RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 TTLL10Q6ZVT0 673 aa6.2□□□□□ -1.42
CBX3-208ENST00000497498 KIAA0825Q8IV33 1275 aa6.2□□□□□ -1.42
CBX3-208ENST00000497498 TMEM87AQ8NBN3 555 aa6.2□□□□□ -1.42
CBX3-208ENST00000497498 SLC9A7Q96T83 725 aa6.2□□□□□ -1.42
CBX3-208ENST00000497498 SPON2Q9BUD6 331 aa6.2□□□□□ -1.42
CBX3-208ENST00000497498 CHST7Q9NS84 486 aa6.2□□□□□ -1.42
CBX3-208ENST00000497498 PRR13Q9NZ81 148 aa6.2□□□□□ -1.42
CBX3-208ENST00000497498 TNFRSF10DQ9UBN6 386 aa6.2□□□□□ -1.42
CBX3-208ENST00000497498 MINPP1Q9UNW1 487 aa6.2□□□□□ -1.42
CBX3-208ENST00000497498 FKTNO75072 461 aa6.19□□□□□ -1.42
CBX3-208ENST00000497498 TMEM132EQ6IEE7 984 aa6.19□□□□□ -1.42
CBX3-208ENST00000497498 SIRT2Q8IXJ6 389 aa6.19□□□□□ -1.42
CBX3-208ENST00000497498 FCRL2Q96LA5 508 aaPredicted RBP6.19□□□□□ -1.42
CBX3-208ENST00000497498 ZNRF3Q9ULT6 936 aa6.19□□□□□ -1.42
CBX3-208ENST00000497498 PCDHB12Q9Y5F1 795 aa6.19□□□□□ -1.42
CBX3-208ENST00000497498 FADS2P1A8MWK0 482 aa6.18□□□□□ -1.42
CBX3-208ENST00000497498 ACRP10323 421 aa6.18□□□□□ -1.42
CBX3-208ENST00000497498 PNLIPP16233 465 aa6.18□□□□□ -1.42
CBX3-208ENST00000497498 ENDOUP21128 410 aaKnown RBP6.18□□□□□ -1.42
CBX3-208ENST00000497498 BMP8BP34820 402 aa6.18□□□□□ -1.42
CBX3-208ENST00000497498 CTSKP43235 329 aa6.18□□□□□ -1.42
CBX3-208ENST00000497498 RTP1P59025 263 aa6.18□□□□□ -1.42
CBX3-208ENST00000497498 AUHQ13825 339 aaKnown RBP6.18□□□□□ -1.42
CBX3-208ENST00000497498 ADGRF1Q5T601 910 aa6.18□□□□□ -1.42
CBX3-208ENST00000497498 DHRS1Q96LJ7 313 aa6.18□□□□□ -1.42
CBX3-208ENST00000497498 SGPP1Q9BX95 441 aa6.18□□□□□ -1.42
CBX3-208ENST00000497498 MKRN2Q9H000 416 aaKnown RBP6.18□□□□□ -1.42
CBX3-208ENST00000497498 IRF2BPLQ9H1B7 796 aa6.18□□□□□ -1.42
CBX3-208ENST00000497498 GFOD1Q9NXC2 390 aa6.18□□□□□ -1.42
CBX3-208ENST00000497498 SUCOQ9UBS9 1254 aaKnown RBP6.18□□□□□ -1.42
CBX3-208ENST00000497498 ZNF205O95201 554 aa6.17□□□□□ -1.42
CBX3-208ENST00000497498 IMPDH2P12268 514 aa6.17□□□□□ -1.42
CBX3-208ENST00000497498 ZNF76P36508 570 aa6.17□□□□□ -1.42
CBX3-208ENST00000497498 CEBPAP49715 358 aaPredicted RBP6.17□□□□□ -1.42
CBX3-208ENST00000497498 ERVFRD-1P60508 538 aa6.17□□□□□ -1.42
CBX3-208ENST00000497498 YBX1P67809 324 aaKnown RBP6.17□□□□□ -1.42
CBX3-208ENST00000497498 LILRA6Q6PI73 481 aa6.17□□□□□ -1.42
CBX3-208ENST00000497498 TAB3Q8N5C8 712 aaPredicted RBP6.17□□□□□ -1.42
CBX3-208ENST00000497498 PLCD4Q9BRC7 762 aa6.17□□□□□ -1.42
CBX3-208ENST00000497498 BACH2Q9BYV9 841 aa6.17□□□□□ -1.42
CBX3-208ENST00000497498 ERVK13-1Q9NX77 482 aa6.17□□□□□ -1.42
CBX3-208ENST00000497498 MBD1Q9UIS9 605 aaPredicted RBP6.17□□□□□ -1.42
CBX3-208ENST00000497498 FBXL21Q9UKT6 434 aa6.17□□□□□ -1.42
CBX3-208ENST00000497498 SHOXO15266 292 aa6.16□□□□□ -1.42
CBX3-208ENST00000497498 VAV1P15498 845 aa6.16□□□□□ -1.42
CBX3-208ENST00000497498 SRSF3P84103 164 aaKnown RBP6.16□□□□□ -1.42
CBX3-208ENST00000497498 FANCCQ00597 558 aa6.16□□□□□ -1.42
CBX3-208ENST00000497498 HSF5Q4G112 596 aaPredicted RBP6.16□□□□□ -1.42
CBX3-208ENST00000497498 GALNT18Q6P9A2 607 aa6.16□□□□□ -1.42
CBX3-208ENST00000497498 SLCO6A1Q86UG4 719 aa6.16□□□□□ -1.42
CBX3-208ENST00000497498 METTL5Q9NRN9 209 aaKnown RBP6.16□□□□□ -1.42
CBX3-208ENST00000497498 CNOT6Q9ULM6 557 aaKnown RBP6.16□□□□□ -1.42
CBX3-208ENST00000497498 WTIPA6NIX2 430 aaPredicted RBP6.15□□□□□ -1.42
CBX3-208ENST00000497498 C9IYK1 514 aa6.15□□□□□ -1.42
CBX3-208ENST00000497498 ZNF385BQ569K4 471 aa6.15□□□□□ -1.42
CBX3-208ENST00000497498 USP48Q86UV5 1035 aa6.15□□□□□ -1.42
CBX3-208ENST00000497498 C7orf61Q8IZ16 206 aa6.15□□□□□ -1.42
CBX3-208ENST00000497498 TM9SF2Q99805 663 aa6.15□□□□□ -1.42
CBX3-208ENST00000497498 GPR55Q9Y2T6 319 aaPredicted RBP6.15□□□□□ -1.42
CBX3-208ENST00000497498 KCTD3Q9Y597 815 aa6.15□□□□□ -1.42
CBX3-208ENST00000497498 A0A1W2PQ45 241 aaPredicted RBP6.14□□□□□ -1.43
CBX3-208ENST00000497498 A0A1W2PQY0 241 aa6.14□□□□□ -1.43
CBX3-208ENST00000497498 MEIS1O00470 390 aa6.14□□□□□ -1.43
CBX3-208ENST00000497498 ABLIM1O14639 778 aa6.14□□□□□ -1.43
CBX3-208ENST00000497498 GSNP06396 782 aa6.14□□□□□ -1.43
CBX3-208ENST00000497498 INHBBP09529 407 aa6.14□□□□□ -1.43
CBX3-208ENST00000497498 VIPR1P32241 457 aa6.14□□□□□ -1.43
CBX3-208ENST00000497498 PMS1P54277 932 aaKnown RBP6.14□□□□□ -1.43
CBX3-208ENST00000497498 SSPNQ14714 243 aa6.14□□□□□ -1.43
CBX3-208ENST00000497498 KIR3DS1Q14943 382 aa6.14□□□□□ -1.43
CBX3-208ENST00000497498 ANKRD39Q53RE8 183 aa6.14□□□□□ -1.43
CBX3-208ENST00000497498 RTP2Q5QGT7 225 aa6.14□□□□□ -1.43
CBX3-208ENST00000497498 CRTC3Q6UUV7 619 aa6.14□□□□□ -1.43
CBX3-208ENST00000497498 RBBP8NLQ8NC74 664 aaPredicted RBP6.14□□□□□ -1.43
CBX3-208ENST00000497498 TMEM52Q8NDY8 209 aa6.14□□□□□ -1.43
CBX3-208ENST00000497498 SIGLEC10Q96LC7 697 aa6.14□□□□□ -1.43
CBX3-208ENST00000497498 CDADC1Q9BWV3 514 aa6.14□□□□□ -1.43
CBX3-208ENST00000497498 CNTD2Q9H8S5 307 aa6.14□□□□□ -1.43
CBX3-208ENST00000497498 SIRT5Q9NXA8 310 aa6.14□□□□□ -1.43
CBX3-208ENST00000497498 ACSL6Q9UKU0 697 aa6.14□□□□□ -1.43
CBX3-208ENST00000497498 TAF6LQ9Y6J9 622 aa6.14□□□□□ -1.43
CBX3-208ENST00000497498 SDHBP21912 280 aa6.13□□□□□ -1.43
CBX3-208ENST00000497498 LAPTM5Q13571 262 aa6.13□□□□□ -1.43
CBX3-208ENST00000497498 ZNF394Q53GI3 561 aa6.13□□□□□ -1.43
CBX3-208ENST00000497498 OLFML2BQ68BL8 750 aa6.13□□□□□ -1.43
CBX3-208ENST00000497498 SMARCC1Q92922 1105 aaPredicted RBP6.13□□□□□ -1.43
CBX3-208ENST00000497498 SRRTQ9BXP5 876 aaKnown RBP6.13□□□□□ -1.43
CBX3-208ENST00000497498 AP5S1Q9NUS5 200 aa6.13□□□□□ -1.43
CBX3-208ENST00000497498 FAM86C2PA6NEL3 165 aa6.12□□□□□ -1.43
CBX3-208ENST00000497498 RFXAPO00287 272 aa6.12□□□□□ -1.43
CBX3-208ENST00000497498 N4BP3O15049 544 aa6.12□□□□□ -1.43
CBX3-208ENST00000497498 MPOP05164 745 aa6.12□□□□□ -1.43
CBX3-208ENST00000497498 ARL4AP40617 200 aa6.12□□□□□ -1.43
CBX3-208ENST00000497498 EPHB3P54753 998 aa6.12□□□□□ -1.43
CBX3-208ENST00000497498 TMCO4Q5TGY1 634 aa6.12□□□□□ -1.43
CBX3-208ENST00000497498 TCERG1LQ5VWI1 586 aa6.12□□□□□ -1.43
CBX3-208ENST00000497498 PPFIBP1Q86W92 1011 aa6.12□□□□□ -1.43
CBX3-208ENST00000497498 TMEM151BQ8IW70 566 aa6.12□□□□□ -1.43
CBX3-208ENST00000497498 CCDC144CPQ8IYA2 1237 aa6.12□□□□□ -1.43
CBX3-208ENST00000497498 SLC12A9Q9BXP2 914 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms