RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 GAS2L1Q99501 681 aaPredicted RBP6.99□□□□□ -1.29
SPTA1-209ENST00000498708 CYLDQ9NQC7 956 aa6.99□□□□□ -1.29
SPTA1-209ENST00000498708 PRDM5Q9NQX1 630 aaPredicted RBP6.99□□□□□ -1.29
SPTA1-209ENST00000498708 ATP11BQ9Y2G3 1177 aa6.99□□□□□ -1.29
SPTA1-209ENST00000498708 ZHX2Q9Y6X8 837 aa6.99□□□□□ -1.29
SPTA1-209ENST00000498708 A0A1B0GUL6 1792 aa6.99□□□□□ -1.29
SPTA1-209ENST00000498708 RLFQ13129 1914 aa6.99□□□□□ -1.29
SPTA1-209ENST00000498708 TRIM43BA6NCK2 446 aa6.98□□□□□ -1.29
SPTA1-209ENST00000498708 F6X3S4 739 aa6.98□□□□□ -1.29
SPTA1-209ENST00000498708 SMIM22K7EJ46 135 aa6.98□□□□□ -1.29
SPTA1-209ENST00000498708 RNF225M0QZC1 329 aaPredicted RBP6.98□□□□□ -1.29
SPTA1-209ENST00000498708 ITGB8P26012 769 aa6.98□□□□□ -1.29
SPTA1-209ENST00000498708 RNF144AP50876 292 aaPredicted RBP6.98□□□□□ -1.29
SPTA1-209ENST00000498708 CASP7P55210 303 aa6.98□□□□□ -1.29
SPTA1-209ENST00000498708 CCL14Q16627 93 aa6.98□□□□□ -1.29
SPTA1-209ENST00000498708 NOL9Q5SY16 702 aaKnown RBP6.98□□□□□ -1.29
SPTA1-209ENST00000498708 TREML2Q5T2D2 321 aa6.98□□□□□ -1.29
SPTA1-209ENST00000498708 FASTKD5Q7L8L6 764 aaKnown RBP6.98□□□□□ -1.29
SPTA1-209ENST00000498708 ZNF804AQ7Z570 1209 aa6.98□□□□□ -1.29
SPTA1-209ENST00000498708 FAM83AQ86UY5 434 aa6.98□□□□□ -1.29
SPTA1-209ENST00000498708 WWC1Q8IX03 1113 aa6.98□□□□□ -1.29
SPTA1-209ENST00000498708 KDF1Q8NAX2 398 aaPredicted RBP6.98□□□□□ -1.29
SPTA1-209ENST00000498708 BANK1Q8NDB2 785 aa6.98□□□□□ -1.29
SPTA1-209ENST00000498708 TRIM43Q96BQ3 446 aaPredicted RBP6.98□□□□□ -1.29
SPTA1-209ENST00000498708 TIFAQ96CG3 184 aa6.98□□□□□ -1.29
SPTA1-209ENST00000498708 CHMP4AQ9BY43 222 aa6.98□□□□□ -1.29
SPTA1-209ENST00000498708 MYH16Q9H6N6 1097 aa6.98□□□□□ -1.29
SPTA1-209ENST00000498708 CXXC1Q9P0U4 656 aaPredicted RBP6.98□□□□□ -1.29
SPTA1-209ENST00000498708 SLC45A1Q9Y2W3 748 aa6.98□□□□□ -1.29
SPTA1-209ENST00000498708 DAGLAQ9Y4D2 1042 aa6.98□□□□□ -1.29
SPTA1-209ENST00000498708 AFG3L2Q9Y4W6 797 aa6.98□□□□□ -1.29
SPTA1-209ENST00000498708 PHIPQ8WWQ0 1821 aa6.98□□□□□ -1.29
SPTA1-209ENST00000498708 GRXCR1A8MXD5 290 aa6.97□□□□□ -1.29
SPTA1-209ENST00000498708 PEX10O60683 326 aa6.97□□□□□ -1.29
SPTA1-209ENST00000498708 CSF1RP07333 972 aa6.97□□□□□ -1.29
SPTA1-209ENST00000498708 SLURP2P0DP57 97 aa6.97□□□□□ -1.29
SPTA1-209ENST00000498708 IGFBP4P22692 258 aa6.97□□□□□ -1.29
SPTA1-209ENST00000498708 GPC1P35052 558 aa6.97□□□□□ -1.29
SPTA1-209ENST00000498708 EXOSC9Q06265 439 aaKnown RBP6.97□□□□□ -1.29
SPTA1-209ENST00000498708 KCNMA1Q12791 1236 aa6.97□□□□□ -1.29
SPTA1-209ENST00000498708 IFIT5Q13325 482 aaKnown RBP6.97□□□□□ -1.29
SPTA1-209ENST00000498708 FAM110CQ1W6H9 321 aa6.97□□□□□ -1.29
SPTA1-209ENST00000498708 TAF7LQ5H9L4 462 aa6.97□□□□□ -1.29
SPTA1-209ENST00000498708 EPHA10Q5JZY3 1008 aa6.97□□□□□ -1.29
SPTA1-209ENST00000498708 FOXD4L5Q5VV16 416 aaPredicted RBP6.97□□□□□ -1.29
SPTA1-209ENST00000498708 APOBEC3HQ6NTF7 200 aaKnown RBP6.97□□□□□ -1.29
SPTA1-209ENST00000498708 HOOK2Q96ED9 719 aa6.97□□□□□ -1.29
SPTA1-209ENST00000498708 PDLIM7Q9NR12 457 aa6.97□□□□□ -1.29
SPTA1-209ENST00000498708 MYO15AQ9UKN7 3530 aa6.96□□□□□ -1.29
SPTA1-209ENST00000498708 TRANK1O15050 2925 aa6.96□□□□□ -1.3
SPTA1-209ENST00000498708 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.96□□□□□ -1.3
SPTA1-209ENST00000498708 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.96□□□□□ -1.3
SPTA1-209ENST00000498708 FOXO4P98177 505 aa6.96□□□□□ -1.3
SPTA1-209ENST00000498708 TCP10Q12799 353 aa6.96□□□□□ -1.3
SPTA1-209ENST00000498708 NR1H3Q13133 447 aa6.96□□□□□ -1.3
SPTA1-209ENST00000498708 RNFT1Q5M7Z0 435 aa6.96□□□□□ -1.3
SPTA1-209ENST00000498708 SLC4A10Q6U841 1118 aa6.96□□□□□ -1.3
SPTA1-209ENST00000498708 LMBR1LQ6UX01 489 aa6.96□□□□□ -1.3
SPTA1-209ENST00000498708 SLC39A5Q6ZMH5 540 aa6.96□□□□□ -1.3
SPTA1-209ENST00000498708 CCDC84Q86UT8 332 aaPredicted RBP6.96□□□□□ -1.3
SPTA1-209ENST00000498708 LINS1Q8NG48 757 aa6.96□□□□□ -1.3
SPTA1-209ENST00000498708 TDRD7Q8NHU6 1098 aaKnown RBP6.96□□□□□ -1.3
SPTA1-209ENST00000498708 GMCL1Q96IK5 515 aa6.96□□□□□ -1.3
SPTA1-209ENST00000498708 PLA2G12BQ9BX93 195 aa6.96□□□□□ -1.3
SPTA1-209ENST00000498708 CNNM1Q9NRU3 951 aa6.96□□□□□ -1.3
SPTA1-209ENST00000498708 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.96□□□□□ -1.3
SPTA1-209ENST00000498708 IQSEC3Q9UPP2 1182 aaPredicted RBP6.96□□□□□ -1.3
SPTA1-209ENST00000498708 C5orf42Q9H799 3197 aa6.96□□□□□ -1.3
SPTA1-209ENST00000498708 FANCIQ9NVI1 1328 aa6.96□□□□□ -1.3
SPTA1-209ENST00000498708 SPTBN4Q9H254 2564 aa6.95□□□□□ -1.3
SPTA1-209ENST00000498708 TRIM75PA6NK02 468 aa6.95□□□□□ -1.3
SPTA1-209ENST00000498708 PHF20L1A8MW92 1017 aa6.95□□□□□ -1.3
SPTA1-209ENST00000498708 PI4K2BG5E9Z4 385 aa6.95□□□□□ -1.3
SPTA1-209ENST00000498708 VAMP4O75379 141 aa6.95□□□□□ -1.3
SPTA1-209ENST00000498708 PTPRAP18433 802 aa6.95□□□□□ -1.3
SPTA1-209ENST00000498708 GYG1P46976 350 aa6.95□□□□□ -1.3
SPTA1-209ENST00000498708 ERVK-9P63128 1117 aa6.95□□□□□ -1.3
SPTA1-209ENST00000498708 CHAF1AQ13111 956 aaPredicted RBP6.95□□□□□ -1.3
SPTA1-209ENST00000498708 CCDC57Q2TAC2 916 aa6.95□□□□□ -1.3
SPTA1-209ENST00000498708 TRIM60Q495X7 471 aa6.95□□□□□ -1.3
SPTA1-209ENST00000498708 FKBP1CQ5VVH2 108 aa6.95□□□□□ -1.3
SPTA1-209ENST00000498708 LDHAL6AQ6ZMR3 332 aa6.95□□□□□ -1.3
SPTA1-209ENST00000498708 PRICKLE2Q7Z3G6 844 aa6.95□□□□□ -1.3
SPTA1-209ENST00000498708 ZFPM1Q8IX07 1006 aa6.95□□□□□ -1.3
SPTA1-209ENST00000498708 SVOPQ8N4V2 548 aa6.95□□□□□ -1.3
SPTA1-209ENST00000498708 FAM151AQ8WW52 585 aa6.95□□□□□ -1.3
SPTA1-209ENST00000498708 FBXL18Q96ME1 805 aa6.95□□□□□ -1.3
SPTA1-209ENST00000498708 ZDHHC15Q96MV8 337 aa6.95□□□□□ -1.3
SPTA1-209ENST00000498708 PBX4Q9BYU1 374 aa6.95□□□□□ -1.3
SPTA1-209ENST00000498708 PUS3Q9BZE2 481 aaKnown RBP6.95□□□□□ -1.3
SPTA1-209ENST00000498708 MRS2Q9HD23 443 aa6.95□□□□□ -1.3
SPTA1-209ENST00000498708 CD320Q9NPF0 282 aa6.95□□□□□ -1.3
SPTA1-209ENST00000498708 AGTPBP1Q9UPW5 1226 aa6.95□□□□□ -1.3
SPTA1-209ENST00000498708 LRRC37A2A6NM11 1700 aa6.95□□□□□ -1.3
SPTA1-209ENST00000498708 ZFHX4Q86UP3 3567 aa6.95□□□□□ -1.3
SPTA1-209ENST00000498708 ZDBF2Q9HCK1 2354 aa6.95□□□□□ -1.3
SPTA1-209ENST00000498708 RPAP1Q9BWH6 1393 aaPredicted RBP6.95□□□□□ -1.3
SPTA1-209ENST00000498708 GBF1Q92538 1859 aa6.94□□□□□ -1.3
SPTA1-209ENST00000498708 MEN1O00255 615 aa6.94□□□□□ -1.3
SPTA1-209ENST00000498708 DNM1LO00429 736 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms