RNA–Protein interactions for RNA: ENST00000498698.1

HMGCL-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-207ENST00000498698 PPP4R3BQ5MIZ7 849 aa11.23□□□□□ -0.61
HMGCL-207ENST00000498698 PRAMEF19Q5SWL8 479 aa11.23□□□□□ -0.61
HMGCL-207ENST00000498698 CHRDL2Q6WN34 429 aa11.23□□□□□ -0.61
HMGCL-207ENST00000498698 KIFC2Q96AC6 838 aa11.23□□□□□ -0.61
HMGCL-207ENST00000498698 GMCL1Q96IK5 515 aa11.23□□□□□ -0.61
HMGCL-207ENST00000498698 SLC38A10Q9HBR0 1119 aa11.23□□□□□ -0.61
HMGCL-207ENST00000498698 DIS3Q9Y2L1 958 aaKnown RBP11.23□□□□□ -0.61
HMGCL-207ENST00000498698 RIPK3Q9Y572 518 aa11.23□□□□□ -0.61
HMGCL-207ENST00000498698 RANBP6O60518 1105 aaKnown RBP11.22□□□□□ -0.61
HMGCL-207ENST00000498698 ZMYM6O95789 1325 aa11.22□□□□□ -0.61
HMGCL-207ENST00000498698 FXR1P51114 621 aaKnown RBP eCLIP11.22□□□□□ -0.61
HMGCL-207ENST00000498698 SNRNP48Q6IEG0 339 aaKnown RBP11.22□□□□□ -0.61
HMGCL-207ENST00000498698 CCDC171Q6TFL3 1326 aa11.22□□□□□ -0.61
HMGCL-207ENST00000498698 RAVER2Q9HCJ3 691 aaKnown RBP11.22□□□□□ -0.61
HMGCL-207ENST00000498698 RBM27Q9P2N5 1060 aaKnown RBP11.22□□□□□ -0.61
HMGCL-207ENST00000498698 STX8Q9UNK0 236 aa11.22□□□□□ -0.61
HMGCL-207ENST00000498698 RLFQ13129 1914 aa11.21□□□□□ -0.61
HMGCL-207ENST00000498698 DNAJC25-GNG10A0A024R161 153 aa11.21□□□□□ -0.61
HMGCL-207ENST00000498698 TMEM232C9JQI7 657 aa11.21□□□□□ -0.61
HMGCL-207ENST00000498698 SEPT4O43236 478 aa11.21□□□□□ -0.61
HMGCL-207ENST00000498698 MCCP23508 829 aa11.21□□□□□ -0.61
HMGCL-207ENST00000498698 SLC1A4P43007 532 aa11.21□□□□□ -0.61
HMGCL-207ENST00000498698 OAZ1P54368 228 aa11.21□□□□□ -0.61
HMGCL-207ENST00000498698 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.21□□□□□ -0.61
HMGCL-207ENST00000498698 FAM160B2Q86V87 743 aa11.21□□□□□ -0.61
HMGCL-207ENST00000498698 C7orf61Q8IZ16 206 aa11.21□□□□□ -0.61
HMGCL-207ENST00000498698 CPXCR1Q8N123 301 aa11.21□□□□□ -0.61
HMGCL-207ENST00000498698 STAG1Q8WVM7 1258 aa11.21□□□□□ -0.61
HMGCL-207ENST00000498698 TINF2Q9BSI4 451 aa11.21□□□□□ -0.61
HMGCL-207ENST00000498698 NRBP1Q9UHY1 535 aa11.21□□□□□ -0.61
HMGCL-207ENST00000498698 MYH7P12883 1935 aa11.2□□□□□ -0.62
HMGCL-207ENST00000498698 GREB1LQ9C091 1923 aaPredicted RBP11.2□□□□□ -0.62
HMGCL-207ENST00000498698 DNM1LO00429 736 aa11.2□□□□□ -0.62
HMGCL-207ENST00000498698 PLA2G6O60733 806 aa11.2□□□□□ -0.62
HMGCL-207ENST00000498698 FDX1P10109 184 aa11.2□□□□□ -0.62
HMGCL-207ENST00000498698 PDE4AP27815 886 aa11.2□□□□□ -0.62
HMGCL-207ENST00000498698 STAT2P52630 851 aa11.2□□□□□ -0.62
HMGCL-207ENST00000498698 MFAP1P55081 439 aaKnown RBP11.2□□□□□ -0.62
HMGCL-207ENST00000498698 HAND2P61296 217 aa11.2□□□□□ -0.62
HMGCL-207ENST00000498698 LRRC26Q2I0M4 334 aa11.2□□□□□ -0.62
HMGCL-207ENST00000498698 RCSD1Q6JBY9 416 aa11.2□□□□□ -0.62
HMGCL-207ENST00000498698 ARRDC4Q8NCT1 418 aa11.2□□□□□ -0.62
HMGCL-207ENST00000498698 CHURC1Q8WUH1 139 aa11.2□□□□□ -0.62
HMGCL-207ENST00000498698 TCP11L1Q9NUJ3 509 aa11.2□□□□□ -0.62
HMGCL-207ENST00000498698 CTDP1Q9Y5B0 961 aaPredicted RBP11.2□□□□□ -0.62
HMGCL-207ENST00000498698 A0A0G2JMZ2 1700 aa11.2□□□□□ -0.62
HMGCL-207ENST00000498698 TRIOBPQ9H2D6 2365 aa11.19□□□□□ -0.62
HMGCL-207ENST00000498698 ZNF536O15090 1300 aa11.19□□□□□ -0.62
HMGCL-207ENST00000498698 ZNF865P0CJ78 1059 aaPredicted RBP11.19□□□□□ -0.62
HMGCL-207ENST00000498698 PCP11498 1178 aaKnown RBP11.19□□□□□ -0.62
HMGCL-207ENST00000498698 TAL1P17542 331 aaPredicted RBP11.19□□□□□ -0.62
HMGCL-207ENST00000498698 SLC4A3P48751 1232 aa11.19□□□□□ -0.62
HMGCL-207ENST00000498698 IRX6P78412 446 aaPredicted RBP11.19□□□□□ -0.62
HMGCL-207ENST00000498698 RRP12Q5JTH9 1297 aaKnown RBP11.19□□□□□ -0.62
HMGCL-207ENST00000498698 AKNAD1Q5T1N1 836 aa11.19□□□□□ -0.62
HMGCL-207ENST00000498698 GJC2Q5T442 439 aaPredicted RBP11.19□□□□□ -0.62
HMGCL-207ENST00000498698 ANO1Q5XXA6 986 aa11.19□□□□□ -0.62
HMGCL-207ENST00000498698 CWC27Q6UX04 472 aaKnown RBP11.19□□□□□ -0.62
HMGCL-207ENST00000498698 MAMDC4Q6UXC1 1216 aa11.19□□□□□ -0.62
HMGCL-207ENST00000498698 KCTD1Q719H9 257 aa11.19□□□□□ -0.62
HMGCL-207ENST00000498698 RASGRP2Q7LDG7 609 aa11.19□□□□□ -0.62
HMGCL-207ENST00000498698 TBC1D10CQ8IV04 446 aa11.19□□□□□ -0.62
HMGCL-207ENST00000498698 MSL3Q8N5Y2 521 aaKnown RBP11.19□□□□□ -0.62
HMGCL-207ENST00000498698 CHST13Q8NET6 341 aa11.19□□□□□ -0.62
HMGCL-207ENST00000498698 CHMP4CQ96CF2 233 aa11.19□□□□□ -0.62
HMGCL-207ENST00000498698 DDX11Q96FC9 970 aa11.19□□□□□ -0.62
HMGCL-207ENST00000498698 GDF15Q99988 308 aa11.19□□□□□ -0.62
HMGCL-207ENST00000498698 TMEM47Q9BQJ4 181 aa11.19□□□□□ -0.62
HMGCL-207ENST00000498698 SENP6Q9GZR1 1112 aaPredicted RBP11.19□□□□□ -0.62
HMGCL-207ENST00000498698 TOMM22Q9NS69 142 aa11.19□□□□□ -0.62
HMGCL-207ENST00000498698 DIAPH3Q9NSV4 1193 aa11.19□□□□□ -0.62
HMGCL-207ENST00000498698 FBXO40Q9UH90 709 aa11.19□□□□□ -0.62
HMGCL-207ENST00000498698 ZMYND8Q9ULU4 1186 aaPredicted RBP11.19□□□□□ -0.62
HMGCL-207ENST00000498698 HIP1O00291 1037 aa11.18□□□□□ -0.62
HMGCL-207ENST00000498698 SNAI1O95863 264 aaPredicted RBP11.18□□□□□ -0.62
HMGCL-207ENST00000498698 TOP1P11387 765 aaKnown RBP11.18□□□□□ -0.62
HMGCL-207ENST00000498698 SYN1P17600 705 aa11.18□□□□□ -0.62
HMGCL-207ENST00000498698 IKQ13123 557 aaPredicted RBP11.18□□□□□ -0.62
HMGCL-207ENST00000498698 MFSD6Q6ZSS7 791 aa11.18□□□□□ -0.62
HMGCL-207ENST00000498698 ZNF467Q7Z7K2 595 aaPredicted RBP11.18□□□□□ -0.62
HMGCL-207ENST00000498698 DCAF4Q8WV16 495 aa11.18□□□□□ -0.62
HMGCL-207ENST00000498698 FGD4Q96M96 766 aa11.18□□□□□ -0.62
HMGCL-207ENST00000498698 AGBL1Q96MI9 1066 aa11.18□□□□□ -0.62
HMGCL-207ENST00000498698 PRR12Q9ULL5 1215 aa11.18□□□□□ -0.62
HMGCL-207ENST00000498698 ISY1Q9ULR0 285 aaKnown RBP11.18□□□□□ -0.62
HMGCL-207ENST00000498698 ZNF236Q9UL36 1845 aa11.18□□□□□ -0.62
HMGCL-207ENST00000498698 SYNGAP1Q96PV0 1343 aa11.17□□□□□ -0.62
HMGCL-207ENST00000498698 A0A1W2PPC1 479 aa11.17□□□□□ -0.62
HMGCL-207ENST00000498698 ZNF213O14771 459 aa11.17□□□□□ -0.62
HMGCL-207ENST00000498698 GSPT1P15170 499 aaKnown RBP11.17□□□□□ -0.62
HMGCL-207ENST00000498698 BMP8BP34820 402 aa11.17□□□□□ -0.62
HMGCL-207ENST00000498698 SNAP25P60880 206 aa11.17□□□□□ -0.62
HMGCL-207ENST00000498698 LRRC41Q15345 812 aa11.17□□□□□ -0.62
HMGCL-207ENST00000498698 TTBK2Q6IQ55 1244 aa11.17□□□□□ -0.62
HMGCL-207ENST00000498698 BTNL9Q6UXG8 535 aa11.17□□□□□ -0.62
HMGCL-207ENST00000498698 ANKRD35Q8N283 1001 aa11.17□□□□□ -0.62
HMGCL-207ENST00000498698 TTC14Q96N46 770 aa11.17□□□□□ -0.62
HMGCL-207ENST00000498698 DSCC1Q9BVC3 393 aa11.17□□□□□ -0.62
HMGCL-207ENST00000498698 RNF41Q9H4P4 317 aaPredicted RBP11.17□□□□□ -0.62
HMGCL-207ENST00000498698 HOMER2Q9NSB8 354 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms