RNA–Protein interactions for RNA: ENST00000497700.1

ELL3-208, Transcript of elongation factor for RNA polymerase II 3, humanhuman

TSL 3

Gene ELL3, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-208ENST00000497700 RARBP10826 455 aa21.4■■□□□ 1.02
ELL3-208ENST00000497700 SLC4A3P48751 1232 aa21.4■■□□□ 1.02
ELL3-208ENST00000497700 TLE2Q04725 743 aa21.4■■□□□ 1.02
ELL3-208ENST00000497700 OSBP2Q969R2 916 aa21.4■■□□□ 1.02
ELL3-208ENST00000497700 ARPP21Q9UBL0 812 aaPredicted RBP21.4■■□□□ 1.02
ELL3-208ENST00000497700 RIPK3Q9Y572 518 aa21.4■■□□□ 1.02
ELL3-208ENST00000497700 EYSQ5T1H1 3165 aa21.39■■□□□ 1.02
ELL3-208ENST00000497700 ZNF865P0CJ78 1059 aaPredicted RBP21.39■■□□□ 1.01
ELL3-208ENST00000497700 ZSCAN25Q6NSZ9 544 aa21.39■■□□□ 1.01
ELL3-208ENST00000497700 EPB41L4AQ9HCS5 686 aaPredicted RBP21.39■■□□□ 1.01
ELL3-208ENST00000497700 PHF24Q9UPV7 400 aa21.39■■□□□ 1.01
ELL3-208ENST00000497700 CUL9Q8IWT3 2517 aa21.39■■□□□ 1.01
ELL3-208ENST00000497700 IRX5P78411 483 aaPredicted RBP21.38■■□□□ 1.01
ELL3-208ENST00000497700 ZNF697Q5TEC3 545 aa21.38■■□□□ 1.01
ELL3-208ENST00000497700 FAM109BQ6ICB4 259 aaPredicted RBP21.38■■□□□ 1.01
ELL3-208ENST00000497700 SNRNP48Q6IEG0 339 aaKnown RBP21.38■■□□□ 1.01
ELL3-208ENST00000497700 SLF1Q9BQI6 1058 aa21.38■■□□□ 1.01
ELL3-208ENST00000497700 ECHDC1Q9NTX5 307 aa21.38■■□□□ 1.01
ELL3-208ENST00000497700 F5H6K3 240 aa21.37■■□□□ 1.01
ELL3-208ENST00000497700 M0R2C6 588 aa21.37■■□□□ 1.01
ELL3-208ENST00000497700 PRDM1O75626 825 aa21.37■■□□□ 1.01
ELL3-208ENST00000497700 NDUFB10O96000 172 aa21.37■■□□□ 1.01
ELL3-208ENST00000497700 EPHB4P54760 987 aa21.37■■□□□ 1.01
ELL3-208ENST00000497700 KLRC3Q07444 240 aa21.37■■□□□ 1.01
ELL3-208ENST00000497700 CPXCR1Q8N123 301 aa21.37■■□□□ 1.01
ELL3-208ENST00000497700 A0A1W2PQ45 241 aaPredicted RBP21.36■■□□□ 1.01
ELL3-208ENST00000497700 A0A1W2PQY0 241 aa21.36■■□□□ 1.01
ELL3-208ENST00000497700 PQBP1O60828 265 aaKnown RBP21.36■■□□□ 1.01
ELL3-208ENST00000497700 SBK1Q52WX2 424 aa21.36■■□□□ 1.01
ELL3-208ENST00000497700 KBTBD3Q8NAB2 608 aa21.36■■□□□ 1.01
ELL3-208ENST00000497700 MKNK2Q9HBH9 465 aa21.36■■□□□ 1.01
ELL3-208ENST00000497700 NRBP1Q9UHY1 535 aa21.36■■□□□ 1.01
ELL3-208ENST00000497700 ROBO3Q96MS0 1386 aa21.36■■□□□ 1.01
ELL3-208ENST00000497700 MYADML2A6NDP7 307 aa21.35■■□□□ 1.01
ELL3-208ENST00000497700 ADAMTS4O75173 837 aa21.35■■□□□ 1.01
ELL3-208ENST00000497700 SNAI1O95863 264 aaPredicted RBP21.35■■□□□ 1.01
ELL3-208ENST00000497700 AKR1A1P14550 325 aa21.35■■□□□ 1.01
ELL3-208ENST00000497700 C1orf53Q5VUE5 145 aa21.35■■□□□ 1.01
ELL3-208ENST00000497700 RNF180Q86T96 592 aa21.35■■□□□ 1.01
ELL3-208ENST00000497700 PLEKHM2Q8IWE5 1019 aa21.35■■□□□ 1.01
ELL3-208ENST00000497700 LRRC47Q8N1G4 583 aaKnown RBP21.35■■□□□ 1.01
ELL3-208ENST00000497700 APPBP2Q92624 585 aa21.35■■□□□ 1.01
ELL3-208ENST00000497700 TEX13BQ9BXU2 312 aa21.35■■□□□ 1.01
ELL3-208ENST00000497700 NYAP2Q9P242 653 aa21.35■■□□□ 1.01
ELL3-208ENST00000497700 CLIP2Q9UDT6 1046 aa21.35■■□□□ 1.01
ELL3-208ENST00000497700 DIS3Q9Y2L1 958 aaKnown RBP21.35■■□□□ 1.01
ELL3-208ENST00000497700 SYNRGQ9UMZ2 1314 aa21.34■■□□□ 1.01
ELL3-208ENST00000497700 GPAA1O43292 621 aa21.34■■□□□ 1.01
ELL3-208ENST00000497700 CLTBP09497 229 aa21.34■■□□□ 1.01
ELL3-208ENST00000497700 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.34■■□□□ 1.01
ELL3-208ENST00000497700 CHMP4CQ96CF2 233 aa21.34■■□□□ 1.01
ELL3-208ENST00000497700 CDX2Q99626 313 aaPredicted RBP21.34■■□□□ 1.01
ELL3-208ENST00000497700 COL25A1Q9BXS0 654 aaPredicted RBP21.34■■□□□ 1.01
ELL3-208ENST00000497700 TTYH1Q9H313 450 aaPredicted RBP21.34■■□□□ 1.01
ELL3-208ENST00000497700 RAVER2Q9HCJ3 691 aaKnown RBP21.34■■□□□ 1.01
ELL3-208ENST00000497700 ZHX1Q9UKY1 873 aaPredicted RBP21.34■■□□□ 1.01
ELL3-208ENST00000497700 CNPY2Q9Y2B0 182 aa21.34■■□□□ 1.01
ELL3-208ENST00000497700 IGKV6D-41A0A0C4DH26 115 aa21.33■■□□□ 1.01
ELL3-208ENST00000497700 RNF113AO15541 343 aaKnown RBP21.33■■□□□ 1.01
ELL3-208ENST00000497700 ADCY6O43306 1168 aa21.33■■□□□ 1.01
ELL3-208ENST00000497700 TDO2P48775 406 aa21.33■■□□□ 1.01
ELL3-208ENST00000497700 KIFC2Q96AC6 838 aa21.33■■□□□ 1.01
ELL3-208ENST00000497700 DDX11Q96FC9 970 aa21.33■■□□□ 1.01
ELL3-208ENST00000497700 CEP95Q96GE4 821 aa21.33■■□□□ 1.01
ELL3-208ENST00000497700 SEC62Q99442 399 aaKnown RBP21.33■■□□□ 1.01
ELL3-208ENST00000497700 SALL3Q9BXA9 1300 aa21.32■■□□□ 1
ELL3-208ENST00000497700 DNAJC25-GNG10A0A024R161 153 aa21.32■■□□□ 1
ELL3-208ENST00000497700 COPB2P35606 906 aa21.32■■□□□ 1
ELL3-208ENST00000497700 OTUD7AQ8TE49 926 aaPredicted RBP21.32■■□□□ 1
ELL3-208ENST00000497700 MYLIPQ8WY64 445 aa21.32■■□□□ 1
ELL3-208ENST00000497700 FGD4Q96M96 766 aa21.32■■□□□ 1
ELL3-208ENST00000497700 SEMA6BQ9H3T3 888 aa21.32■■□□□ 1
ELL3-208ENST00000497700 TACC3Q9Y6A5 838 aa21.32■■□□□ 1
ELL3-208ENST00000497700 CDH23Q9H251 3354 aa21.31■■□□□ 1
ELL3-208ENST00000497700 APPP05067 770 aa21.31■■□□□ 1
ELL3-208ENST00000497700 RAG1P15918 1043 aa21.31■■□□□ 1
ELL3-208ENST00000497700 ACLYP53396 1101 aa21.31■■□□□ 1
ELL3-208ENST00000497700 GIMAP6Q6P9H5 292 aa21.31■■□□□ 1
ELL3-208ENST00000497700 PRPF38AQ8NAV1 312 aaKnown RBP21.31■■□□□ 1
ELL3-208ENST00000497700 RNPC3Q96LT9 517 aaKnown RBP21.31■■□□□ 1
ELL3-208ENST00000497700 PRUNE2Q8WUY3 3088 aa21.3■■□□□ 1
ELL3-208ENST00000497700 KIAA0355O15063 1070 aa21.3■■□□□ 1
ELL3-208ENST00000497700 FAAP100Q0VG06 881 aa21.3■■□□□ 1
ELL3-208ENST00000497700 OSBPL3Q9H4L5 887 aa21.3■■□□□ 1
ELL3-208ENST00000497700 STARD7Q9NQZ5 370 aa21.3■■□□□ 1
ELL3-208ENST00000497700 HOMER2Q9NSB8 354 aa21.3■■□□□ 1
ELL3-208ENST00000497700 TMEM39AQ9NV64 488 aa21.3■■□□□ 1
ELL3-208ENST00000497700 SYNGAP1Q96PV0 1343 aa21.29■■□□□ 1
ELL3-208ENST00000497700 ZBED4O75132 1171 aa21.29■■□□□ 1
ELL3-208ENST00000497700 SMAD3P84022 425 aaKnown RBP21.29■■□□□ 1
ELL3-208ENST00000497700 KCNA10Q16322 511 aa21.29■■□□□ 1
ELL3-208ENST00000497700 ZNF444Q8N0Y2 327 aaPredicted RBP21.29■■□□□ 1
ELL3-208ENST00000497700 KLHDC9Q8NEP7 349 aa21.29■■□□□ 1
ELL3-208ENST00000497700 GPATCH3Q96I76 525 aa21.29■■□□□ 1
ELL3-208ENST00000497700 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.29■■□□□ 1
ELL3-208ENST00000497700 MTMR4Q9NYA4 1195 aa21.29■■□□□ 1
ELL3-208ENST00000497700 FAM184BQ9ULE4 1060 aa21.29■■□□□ 1
ELL3-208ENST00000497700 ISY1Q9ULR0 285 aaKnown RBP21.29■■□□□ 1
ELL3-208ENST00000497700 CTDP1Q9Y5B0 961 aaPredicted RBP21.29■■□□□ 1
ELL3-208ENST00000497700 PDE1AP54750 535 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms