RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 MAP3K14Q99558 947 aa18.67■□□□□ 0.58
SSBP1-214ENST00000498107 ZSWIM6Q9HCJ5 1215 aa18.67■□□□□ 0.58
SSBP1-214ENST00000498107 TXNRD2Q9NNW7 524 aa18.67■□□□□ 0.58
SSBP1-214ENST00000498107 GPCPD1Q9NPB8 672 aa18.67■□□□□ 0.58
SSBP1-214ENST00000498107 SLC12A7Q9Y666 1083 aa18.67■□□□□ 0.58
SSBP1-214ENST00000498107 FMNL1O95466 1100 aaPredicted RBP18.66■□□□□ 0.58
SSBP1-214ENST00000498107 MAPK4P31152 587 aa18.66■□□□□ 0.58
SSBP1-214ENST00000498107 KIF5BP33176 963 aa18.66■□□□□ 0.58
SSBP1-214ENST00000498107 PSMC4P43686 418 aa18.66■□□□□ 0.58
SSBP1-214ENST00000498107 OAZ1P54368 228 aa18.66■□□□□ 0.58
SSBP1-214ENST00000498107 ZNF654Q8IZM8 581 aa18.66■□□□□ 0.58
SSBP1-214ENST00000498107 FBXL16Q8N461 479 aa18.66■□□□□ 0.58
SSBP1-214ENST00000498107 LRRC2Q9BYS8 371 aa18.66■□□□□ 0.58
SSBP1-214ENST00000498107 EFCC1Q9HA90 598 aa18.66■□□□□ 0.58
SSBP1-214ENST00000498107 CWC22Q9HCG8 908 aaKnown RBP18.66■□□□□ 0.58
SSBP1-214ENST00000498107 PNMA2Q9UL42 364 aa18.66■□□□□ 0.58
SSBP1-214ENST00000498107 FRMPD2Q68DX3 1309 aaPredicted RBP18.66■□□□□ 0.58
SSBP1-214ENST00000498107 A0A0G2JMZ2 1700 aa18.66■□□□□ 0.58
SSBP1-214ENST00000498107 CNMDO75829 334 aa18.65■□□□□ 0.58
SSBP1-214ENST00000498107 SLC25A27O95847 323 aa18.65■□□□□ 0.58
SSBP1-214ENST00000498107 TROAPQ12815 778 aa18.65■□□□□ 0.58
SSBP1-214ENST00000498107 PLS1Q14651 629 aa18.65■□□□□ 0.58
SSBP1-214ENST00000498107 GRM4Q14833 912 aa18.65■□□□□ 0.58
SSBP1-214ENST00000498107 SYDE2Q5VT97 1194 aa18.65■□□□□ 0.58
SSBP1-214ENST00000498107 CTU1Q7Z7A3 348 aaKnown RBP18.65■□□□□ 0.58
SSBP1-214ENST00000498107 CTCFLQ8NI51 663 aaPredicted RBP18.65■□□□□ 0.58
SSBP1-214ENST00000498107 COA7Q96BR5 231 aa18.65■□□□□ 0.58
SSBP1-214ENST00000498107 IL17RAQ96F46 866 aa18.65■□□□□ 0.58
SSBP1-214ENST00000498107 SPATC1LQ9H0A9 340 aa18.65■□□□□ 0.58
SSBP1-214ENST00000498107 SLC38A10Q9HBR0 1119 aa18.65■□□□□ 0.58
SSBP1-214ENST00000498107 BTBD7Q9P203 1132 aa18.65■□□□□ 0.58
SSBP1-214ENST00000498107 PRR12Q9ULL5 1215 aa18.65■□□□□ 0.58
SSBP1-214ENST00000498107 TNPO2O14787 897 aaKnown RBP18.64■□□□□ 0.57
SSBP1-214ENST00000498107 ATP2A1O14983 1001 aa18.64■□□□□ 0.57
SSBP1-214ENST00000498107 CAPN15O75808 1086 aa18.64■□□□□ 0.57
SSBP1-214ENST00000498107 STAT3P40763 770 aa18.64■□□□□ 0.57
SSBP1-214ENST00000498107 PRMT2P55345 433 aa18.64■□□□□ 0.57
SSBP1-214ENST00000498107 TMEM132BQ14DG7 1078 aa18.64■□□□□ 0.57
SSBP1-214ENST00000498107 PKN2Q16513 984 aaKnown RBP18.64■□□□□ 0.57
SSBP1-214ENST00000498107 Q3C1V9 767 aa18.64■□□□□ 0.57
SSBP1-214ENST00000498107 Q6ZUG5 572 aa18.64■□□□□ 0.57
SSBP1-214ENST00000498107 SHCBP1Q8NEM2 672 aa18.64■□□□□ 0.57
SSBP1-214ENST00000498107 NUP133Q8WUM0 1156 aa18.64■□□□□ 0.57
SSBP1-214ENST00000498107 TCEANC2Q96MN5 208 aa18.64■□□□□ 0.57
SSBP1-214ENST00000498107 TEX13BQ9BXU2 312 aa18.64■□□□□ 0.57
SSBP1-214ENST00000498107 SENP2Q9HC62 589 aa18.64■□□□□ 0.57
SSBP1-214ENST00000498107 GPHNQ9NQX3 736 aaPredicted RBP18.64■□□□□ 0.57
SSBP1-214ENST00000498107 PALM3A6NDB9 673 aaPredicted RBP18.63■□□□□ 0.57
SSBP1-214ENST00000498107 GOLGA8HP0CJ92 632 aa18.63■□□□□ 0.57
SSBP1-214ENST00000498107 GNAQP50148 359 aa18.63■□□□□ 0.57
SSBP1-214ENST00000498107 RCAN1P53805 252 aa18.63■□□□□ 0.57
SSBP1-214ENST00000498107 COL9A3Q14050 684 aaPredicted RBP18.63■□□□□ 0.57
SSBP1-214ENST00000498107 TTBK2Q6IQ55 1244 aa18.63■□□□□ 0.57
SSBP1-214ENST00000498107 POTEEQ6S8J3 1075 aa18.63■□□□□ 0.57
SSBP1-214ENST00000498107 RASGRP2Q7LDG7 609 aa18.63■□□□□ 0.57
SSBP1-214ENST00000498107 REPS2Q8NFH8 660 aa18.63■□□□□ 0.57
SSBP1-214ENST00000498107 LZTS2Q9BRK4 669 aa18.63■□□□□ 0.57
SSBP1-214ENST00000498107 C22orf23Q9BZE7 217 aa18.63■□□□□ 0.57
SSBP1-214ENST00000498107 MROH8Q9H579 483 aa18.63■□□□□ 0.57
SSBP1-214ENST00000498107 TRIM17Q9Y577 477 aa18.63■□□□□ 0.57
SSBP1-214ENST00000498107 MGAMO43451 1857 aa18.63■□□□□ 0.57
SSBP1-214ENST00000498107 KLRF2D3W0D1 207 aa18.62■□□□□ 0.57
SSBP1-214ENST00000498107 CPA1P15085 419 aa18.62■□□□□ 0.57
SSBP1-214ENST00000498107 SLC16A2P36021 539 aa18.62■□□□□ 0.57
SSBP1-214ENST00000498107 PPP2R5BQ15173 497 aa18.62■□□□□ 0.57
SSBP1-214ENST00000498107 RIOX2Q8IUF8 465 aa18.62■□□□□ 0.57
SSBP1-214ENST00000498107 TRIM47Q96LD4 638 aa18.62■□□□□ 0.57
SSBP1-214ENST00000498107 MOV10L1Q9BXT6 1211 aaKnown RBP18.62■□□□□ 0.57
SSBP1-214ENST00000498107 AGXT2Q9BYV1 514 aa18.62■□□□□ 0.57
SSBP1-214ENST00000498107 RANBP17Q9H2T7 1088 aaKnown RBP18.62■□□□□ 0.57
SSBP1-214ENST00000498107 PDRG1Q9NUG6 133 aa18.62■□□□□ 0.57
SSBP1-214ENST00000498107 MAD2L2Q9UI95 211 aa18.62■□□□□ 0.57
SSBP1-214ENST00000498107 ZNF214Q9UL59 606 aaPredicted RBP18.62■□□□□ 0.57
SSBP1-214ENST00000498107 IVNS1ABPQ9Y6Y0 642 aa18.62■□□□□ 0.57
SSBP1-214ENST00000498107 COL11A1P12107 1806 aaPredicted RBP18.62■□□□□ 0.57
SSBP1-214ENST00000498107 ZBTB43O43298 467 aa18.61■□□□□ 0.57
SSBP1-214ENST00000498107 DHX16O60231 1041 aaKnown RBP18.61■□□□□ 0.57
SSBP1-214ENST00000498107 WDR78Q5VTH9 848 aa18.61■□□□□ 0.57
SSBP1-214ENST00000498107 SNRNP48Q6IEG0 339 aaKnown RBP18.61■□□□□ 0.57
SSBP1-214ENST00000498107 APOA5Q6Q788 366 aa18.61■□□□□ 0.57
SSBP1-214ENST00000498107 OTOP1Q7RTM1 612 aa18.61■□□□□ 0.57
SSBP1-214ENST00000498107 PLEKHH3Q7Z736 793 aa18.61■□□□□ 0.57
SSBP1-214ENST00000498107 NCAPG2Q86XI2 1143 aa18.61■□□□□ 0.57
SSBP1-214ENST00000498107 CPXCR1Q8N123 301 aa18.61■□□□□ 0.57
SSBP1-214ENST00000498107 BRF1Q92994 677 aa18.61■□□□□ 0.57
SSBP1-214ENST00000498107 UPF3BQ9BZI7 483 aaKnown RBP18.61■□□□□ 0.57
SSBP1-214ENST00000498107 ARHGAP39Q9C0H5 1083 aa18.61■□□□□ 0.57
SSBP1-214ENST00000498107 RBM28Q9NW13 759 aaKnown RBP18.61■□□□□ 0.57
SSBP1-214ENST00000498107 KLF18A0A0U1RQI7 1052 aa18.6■□□□□ 0.57
SSBP1-214ENST00000498107 STRNO43815 780 aa18.6■□□□□ 0.57
SSBP1-214ENST00000498107 PEX10O60683 326 aa18.6■□□□□ 0.57
SSBP1-214ENST00000498107 ERCC3P19447 782 aa18.6■□□□□ 0.57
SSBP1-214ENST00000498107 SMARCA1P28370 1054 aa18.6■□□□□ 0.57
SSBP1-214ENST00000498107 RBM25P49756 843 aaKnown RBP18.6■□□□□ 0.57
SSBP1-214ENST00000498107 ANKRD1Q15327 319 aa18.6■□□□□ 0.57
SSBP1-214ENST00000498107 TKFCQ3LXA3 575 aa18.6■□□□□ 0.57
SSBP1-214ENST00000498107 GPR142Q7Z601 462 aa18.6■□□□□ 0.57
SSBP1-214ENST00000498107 MICU3Q86XE3 530 aa18.6■□□□□ 0.57
SSBP1-214ENST00000498107 FANCBQ8NB91 859 aa18.6■□□□□ 0.57
SSBP1-214ENST00000498107 SOCS4Q8WXH5 440 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms