RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 TTC38Q5R3I4 469 aa16.6■□□□□ 0.25
C4A-259ENST00000498271 FBXO18Q8NFZ0 1043 aa16.6■□□□□ 0.25
C4A-259ENST00000498271 VCX3AQ9NNX9 186 aa16.6■□□□□ 0.25
C4A-259ENST00000498271 PABPN1LA6NDY0 278 aaKnown RBP16.6■□□□□ 0.25
C4A-259ENST00000498271 HSP90AA5PQ58FG0 334 aa16.6■□□□□ 0.25
C4A-259ENST00000498271 GBP7Q8N8V2 638 aaPredicted RBP16.6■□□□□ 0.25
C4A-259ENST00000498271 TEX11Q8IYF3 940 aa16.6■□□□□ 0.25
C4A-259ENST00000498271 CCNL1Q9UK58 526 aaPredicted RBP16.6■□□□□ 0.25
C4A-259ENST00000498271 STK38LQ9Y2H1 464 aa16.6■□□□□ 0.25
C4A-259ENST00000498271 LMTK2Q8IWU2 1503 aa16.6■□□□□ 0.25
C4A-259ENST00000498271 CCDC169A6NNP5 214 aa16.6■□□□□ 0.25
C4A-259ENST00000498271 CYP21A2P08686 494 aa16.6■□□□□ 0.25
C4A-259ENST00000498271 DNM2P50570 870 aa16.6■□□□□ 0.25
C4A-259ENST00000498271 CLCN6P51797 869 aa16.6■□□□□ 0.25
C4A-259ENST00000498271 EPHB4P54760 987 aa16.6■□□□□ 0.25
C4A-259ENST00000498271 KLHL30Q0D2K2 578 aa16.6■□□□□ 0.25
C4A-259ENST00000498271 TACO1Q9BSH4 297 aaKnown RBP16.6■□□□□ 0.25
C4A-259ENST00000498271 PUS3Q9BZE2 481 aaKnown RBP16.6■□□□□ 0.25
C4A-259ENST00000498271 GPR108Q9NPR9 543 aa16.6■□□□□ 0.25
C4A-259ENST00000498271 ZKSCAN8Q15776 578 aaPredicted RBP16.59■□□□□ 0.25
C4A-259ENST00000498271 CNBD1Q8NA66 436 aa16.59■□□□□ 0.25
C4A-259ENST00000498271 CCDC197Q8NCU1 140 aa16.59■□□□□ 0.25
C4A-259ENST00000498271 THEGQ9P2T0 379 aa16.59■□□□□ 0.25
C4A-259ENST00000498271 ASIC3Q9UHC3 531 aa16.59■□□□□ 0.25
C4A-259ENST00000498271 GNA14O95837 355 aa16.59■□□□□ 0.25
C4A-259ENST00000498271 PDE6AP16499 860 aa16.59■□□□□ 0.25
C4A-259ENST00000498271 ABCA9Q8IUA7 1624 aa16.59■□□□□ 0.25
C4A-259ENST00000498271 RIMBP2O15034 1052 aa16.59■□□□□ 0.25
C4A-259ENST00000498271 PDIA3P30101 505 aaKnown RBP16.59■□□□□ 0.25
C4A-259ENST00000498271 DCAF17Q5H9S7 520 aaPredicted RBP16.59■□□□□ 0.25
C4A-259ENST00000498271 SSX2IPQ9Y2D8 614 aa16.59■□□□□ 0.25
C4A-259ENST00000498271 TMEM94Q12767 1356 aa16.59■□□□□ 0.25
C4A-259ENST00000498271 ZMYM1Q5SVZ6 1142 aa16.59■□□□□ 0.25
C4A-259ENST00000498271 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.59■□□□□ 0.25
C4A-259ENST00000498271 SH2D4AQ9H788 454 aa16.58■□□□□ 0.25
C4A-259ENST00000498271 NPHP4O75161 1426 aaPredicted RBP16.58■□□□□ 0.25
C4A-259ENST00000498271 POLR1AO95602 1720 aaPredicted RBP16.58■□□□□ 0.25
C4A-259ENST00000498271 MYO1CO00159 1063 aa16.58■□□□□ 0.24
C4A-259ENST00000498271 ATP1A2P50993 1020 aa16.58■□□□□ 0.24
C4A-259ENST00000498271 RNASE9P60153 205 aaKnown RBP16.58■□□□□ 0.24
C4A-259ENST00000498271 TRIM31Q9BZY9 425 aa16.58■□□□□ 0.24
C4A-259ENST00000498271 H0YIN7 160 aa16.58■□□□□ 0.24
C4A-259ENST00000498271 CIAO1O76071 339 aa16.58■□□□□ 0.24
C4A-259ENST00000498271 RFC1P35251 1148 aaPredicted RBP16.58■□□□□ 0.24
C4A-259ENST00000498271 ADD1P35611 737 aaKnown RBP16.58■□□□□ 0.24
C4A-259ENST00000498271 PPARAQ07869 468 aa16.58■□□□□ 0.24
C4A-259ENST00000498271 PNOCQ13519 176 aa16.58■□□□□ 0.24
C4A-259ENST00000498271 LONRF3Q496Y0 759 aa16.58■□□□□ 0.24
C4A-259ENST00000498271 SEPT14Q6ZU15 432 aa16.58■□□□□ 0.24
C4A-259ENST00000498271 IFNL3Q8IZI9 196 aa16.58■□□□□ 0.24
C4A-259ENST00000498271 SMIM24O75264 130 aa16.58■□□□□ 0.24
C4A-259ENST00000498271 SUN1O94901 812 aa16.58■□□□□ 0.24
C4A-259ENST00000498271 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.58■□□□□ 0.24
C4A-259ENST00000498271 DESI2Q9BSY9 194 aa16.58■□□□□ 0.24
C4A-259ENST00000498271 SASH1O94885 1247 aa16.57■□□□□ 0.24
C4A-259ENST00000498271 GAS8O95995 478 aa16.57■□□□□ 0.24
C4A-259ENST00000498271 CLTAP09496 248 aa16.57■□□□□ 0.24
C4A-259ENST00000498271 PNMA6AP0CW24 399 aaPredicted RBP16.57■□□□□ 0.24
C4A-259ENST00000498271 LIN9Q5TKA1 542 aa16.57■□□□□ 0.24
C4A-259ENST00000498271 SPATA1Q5VX52 437 aa16.57■□□□□ 0.24
C4A-259ENST00000498271 CACTINQ8WUQ7 758 aaKnown RBP16.57■□□□□ 0.24
C4A-259ENST00000498271 ANKARQ7Z5J8 1434 aa16.57■□□□□ 0.24
C4A-259ENST00000498271 UFL1O94874 794 aa16.57■□□□□ 0.24
C4A-259ENST00000498271 ADORA1P30542 326 aa16.57■□□□□ 0.24
C4A-259ENST00000498271 KIF22Q14807 665 aa16.57■□□□□ 0.24
C4A-259ENST00000498271 CCHCR1Q8TD31 782 aa16.57■□□□□ 0.24
C4A-259ENST00000498271 GDAP1L1Q96MZ0 367 aa16.57■□□□□ 0.24
C4A-259ENST00000498271 AMFRQ9UKV5 643 aa16.57■□□□□ 0.24
C4A-259ENST00000498271 ZMYM6O95789 1325 aa16.57■□□□□ 0.24
C4A-259ENST00000498271 MAP3K15Q6ZN16 1313 aa16.57■□□□□ 0.24
C4A-259ENST00000498271 SPDYE3A6NKU9 549 aa16.57■□□□□ 0.24
C4A-259ENST00000498271 H7C1D1 291 aa16.57■□□□□ 0.24
C4A-259ENST00000498271 SEC31AO94979 1220 aaKnown RBP16.57■□□□□ 0.24
C4A-259ENST00000498271 HSPA1LP34931 641 aa16.57■□□□□ 0.24
C4A-259ENST00000498271 PEX19P40855 299 aa16.57■□□□□ 0.24
C4A-259ENST00000498271 hCG_1642624A0A1W2PR95 340 aa16.57■□□□□ 0.24
C4A-259ENST00000498271 KCNJ18B7U540 433 aa16.57■□□□□ 0.24
C4A-259ENST00000498271 ERCC3P19447 782 aa16.57■□□□□ 0.24
C4A-259ENST00000498271 KCNJ12Q14500 433 aa16.57■□□□□ 0.24
C4A-259ENST00000498271 TRIM68Q6AZZ1 485 aa16.57■□□□□ 0.24
C4A-259ENST00000498271 ZNF654Q8IZM8 581 aa16.57■□□□□ 0.24
C4A-259ENST00000498271 AFAP1L2Q8N4X5 818 aa16.57■□□□□ 0.24
C4A-259ENST00000498271 SMC1BQ8NDV3 1235 aa16.57■□□□□ 0.24
C4A-259ENST00000498271 GREM2Q9H772 168 aa16.57■□□□□ 0.24
C4A-259ENST00000498271 VPS54Q9P1Q0 977 aa16.57■□□□□ 0.24
C4A-259ENST00000498271 PPRC1Q5VV67 1664 aaKnown RBP16.56■□□□□ 0.24
C4A-259ENST00000498271 KRT15P19012 456 aa16.56■□□□□ 0.24
C4A-259ENST00000498271 GUCY2FP51841 1108 aa16.56■□□□□ 0.24
C4A-259ENST00000498271 RNASELQ05823 741 aaKnown RBP16.56■□□□□ 0.24
C4A-259ENST00000498271 CCDC105Q8IYK2 499 aa16.56■□□□□ 0.24
C4A-259ENST00000498271 TXNDC9O14530 226 aa16.56■□□□□ 0.24
C4A-259ENST00000498271 ZBTB17Q13105 803 aa16.56■□□□□ 0.24
C4A-259ENST00000498271 RASIP1Q5U651 963 aa16.56■□□□□ 0.24
C4A-259ENST00000498271 EPN1Q9Y6I3 576 aaPredicted RBP16.56■□□□□ 0.24
C4A-259ENST00000498271 PTPN12Q05209 780 aaKnown RBP16.56■□□□□ 0.24
C4A-259ENST00000498271 ALS2CLQ60I27 953 aa16.56■□□□□ 0.24
C4A-259ENST00000498271 RNF14Q9UBS8 474 aa16.56■□□□□ 0.24
C4A-259ENST00000498271 PCDHA7Q9UN72 937 aa16.56■□□□□ 0.24
C4A-259ENST00000498271 MAPK8IP1Q9UQF2 711 aa16.56■□□□□ 0.24
C4A-259ENST00000498271 UAP1Q16222 522 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms