49736 904 aa12.56□□□□□ -0.4
GPATCH4-210ENST00000498756 PKN1Q16512 942 aa12.56□□□□□ -0.4
GPATCH4-210ENST00000498756 GPATCH4Q5T3I0 446 aaKnown RBP12.56□□□□□ -0.4
GPATCH4-210ENST00000498756 SYDE2Q5VT97 1194 aa12.56□□□□□ -0.4
GPATCH4-210ENST00000498756 ANKRD23Q86SG2 305 aa12.56□□□□□ -0.4
GPATCH4-210ENST00000498756 MTMR8Q96EF0 704 aa12.56□□□□□ -0.4
GPATCH4-210ENST00000498756 AIFM3Q96NN9 605 aa12.56□□□□□ -0.4
GPATCH4-210ENST00000498756 SH2B1Q9NRF2 756 aaPredicted RBP12.56□□□□□ -0.4
GPATCH4-210ENST00000498756 RBM28Q9NW13 759 aaKnown RBP12.56□□□□□ -0.4
GPATCH4-210ENST00000498756 FEM1BQ9UK73 627 aa12.56□□□□□ -0.4
GPATCH4-210ENST00000498756 ADAMTS5Q9UNA0 930 aa12.56□□□□□ -0.4
GPATCH4-210ENST00000498756 CNTNAP5Q8WYK1 1306 aa12.56□□□□□ -0.4
GPATCH4-210ENST00000498756 BAZ2BQ9UIF8 2168 aaKnown RBP12.56□□□□□ -0.4
GPATCH4-210ENST00000498756 RLFQ13129 1914 aa12.55□□□□□ -0.4
GPATCH4-210ENST00000498756 SPDYE16A6NNV3 312 aaPredicted RBP12.55□□□□□ -0.4
GPATCH4-210ENST00000498756 PLA2G6O60733 806 aa12.55□□□□□ -0.4
GPATCH4-210ENST00000498756 CNMDO75829 334 aa12.55□□□□□ -0.4
GPATCH4-210ENST00000498756 KIF5BP33176 963 aa12.55□□□□□ -0.4
GPATCH4-210ENST00000498756 STAT2P52630 851 aa12.55□□□□□ -0.4
GPATCH4-210ENST00000498756 COG2Q14746 738 aa12.55□□□□□ -0.4
GPATCH4-210ENST00000498756 IFNL1Q8IU54 200 aa12.55□□□□□ -0.4
GPATCH4-210ENST00000498756 HSCBQ8IWL3 235 aa12.55□□□□□ -0.4
GPATCH4-210ENST00000498756 IL27Q8NEV9 243 aa12.55□□□□□ -0.4
GPATCH4-210ENST00000498756 REPS2Q8NFH8 660 aa12.55□□□□□ -0.4
GPATCH4-210ENST00000498756 SMARCC2Q8TAQ2 1214 aa12.55□□□□□ -0.4
GPATCH4-210ENST00000498756 DDX11Q96FC9 970 aa12.55□□□□□ -0.4
GPATCH4-210ENST00000498756 SLF1Q9BQI6 1058 aa12.55□□□□□ -0.4
GPATCH4-210ENST00000498756 TXNRD2Q9NNW7 524 aa12.55□□□□□ -0.4
GPATCH4-210ENST00000498756 GJB4Q9NTQ9 266 aa12.55□□□□□ -0.4
GPATCH4-210ENST00000498756 BTBD7Q9P203 1132 aa12.55□□□□□ -0.4
GPATCH4-210ENST00000498756 RBPJLQ9UBG7 517 aa12.55□□□□□ -0.4
GPATCH4-210ENST00000498756 PPP1R9AQ9ULJ8 1098 aa12.55□□□□□ -0.4
GPATCH4-210ENST00000498756 LOC285556D6RIA3 1793 aa12.55□□□□□ -0.4
GPATCH4-210ENST00000498756 ZNF536O15090 1300 aa12.55□□□□□ -0.4
GPATCH4-210ENST00000498756 PTPDC1A2A3K4 754 aa12.54□□□□□ -0.4
GPATCH4-210ENST00000498756 ADAMTS3O15072 1205 aa12.54□□□□□ -0.4
GPATCH4-210ENST00000498756 GNAQP50148 359 aa12.54□□□□□ -0.4
GPATCH4-210ENST00000498756 IKQ13123 557 aaPredicted RBP12.54□□□□□ -0.4
GPATCH4-210ENST00000498756 QRICH1Q2TAL8 776 aa12.54□□□□□ -0.4
GPATCH4-210ENST00000498756 Q3C1V9 767 aa12.54□□□□□ -0.4
GPATCH4-210ENST00000498756 FAM160B2Q86V87 743 aa12.54□□□□□ -0.4
GPATCH4-210ENST00000498756 HOMER1Q86YM7 354 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms