RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 CAPN2P17655 700 aa22.23■■□□□ 1.15
NKX2-1-202ENST00000498187 KRT31Q15323 416 aa22.23■■□□□ 1.15
NKX2-1-202ENST00000498187 PYM1Q9BRP8 204 aaKnown RBP22.23■■□□□ 1.15
NKX2-1-202ENST00000498187 MYO1AQ9UBC5 1043 aa22.23■■□□□ 1.15
NKX2-1-202ENST00000498187 ARPP21Q9UBL0 812 aaPredicted RBP22.23■■□□□ 1.15
NKX2-1-202ENST00000498187 MYH8P13535 1937 aa22.23■■□□□ 1.15
NKX2-1-202ENST00000498187 HSPA1LP34931 641 aa22.23■■□□□ 1.15
NKX2-1-202ENST00000498187 FXR1P51114 621 aaKnown RBP eCLIP22.23■■□□□ 1.15
NKX2-1-202ENST00000498187 LINC00116Q8NCU8 138 aa22.23■■□□□ 1.15
NKX2-1-202ENST00000498187 HIBADHP31937 336 aaKnown RBP22.22■■□□□ 1.15
NKX2-1-202ENST00000498187 LMAN1P49257 510 aa22.22■■□□□ 1.15
NKX2-1-202ENST00000498187 WHAMMP3Q1A5X7 153 aa22.22■■□□□ 1.15
NKX2-1-202ENST00000498187 RCSD1Q6JBY9 416 aa22.22■■□□□ 1.15
NKX2-1-202ENST00000498187 NAPGQ99747 312 aaPredicted RBP22.22■■□□□ 1.15
NKX2-1-202ENST00000498187 GBP3Q9H0R5 595 aa22.22■■□□□ 1.15
NKX2-1-202ENST00000498187 LIMA1Q9UHB6 759 aaKnown RBP22.22■■□□□ 1.15
NKX2-1-202ENST00000498187 RWDD2AQ9UIY3 292 aa22.22■■□□□ 1.15
NKX2-1-202ENST00000498187 RPS8P62241 208 aaKnown RBP22.22■■□□□ 1.15
NKX2-1-202ENST00000498187 MCM6Q14566 821 aa22.22■■□□□ 1.15
NKX2-1-202ENST00000498187 SLC4A8Q2Y0W8 1093 aa22.22■■□□□ 1.15
NKX2-1-202ENST00000498187 SBK1Q52WX2 424 aa22.22■■□□□ 1.15
NKX2-1-202ENST00000498187 TBC1D9BQ66K14 1250 aa22.22■■□□□ 1.15
NKX2-1-202ENST00000498187 SLC35F6Q8N357 371 aa22.22■■□□□ 1.15
NKX2-1-202ENST00000498187 PDE11AQ9HCR9 933 aa22.22■■□□□ 1.15
NKX2-1-202ENST00000498187 L1RE1Q9UN81 338 aa22.22■■□□□ 1.15
NKX2-1-202ENST00000498187 PDS5AQ29RF7 1337 aaKnown RBP22.21■■□□□ 1.15
NKX2-1-202ENST00000498187 CTAGE15A4D2H0 777 aa22.21■■□□□ 1.15
NKX2-1-202ENST00000498187 N4BP3O15049 544 aa22.21■■□□□ 1.15
NKX2-1-202ENST00000498187 CTAGE8P0CG41 777 aa22.21■■□□□ 1.15
NKX2-1-202ENST00000498187 KIF5BP33176 963 aa22.21■■□□□ 1.15
NKX2-1-202ENST00000498187 PAK1Q13153 545 aa22.21■■□□□ 1.15
NKX2-1-202ENST00000498187 CTAGE6Q86UF2 777 aa22.21■■□□□ 1.15
NKX2-1-202ENST00000498187 CTAGE4Q8IX94 777 aa22.21■■□□□ 1.15
NKX2-1-202ENST00000498187 PNKPQ96T60 521 aa22.21■■□□□ 1.15
NKX2-1-202ENST00000498187 CCDC88AQ3V6T2 1871 aa22.21■■□□□ 1.15
NKX2-1-202ENST00000498187 GYS2P54840 703 aa22.2■■□□□ 1.15
NKX2-1-202ENST00000498187 KCNQ4P56696 695 aa22.2■■□□□ 1.15
NKX2-1-202ENST00000498187 SLC10A5Q5PT55 438 aa22.2■■□□□ 1.15
NKX2-1-202ENST00000498187 SMIM5Q71RC9 77 aa22.2■■□□□ 1.15
NKX2-1-202ENST00000498187 NELFBQ8WX92 580 aa22.2■■□□□ 1.15
NKX2-1-202ENST00000498187 VPS16Q9H269 839 aa22.2■■□□□ 1.15
NKX2-1-202ENST00000498187 JAG2Q9Y219 1238 aa22.2■■□□□ 1.15
NKX2-1-202ENST00000498187 MAST2Q6P0Q8 1798 aa22.2■■□□□ 1.14
NKX2-1-202ENST00000498187 FAM205AQ6ZU69 1335 aa22.2■■□□□ 1.14
NKX2-1-202ENST00000498187 LRRC10BA6NIK2 292 aa22.2■■□□□ 1.14
NKX2-1-202ENST00000498187 RGL2O15211 777 aa22.2■■□□□ 1.14
NKX2-1-202ENST00000498187 SPAG1Q07617 926 aa22.2■■□□□ 1.14
NKX2-1-202ENST00000498187 TRIM14Q14142 442 aa22.2■■□□□ 1.14
NKX2-1-202ENST00000498187 ZNF658Q5TYW1 1059 aaPredicted RBP22.2■■□□□ 1.14
NKX2-1-202ENST00000498187 ARL6IP4Q66PJ3 421 aaKnown RBP22.2■■□□□ 1.14
NKX2-1-202ENST00000498187 CYP26C1Q6V0L0 522 aa22.2■■□□□ 1.14
NKX2-1-202ENST00000498187 BLIDQ8IZY5 108 aa22.2■■□□□ 1.14
NKX2-1-202ENST00000498187 TRERF1Q96PN7 1200 aa22.2■■□□□ 1.14
NKX2-1-202ENST00000498187 MCM9Q9NXL9 1143 aa22.2■■□□□ 1.14
NKX2-1-202ENST00000498187 RPN1P04843 607 aaKnown RBP22.19■■□□□ 1.14
NKX2-1-202ENST00000498187 CALML3P27482 149 aa22.19■■□□□ 1.14
NKX2-1-202ENST00000498187 CDC25AP30304 524 aa22.19■■□□□ 1.14
NKX2-1-202ENST00000498187 COPB1P53618 953 aaKnown RBP22.19■■□□□ 1.14
NKX2-1-202ENST00000498187 C4orf32Q8N8J7 132 aa22.19■■□□□ 1.14
NKX2-1-202ENST00000498187 ANKRD20A12PQ8NF67 263 aa22.19■■□□□ 1.14
NKX2-1-202ENST00000498187 GPKOWQ92917 476 aaPredicted RBP eCLIP22.19■■□□□ 1.14
NKX2-1-202ENST00000498187 KAT14Q9H8E8 782 aa22.19■■□□□ 1.14
NKX2-1-202ENST00000498187 ABCB6Q9NP58 842 aa22.19■■□□□ 1.14
NKX2-1-202ENST00000498187 TAB2Q9NYJ8 693 aa22.19■■□□□ 1.14
NKX2-1-202ENST00000498187 LONP1P36776 959 aaKnown RBP22.19■■□□□ 1.14
NKX2-1-202ENST00000498187 ABHD10Q9NUJ1 306 aa22.19■■□□□ 1.14
NKX2-1-202ENST00000498187 RMND1Q9NWS8 449 aa22.19■■□□□ 1.14
NKX2-1-202ENST00000498187 KCNJ18B7U540 433 aa22.18■■□□□ 1.14
NKX2-1-202ENST00000498187 USP17L8P0C7I0 530 aa22.18■■□□□ 1.14
NKX2-1-202ENST00000498187 ACTN2P35609 894 aa22.18■■□□□ 1.14
NKX2-1-202ENST00000498187 KCNJ12Q14500 433 aa22.18■■□□□ 1.14
NKX2-1-202ENST00000498187 TCP11X2Q5H9J9 407 aa22.18■■□□□ 1.14
NKX2-1-202ENST00000498187 ACRBPQ8NEB7 543 aa22.18■■□□□ 1.14
NKX2-1-202ENST00000498187 VPS18Q9P253 973 aa22.18■■□□□ 1.14
NKX2-1-202ENST00000498187 FEZ2Q9UHY8 353 aaPredicted RBP22.18■■□□□ 1.14
NKX2-1-202ENST00000498187 MAPK8IP1Q9UQF2 711 aa22.18■■□□□ 1.14
NKX2-1-202ENST00000498187 GDAQ9Y2T3 454 aa22.18■■□□□ 1.14
NKX2-1-202ENST00000498187 STAT6P42226 847 aa22.18■■□□□ 1.14
NKX2-1-202ENST00000498187 RASGRP4Q8TDF6 673 aa22.18■■□□□ 1.14
NKX2-1-202ENST00000498187 ERVK-24P63145 666 aa22.17■■□□□ 1.14
NKX2-1-202ENST00000498187 TFAP4Q01664 338 aa22.17■■□□□ 1.14
NKX2-1-202ENST00000498187 LEKR1Q6ZMV7 388 aa22.17■■□□□ 1.14
NKX2-1-202ENST00000498187 NLRP3Q96P20 1036 aa22.17■■□□□ 1.14
NKX2-1-202ENST00000498187 NUP88Q99567 741 aaPredicted RBP22.17■■□□□ 1.14
NKX2-1-202ENST00000498187 ANKRD2Q9GZV1 360 aa22.17■■□□□ 1.14
NKX2-1-202ENST00000498187 PCDHA4Q9UN74 947 aa22.17■■□□□ 1.14
NKX2-1-202ENST00000498187 RNF225M0QZC1 329 aaPredicted RBP22.17■■□□□ 1.14
NKX2-1-202ENST00000498187 RHOXF2BP0C7M4 288 aa22.17■■□□□ 1.14
NKX2-1-202ENST00000498187 TXNRD3Q86VQ6 643 aa22.17■■□□□ 1.14
NKX2-1-202ENST00000498187 STAG2Q8N3U4 1231 aa22.17■■□□□ 1.14
NKX2-1-202ENST00000498187 RHOXF2Q9BQY4 288 aa22.17■■□□□ 1.14
NKX2-1-202ENST00000498187 ACBD3Q9H3P7 528 aa22.17■■□□□ 1.14
NKX2-1-202ENST00000498187 IL17RBQ9NRM6 502 aa22.17■■□□□ 1.14
NKX2-1-202ENST00000498187 PRCPP42785 496 aa22.16■■□□□ 1.14
NKX2-1-202ENST00000498187 DZIP1Q86YF9 867 aaKnown RBP22.16■■□□□ 1.14
NKX2-1-202ENST00000498187 PNMA1Q8ND90 353 aa22.16■■□□□ 1.14
NKX2-1-202ENST00000498187 SH3GLB2Q9NR46 395 aa22.16■■□□□ 1.14
NKX2-1-202ENST00000498187 HSP90B2PQ58FF3 399 aa22.15■■□□□ 1.14
NKX2-1-202ENST00000498187 CCDC24Q8N4L8 307 aa22.15■■□□□ 1.14
NKX2-1-202ENST00000498187 DISC1Q9NRI5 854 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms