RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 ADAMTS8Q9UP79 889 aa7.41□□□□□ -1.22
TMEM39A-212ENST00000497993 R3HCC1Q9Y3T6 440 aaKnown RBP7.41□□□□□ -1.22
TMEM39A-212ENST00000497993 CAMTA2O94983 1202 aa7.4□□□□□ -1.22
TMEM39A-212ENST00000497993 RAB33AQ14088 237 aa7.4□□□□□ -1.22
TMEM39A-212ENST00000497993 DCTN1Q14203 1278 aa7.4□□□□□ -1.22
TMEM39A-212ENST00000497993 HSP90AB4PQ58FF6 505 aa7.4□□□□□ -1.22
TMEM39A-212ENST00000497993 ODR4Q5SWX8 454 aa7.4□□□□□ -1.22
TMEM39A-212ENST00000497993 MSL1Q68DK7 614 aa7.4□□□□□ -1.22
TMEM39A-212ENST00000497993 KRT25Q7Z3Z0 450 aa7.4□□□□□ -1.22
TMEM39A-212ENST00000497993 HOMER1Q86YM7 354 aa7.4□□□□□ -1.22
TMEM39A-212ENST00000497993 FANCLQ9NW38 375 aa7.4□□□□□ -1.22
TMEM39A-212ENST00000497993 TLR7Q9NYK1 1049 aaKnown RBP7.4□□□□□ -1.22
TMEM39A-212ENST00000497993 USP16Q9Y5T5 823 aa7.4□□□□□ -1.22
TMEM39A-212ENST00000497993 CARMIL3Q8ND23 1372 aa7.4□□□□□ -1.22
TMEM39A-212ENST00000497993 PSME4Q14997 1843 aa7.39□□□□□ -1.23
TMEM39A-212ENST00000497993 SOX18P35713 384 aa7.39□□□□□ -1.23
TMEM39A-212ENST00000497993 RIPK4P57078 832 aa7.39□□□□□ -1.23
TMEM39A-212ENST00000497993 BIRC2Q13490 618 aa7.39□□□□□ -1.23
TMEM39A-212ENST00000497993 NFIXQ14938 502 aa7.39□□□□□ -1.23
TMEM39A-212ENST00000497993 WDR43Q15061 677 aaKnown RBP eCLIP7.39□□□□□ -1.23
TMEM39A-212ENST00000497993 SMIM5Q71RC9 77 aa7.39□□□□□ -1.23
TMEM39A-212ENST00000497993 DHX32Q7L7V1 743 aaKnown RBP7.39□□□□□ -1.23
TMEM39A-212ENST00000497993 APBB1IPQ7Z5R6 666 aaPredicted RBP7.39□□□□□ -1.23
TMEM39A-212ENST00000497993 FERMT3Q86UX7 667 aa7.39□□□□□ -1.23
TMEM39A-212ENST00000497993 NGEFQ8N5V2 710 aa7.39□□□□□ -1.23
TMEM39A-212ENST00000497993 SH3TC2Q8TF17 1288 aa7.39□□□□□ -1.23
TMEM39A-212ENST00000497993 RELTQ969Z4 430 aa7.39□□□□□ -1.23
TMEM39A-212ENST00000497993 SPON2Q9BUD6 331 aa7.39□□□□□ -1.23
TMEM39A-212ENST00000497993 UBE2OQ9C0C9 1292 aaKnown RBP7.39□□□□□ -1.23
TMEM39A-212ENST00000497993 FAM8A1Q9UBU6 413 aa7.39□□□□□ -1.23
TMEM39A-212ENST00000497993 STK17AQ9UEE5 414 aa7.39□□□□□ -1.23
TMEM39A-212ENST00000497993 SRP68Q9UHB9 627 aaKnown RBP7.39□□□□□ -1.23
TMEM39A-212ENST00000497993 LTBP1Q14766 1721 aa7.38□□□□□ -1.23
TMEM39A-212ENST00000497993 SNED1Q8TER0 1413 aa7.38□□□□□ -1.23
TMEM39A-212ENST00000497993 ERVV-1B6SEH8 477 aa7.38□□□□□ -1.23
TMEM39A-212ENST00000497993 GRIN3BO60391 1043 aa7.38□□□□□ -1.23
TMEM39A-212ENST00000497993 CPNE3O75131 537 aaKnown RBP7.38□□□□□ -1.23
TMEM39A-212ENST00000497993 PSAPP07602 524 aa7.38□□□□□ -1.23
TMEM39A-212ENST00000497993 YBX3P16989 372 aaKnown RBP eCLIP7.38□□□□□ -1.23
TMEM39A-212ENST00000497993 KCNA3P22001 575 aa7.38□□□□□ -1.23
TMEM39A-212ENST00000497993 ADH7P40394 386 aa7.38□□□□□ -1.23
TMEM39A-212ENST00000497993 NASPP49321 788 aaPredicted RBP7.38□□□□□ -1.23
TMEM39A-212ENST00000497993 ORC1Q13415 861 aa7.38□□□□□ -1.23
TMEM39A-212ENST00000497993 CNGB1Q14028 1251 aaPredicted RBP7.38□□□□□ -1.23
TMEM39A-212ENST00000497993 C8orf34Q49A92 452 aa7.38□□□□□ -1.23
TMEM39A-212ENST00000497993 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.38□□□□□ -1.23
TMEM39A-212ENST00000497993 TTC39BQ5VTQ0 682 aaPredicted RBP7.38□□□□□ -1.23
TMEM39A-212ENST00000497993 USPL1Q5W0Q7 1092 aa7.38□□□□□ -1.23
TMEM39A-212ENST00000497993 ZNF438Q7Z4V0 828 aa7.38□□□□□ -1.23
TMEM39A-212ENST00000497993 KIAA0825Q8IV33 1275 aa7.38□□□□□ -1.23
TMEM39A-212ENST00000497993 NEDD1Q8NHV4 660 aa7.38□□□□□ -1.23
TMEM39A-212ENST00000497993 TRPM4Q8TD43 1214 aa7.38□□□□□ -1.23
TMEM39A-212ENST00000497993 BTBD6Q96KE9 485 aa7.38□□□□□ -1.23
TMEM39A-212ENST00000497993 C8orf48Q96LL4 319 aa7.38□□□□□ -1.23
TMEM39A-212ENST00000497993 ELP3Q9H9T3 547 aa7.38□□□□□ -1.23
TMEM39A-212ENST00000497993 ABI2Q9NYB9 513 aaPredicted RBP7.38□□□□□ -1.23
TMEM39A-212ENST00000497993 TCEAL9Q9UHQ7 104 aa7.38□□□□□ -1.23
TMEM39A-212ENST00000497993 IL16Q14005 1332 aa7.37□□□□□ -1.23
TMEM39A-212ENST00000497993 RNF123Q5XPI4 1314 aa7.37□□□□□ -1.23
TMEM39A-212ENST00000497993 PRAMEF22A3QJZ6 481 aa7.37□□□□□ -1.23
TMEM39A-212ENST00000497993 KLRG2A4D1S0 409 aaPredicted RBP7.37□□□□□ -1.23
TMEM39A-212ENST00000497993 SHISA8B8ZZ34 492 aa7.37□□□□□ -1.23
TMEM39A-212ENST00000497993 MMP20O60882 483 aa7.37□□□□□ -1.23
TMEM39A-212ENST00000497993 A1BGP04217 495 aa7.37□□□□□ -1.23
TMEM39A-212ENST00000497993 HOXD8P13378 290 aaPredicted RBP7.37□□□□□ -1.23
TMEM39A-212ENST00000497993 NRLP54845 237 aa7.37□□□□□ -1.23
TMEM39A-212ENST00000497993 PLAURQ03405 335 aa7.37□□□□□ -1.23
TMEM39A-212ENST00000497993 PWP1Q13610 501 aa7.37□□□□□ -1.23
TMEM39A-212ENST00000497993 RASA3Q14644 834 aa7.37□□□□□ -1.23
TMEM39A-212ENST00000497993 KANK3Q6NY19 840 aa7.37□□□□□ -1.23
TMEM39A-212ENST00000497993 KIAA0907Q7Z7F0 614 aaPredicted RBP7.37□□□□□ -1.23
TMEM39A-212ENST00000497993 THUMPD2Q9BTF0 503 aaKnown RBP7.37□□□□□ -1.23
TMEM39A-212ENST00000497993 SRCIN1Q9C0H9 1055 aa7.37□□□□□ -1.23
TMEM39A-212ENST00000497993 IGFLR1Q9H665 355 aa7.37□□□□□ -1.23
TMEM39A-212ENST00000497993 DNAJB12Q9NXW2 375 aaKnown RBP7.37□□□□□ -1.23
TMEM39A-212ENST00000497993 A0A1B0GUL6 1792 aa7.37□□□□□ -1.23
TMEM39A-212ENST00000497993 TAF1P21675 1872 aa7.36□□□□□ -1.23
TMEM39A-212ENST00000497993 SCN4AP35499 1836 aa7.36□□□□□ -1.23
TMEM39A-212ENST00000497993 WDR90Q96KV7 1748 aa7.36□□□□□ -1.23
TMEM39A-212ENST00000497993 MAP3K15Q6ZN16 1313 aa7.36□□□□□ -1.23
TMEM39A-212ENST00000497993 ZNF521Q96K83 1311 aa7.36□□□□□ -1.23
TMEM39A-212ENST00000497993 KLF4O43474 513 aa7.36□□□□□ -1.23
TMEM39A-212ENST00000497993 GYS2P54840 703 aa7.36□□□□□ -1.23
TMEM39A-212ENST00000497993 RHBDL3P58872 404 aa7.36□□□□□ -1.23
TMEM39A-212ENST00000497993 GPLD1P80108 840 aa7.36□□□□□ -1.23
TMEM39A-212ENST00000497993 CALD1Q05682 793 aaKnown RBP7.36□□□□□ -1.23
TMEM39A-212ENST00000497993 COL9A2Q14055 689 aaPredicted RBP7.36□□□□□ -1.23
TMEM39A-212ENST00000497993 MEI1Q5TIA1 1274 aa7.36□□□□□ -1.23
TMEM39A-212ENST00000497993 CCSAPQ6IQ19 270 aaPredicted RBP7.36□□□□□ -1.23
TMEM39A-212ENST00000497993 TSHZ1Q6ZSZ6 1077 aa7.36□□□□□ -1.23
TMEM39A-212ENST00000497993 CHSY3Q70JA7 882 aa7.36□□□□□ -1.23
TMEM39A-212ENST00000497993 OR13H1Q8NG92 308 aa7.36□□□□□ -1.23
TMEM39A-212ENST00000497993 PMEPA1Q969W9 287 aa7.36□□□□□ -1.23
TMEM39A-212ENST00000497993 TSPYL4Q9UJ04 414 aa7.36□□□□□ -1.23
TMEM39A-212ENST00000497993 SLC6A14Q9UN76 642 aa7.36□□□□□ -1.23
TMEM39A-212ENST00000497993 LTBP3Q9NS15 1303 aa7.35□□□□□ -1.23
TMEM39A-212ENST00000497993 ANP32CO43423 234 aa7.35□□□□□ -1.23
TMEM39A-212ENST00000497993 SERPINB2P05120 415 aa7.35□□□□□ -1.23
TMEM39A-212ENST00000497993 AMPD1P23109 780 aa7.35□□□□□ -1.23
TMEM39A-212ENST00000497993 ETFBP38117 255 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms