RNA–Protein interactions for RNA: ENST00000498603.5

SEC61B-203, Transcript of Sec61 translocon beta subunit, humanhuman

TSL 3 BASIC

Gene SEC61B, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-203ENST00000498603 RBM27Q9P2N5 1060 aaKnown RBP16.29■□□□□ 0.2
SEC61B-203ENST00000498603 SMC3Q9UQE7 1217 aa16.29■□□□□ 0.2
SEC61B-203ENST00000498603 FAM155AB1AL88 458 aaPredicted RBP16.28■□□□□ 0.2
SEC61B-203ENST00000498603 DTNBO60941 627 aa16.28■□□□□ 0.2
SEC61B-203ENST00000498603 HSP90AA1P07900 732 aaKnown RBP16.28■□□□□ 0.2
SEC61B-203ENST00000498603 GJB2P29033 226 aa16.28■□□□□ 0.2
SEC61B-203ENST00000498603 DDIT3P35638 169 aa16.28■□□□□ 0.2
SEC61B-203ENST00000498603 SLC16A2P36021 539 aa16.28■□□□□ 0.2
SEC61B-203ENST00000498603 PKN1Q16512 942 aa16.28■□□□□ 0.2
SEC61B-203ENST00000498603 GPAT2Q6NUI2 795 aa16.28■□□□□ 0.2
SEC61B-203ENST00000498603 PRPF38AQ8NAV1 312 aaKnown RBP16.28■□□□□ 0.2
SEC61B-203ENST00000498603 CCDC102AQ96A19 550 aa16.28■□□□□ 0.2
SEC61B-203ENST00000498603 SLC26A6Q9BXS9 759 aa16.28■□□□□ 0.2
SEC61B-203ENST00000498603 ORC3Q9UBD5 711 aaPredicted RBP16.28■□□□□ 0.2
SEC61B-203ENST00000498603 PRR12Q9ULL5 1215 aa16.28■□□□□ 0.2
SEC61B-203ENST00000498603 ADAMTS5Q9UNA0 930 aa16.28■□□□□ 0.2
SEC61B-203ENST00000498603 AGTPBP1Q9UPW5 1226 aa16.28■□□□□ 0.2
SEC61B-203ENST00000498603 V9GY48 417 aaPredicted RBP16.28■□□□□ 0.2
SEC61B-203ENST00000498603 MYPNQ86TC9 1320 aa16.27■□□□□ 0.2
SEC61B-203ENST00000498603 RASSF10A6NK89 507 aa16.27■□□□□ 0.2
SEC61B-203ENST00000498603 USP17L15C9J2P7 530 aa16.27■□□□□ 0.2
SEC61B-203ENST00000498603 USP17L13C9JLJ4 530 aa16.27■□□□□ 0.2
SEC61B-203ENST00000498603 USP17L11C9JVI0 530 aa16.27■□□□□ 0.2
SEC61B-203ENST00000498603 USP17L18D6R9N7 530 aa16.27■□□□□ 0.2
SEC61B-203ENST00000498603 USP17L22D6RA61 530 aa16.27■□□□□ 0.2
SEC61B-203ENST00000498603 USP17L17D6RBQ6 530 aa16.27■□□□□ 0.2
SEC61B-203ENST00000498603 USP17L19D6RCP7 530 aa16.27■□□□□ 0.2
SEC61B-203ENST00000498603 USP17L20D6RJB6 530 aa16.27■□□□□ 0.2
SEC61B-203ENST00000498603 DEXIO95424 95 aa16.27■□□□□ 0.2
SEC61B-203ENST00000498603 CETPP11597 493 aa16.27■□□□□ 0.2
SEC61B-203ENST00000498603 USP17L24Q0WX57 530 aa16.27■□□□□ 0.2
SEC61B-203ENST00000498603 TREML2Q5T2D2 321 aa16.27■□□□□ 0.2
SEC61B-203ENST00000498603 SYDE2Q5VT97 1194 aa16.27■□□□□ 0.2
SEC61B-203ENST00000498603 TRIM22Q8IYM9 498 aa16.27■□□□□ 0.2
SEC61B-203ENST00000498603 RGS22Q8NE09 1264 aa16.27■□□□□ 0.2
SEC61B-203ENST00000498603 FOXD4L1Q9NU39 408 aa16.27■□□□□ 0.2
SEC61B-203ENST00000498603 FBXO28Q9NVF7 368 aa16.27■□□□□ 0.2
SEC61B-203ENST00000498603 DAXXQ9UER7 740 aaPredicted RBP16.27■□□□□ 0.2
SEC61B-203ENST00000498603 PPP1R9AQ9ULJ8 1098 aa16.27■□□□□ 0.2
SEC61B-203ENST00000498603 ABT1Q9ULW3 272 aaKnown RBP16.27■□□□□ 0.2
SEC61B-203ENST00000498603 PPFIA3O75145 1194 aa16.26■□□□□ 0.19
SEC61B-203ENST00000498603 FDX1P10109 184 aa16.26■□□□□ 0.19
SEC61B-203ENST00000498603 COG2Q14746 738 aa16.26■□□□□ 0.19
SEC61B-203ENST00000498603 PFKFB3Q16875 520 aaPredicted RBP16.26■□□□□ 0.19
SEC61B-203ENST00000498603 GADL1Q6ZQY3 521 aa16.26■□□□□ 0.19
SEC61B-203ENST00000498603 SPRYD3Q8NCJ5 442 aa16.26■□□□□ 0.19
SEC61B-203ENST00000498603 DDX11Q96FC9 970 aa16.26■□□□□ 0.19
SEC61B-203ENST00000498603 PIGSQ96S52 555 aa16.26■□□□□ 0.19
SEC61B-203ENST00000498603 SLF1Q9BQI6 1058 aa16.26■□□□□ 0.19
SEC61B-203ENST00000498603 RANBP17Q9H2T7 1088 aaKnown RBP16.26■□□□□ 0.19
SEC61B-203ENST00000498603 SLC45A1Q9Y2W3 748 aa16.26■□□□□ 0.19
SEC61B-203ENST00000498603 A0A0G2JMZ2 1700 aa16.25■□□□□ 0.19
SEC61B-203ENST00000498603 CCL15-CCL14A0A0B4J2E2 113 aa16.25■□□□□ 0.19
SEC61B-203ENST00000498603 PNMA6FA0A0J9YX94 578 aa16.25■□□□□ 0.19
SEC61B-203ENST00000498603 MANSC4A6NHS7 340 aaPredicted RBP16.25■□□□□ 0.19
SEC61B-203ENST00000498603 DSG3P32926 999 aa16.25■□□□□ 0.19
SEC61B-203ENST00000498603 CCL15Q16663 113 aa16.25■□□□□ 0.19
SEC61B-203ENST00000498603 LBX2Q6XYB7 198 aa16.25■□□□□ 0.19
SEC61B-203ENST00000498603 BRI3BPQ8WY22 251 aa16.25■□□□□ 0.19
SEC61B-203ENST00000498603 RRP36Q96EU6 259 aaKnown RBP16.25■□□□□ 0.19
SEC61B-203ENST00000498603 TANGO6Q9C0B7 1094 aa16.25■□□□□ 0.19
SEC61B-203ENST00000498603 VAT1LQ9HCJ6 419 aa16.25■□□□□ 0.19
SEC61B-203ENST00000498603 COL11A1P12107 1806 aaPredicted RBP16.24■□□□□ 0.19
SEC61B-203ENST00000498603 hCG_1642624A0A1W2PR95 340 aa16.24■□□□□ 0.19
SEC61B-203ENST00000498603 ZBTB5O15062 677 aa16.24■□□□□ 0.19
SEC61B-203ENST00000498603 FLOT1O75955 427 aa16.24■□□□□ 0.19
SEC61B-203ENST00000498603 SCG2P13521 617 aa16.24■□□□□ 0.19
SEC61B-203ENST00000498603 INHBEP58166 350 aa16.24■□□□□ 0.19
SEC61B-203ENST00000498603 AKAP17AQ02040 695 aaKnown RBP16.24■□□□□ 0.19
SEC61B-203ENST00000498603 IKQ13123 557 aaPredicted RBP16.24■□□□□ 0.19
SEC61B-203ENST00000498603 PABPC4Q13310 644 aaKnown RBP eCLIP16.24■□□□□ 0.194e-6■■□□□ 12.6
SEC61B-203ENST00000498603 ANKRD23Q86SG2 305 aa16.24■□□□□ 0.19
SEC61B-203ENST00000498603 FAM177A1Q8N128 213 aaPredicted RBP16.24■□□□□ 0.19
SEC61B-203ENST00000498603 WASF1Q92558 559 aa16.24■□□□□ 0.19
SEC61B-203ENST00000498603 KIFC2Q96AC6 838 aa16.24■□□□□ 0.19
SEC61B-203ENST00000498603 PTPN18Q99952 460 aa16.24■□□□□ 0.19
SEC61B-203ENST00000498603 SLC38A10Q9HBR0 1119 aa16.24■□□□□ 0.19
SEC61B-203ENST00000498603 HOXC10Q9NYD6 342 aa16.24■□□□□ 0.19
SEC61B-203ENST00000498603 ISY1Q9ULR0 285 aaKnown RBP16.24■□□□□ 0.19
SEC61B-203ENST00000498603 KIF3AQ9Y496 699 aa16.24■□□□□ 0.19
SEC61B-203ENST00000498603 BTBD19C9JJ37 291 aa16.23■□□□□ 0.19
SEC61B-203ENST00000498603 hCG_1984214I3L0E3 225 aa16.23■□□□□ 0.19
SEC61B-203ENST00000498603 PPP1R11O60927 126 aaPredicted RBP16.23■□□□□ 0.19
SEC61B-203ENST00000498603 PDIA4P13667 645 aaKnown RBP16.23■□□□□ 0.19
SEC61B-203ENST00000498603 MKRN3Q13064 507 aaKnown RBP16.23■□□□□ 0.19
SEC61B-203ENST00000498603 CDC37Q16543 378 aaPredicted RBP16.23■□□□□ 0.19
SEC61B-203ENST00000498603 QRICH1Q2TAL8 776 aa16.23■□□□□ 0.19
SEC61B-203ENST00000498603 DEFB115Q30KQ5 88 aa16.23■□□□□ 0.19
SEC61B-203ENST00000498603 POTEEQ6S8J3 1075 aa16.23■□□□□ 0.19
SEC61B-203ENST00000498603 ZNF713Q8N859 430 aaPredicted RBP16.23■□□□□ 0.19
SEC61B-203ENST00000498603 FAM184AQ8NB25 1140 aa16.23■□□□□ 0.19
SEC61B-203ENST00000498603 REPS2Q8NFH8 660 aa16.23■□□□□ 0.19
SEC61B-203ENST00000498603 SHISA4Q96DD7 197 aa16.23■□□□□ 0.19
SEC61B-203ENST00000498603 AIFM3Q96NN9 605 aa16.23■□□□□ 0.19
SEC61B-203ENST00000498603 ALG1Q9BT22 464 aa16.23■□□□□ 0.19
SEC61B-203ENST00000498603 ASCC2Q9H1I8 757 aaPredicted RBP16.23■□□□□ 0.19
SEC61B-203ENST00000498603 ZCCHC17Q9NP64 241 aaKnown RBP16.23■□□□□ 0.19
SEC61B-203ENST00000498603 ZNF536O15090 1300 aa16.22■□□□□ 0.19
SEC61B-203ENST00000498603 SPDYE16A6NNV3 312 aaPredicted RBP16.22■□□□□ 0.19
SEC61B-203ENST00000498603 VWA5AO00534 786 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms