RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-208ENST00000497368 HDLBPQ00341 1268 aaKnown RBP6.88□□□□□ -1.31
UBE3C-208ENST00000497368 RASGRF1Q13972 1273 aa6.88□□□□□ -1.31
UBE3C-208ENST00000497368 ATP2B3Q16720 1220 aa6.88□□□□□ -1.31
UBE3C-208ENST00000497368 TBCELQ5QJ74 424 aa6.88□□□□□ -1.31
UBE3C-208ENST00000497368 PI16Q6UXB8 463 aa6.88□□□□□ -1.31
UBE3C-208ENST00000497368 OTOP1Q7RTM1 612 aa6.88□□□□□ -1.31
UBE3C-208ENST00000497368 FAM43AQ8N2R8 423 aa6.88□□□□□ -1.31
UBE3C-208ENST00000497368 DDX4Q9NQI0 724 aaKnown RBP6.88□□□□□ -1.31
UBE3C-208ENST00000497368 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.88□□□□□ -1.31
UBE3C-208ENST00000497368 RANBP2P49792 3224 aaKnown RBP6.88□□□□□ -1.31
UBE3C-208ENST00000497368 KIAA0100Q14667 2235 aaKnown RBP6.88□□□□□ -1.31
UBE3C-208ENST00000497368 RLFQ13129 1914 aa6.88□□□□□ -1.31
UBE3C-208ENST00000497368 COL2A1P02458 1487 aaPredicted RBP6.87□□□□□ -1.31
UBE3C-208ENST00000497368 MANSC4A6NHS7 340 aaPredicted RBP6.87□□□□□ -1.31
UBE3C-208ENST00000497368 SFI1A8K8P3 1242 aa6.87□□□□□ -1.31
UBE3C-208ENST00000497368 CT47B1P0C2W7 299 aaPredicted RBP6.87□□□□□ -1.31
UBE3C-208ENST00000497368 UBTFL1P0CB47 393 aaPredicted RBP6.87□□□□□ -1.31
UBE3C-208ENST00000497368 ATP4AP20648 1035 aa6.87□□□□□ -1.31
UBE3C-208ENST00000497368 INPP5BP32019 993 aa6.87□□□□□ -1.31
UBE3C-208ENST00000497368 NF2P35240 595 aa6.87□□□□□ -1.31
UBE3C-208ENST00000497368 EPHA4P54764 986 aa6.87□□□□□ -1.31
UBE3C-208ENST00000497368 MLLT1Q03111 559 aaPredicted RBP6.87□□□□□ -1.31
UBE3C-208ENST00000497368 SREBF2Q12772 1141 aa6.87□□□□□ -1.31
UBE3C-208ENST00000497368 FKBP1CQ5VVH2 108 aa6.87□□□□□ -1.31
UBE3C-208ENST00000497368 CDC42EP5Q6NZY7 148 aa6.87□□□□□ -1.31
UBE3C-208ENST00000497368 FOXR1Q6PIV2 292 aa6.87□□□□□ -1.31
UBE3C-208ENST00000497368 FBXO46Q6PJ61 603 aaPredicted RBP6.87□□□□□ -1.31
UBE3C-208ENST00000497368 HHIPL2Q6UWX4 724 aa6.87□□□□□ -1.31
UBE3C-208ENST00000497368 FAM83AQ86UY5 434 aa6.87□□□□□ -1.31
UBE3C-208ENST00000497368 ANKRD13AQ8IZ07 590 aa6.87□□□□□ -1.31
UBE3C-208ENST00000497368 CD99L2Q8TCZ2 262 aa6.87□□□□□ -1.31
UBE3C-208ENST00000497368 LPIN2Q92539 896 aa6.87□□□□□ -1.31
UBE3C-208ENST00000497368 ZKSCAN4Q969J2 545 aaPredicted RBP6.87□□□□□ -1.31
UBE3C-208ENST00000497368 TEKT1Q969V4 418 aa6.87□□□□□ -1.31
UBE3C-208ENST00000497368 ARHGAP39Q9C0H5 1083 aa6.87□□□□□ -1.31
UBE3C-208ENST00000497368 SCHIP1Q9P0W5 487 aaPredicted RBP6.87□□□□□ -1.31
UBE3C-208ENST00000497368 ZNF112Q9UJU3 913 aa6.87□□□□□ -1.31
UBE3C-208ENST00000497368 GTF3C3Q9Y5Q9 886 aa6.87□□□□□ -1.31
UBE3C-208ENST00000497368 PDS5AQ29RF7 1337 aaKnown RBP6.86□□□□□ -1.31
UBE3C-208ENST00000497368 UNCXA6NJT0 531 aa6.86□□□□□ -1.31
UBE3C-208ENST00000497368 FKTNO75072 461 aa6.86□□□□□ -1.31
UBE3C-208ENST00000497368 WDHD1O75717 1129 aaPredicted RBP6.86□□□□□ -1.31
UBE3C-208ENST00000497368 DKK1O94907 266 aa6.86□□□□□ -1.31
UBE3C-208ENST00000497368 SLC5A1P13866 664 aa6.86□□□□□ -1.31
UBE3C-208ENST00000497368 RASA1P20936 1047 aa6.86□□□□□ -1.31
UBE3C-208ENST00000497368 RBM5P52756 815 aaKnown RBP eCLIP6.86□□□□□ -1.31
UBE3C-208ENST00000497368 RHBDL3P58872 404 aa6.86□□□□□ -1.31
UBE3C-208ENST00000497368 TFCP2Q12800 502 aa6.86□□□□□ -1.31
UBE3C-208ENST00000497368 RRP1BQ14684 758 aaKnown RBP6.86□□□□□ -1.31
UBE3C-208ENST00000497368 PGBD3Q8N328 593 aa6.86□□□□□ -1.31
UBE3C-208ENST00000497368 TMEM57Q8N5G2 664 aa6.86□□□□□ -1.31
UBE3C-208ENST00000497368 WHAMMQ8TF30 809 aa6.86□□□□□ -1.31
UBE3C-208ENST00000497368 TBC1D22AQ8WUA7 517 aa6.86□□□□□ -1.31
UBE3C-208ENST00000497368 MRIQ9BWK5 157 aa6.86□□□□□ -1.31
UBE3C-208ENST00000497368 API5Q9BZZ5 524 aaKnown RBP6.86□□□□□ -1.31
UBE3C-208ENST00000497368 SUGT1Q9Y2Z0 365 aa6.86□□□□□ -1.31
UBE3C-208ENST00000497368 MYH8P13535 1937 aa6.86□□□□□ -1.31
UBE3C-208ENST00000497368 GREB1LQ9C091 1923 aaPredicted RBP6.86□□□□□ -1.31
UBE3C-208ENST00000497368 CCL15-CCL14A0A0B4J2E2 113 aa6.85□□□□□ -1.31
UBE3C-208ENST00000497368 A0A1B0GUL7 405 aa6.85□□□□□ -1.31
UBE3C-208ENST00000497368 PHF20L1A8MW92 1017 aa6.85□□□□□ -1.31
UBE3C-208ENST00000497368 BTBD19C9JJ37 291 aa6.85□□□□□ -1.31
UBE3C-208ENST00000497368 MYO1BO43795 1136 aa6.85□□□□□ -1.31
UBE3C-208ENST00000497368 PPP1R12BO60237 982 aaPredicted RBP6.85□□□□□ -1.31
UBE3C-208ENST00000497368 IFIT1P09914 478 aaKnown RBP6.85□□□□□ -1.31
UBE3C-208ENST00000497368 IL15P40933 162 aaPredicted RBP6.85□□□□□ -1.31
UBE3C-208ENST00000497368 IREB2P48200 963 aaKnown RBP6.85□□□□□ -1.31
UBE3C-208ENST00000497368 TIMM10P62072 90 aa6.85□□□□□ -1.31
UBE3C-208ENST00000497368 FOXK2Q01167 660 aa6.85□□□□□ -1.31
UBE3C-208ENST00000497368 TNFAIP1Q13829 316 aa6.85□□□□□ -1.31
UBE3C-208ENST00000497368 UBAP2LQ14157 1087 aaKnown RBP6.85□□□□□ -1.31
UBE3C-208ENST00000497368 CCL15Q16663 113 aa6.85□□□□□ -1.31
UBE3C-208ENST00000497368 SUPT20HL1Q3ZLR7 823 aa6.85□□□□□ -1.31
UBE3C-208ENST00000497368 NOL9Q5SY16 702 aaKnown RBP6.85□□□□□ -1.31
UBE3C-208ENST00000497368 CCDC84Q86UT8 332 aaPredicted RBP6.85□□□□□ -1.31
UBE3C-208ENST00000497368 SLC9A9Q8IVB4 645 aa6.85□□□□□ -1.31
UBE3C-208ENST00000497368 SIX5Q8N196 739 aa6.85□□□□□ -1.31
UBE3C-208ENST00000497368 TSEN2Q8NCE0 465 aaKnown RBP6.85□□□□□ -1.31
UBE3C-208ENST00000497368 ZDHHC1Q8WTX9 485 aa6.85□□□□□ -1.31
UBE3C-208ENST00000497368 ARHGAP45Q92619 1136 aa6.85□□□□□ -1.31
UBE3C-208ENST00000497368 TRERF1Q96PN7 1200 aa6.85□□□□□ -1.31
UBE3C-208ENST00000497368 WRNIP1Q96S55 665 aa6.85□□□□□ -1.31
UBE3C-208ENST00000497368 HMG20BQ9P0W2 317 aa6.85□□□□□ -1.31
UBE3C-208ENST00000497368 BAZ2AQ9UIF9 1905 aaKnown RBP6.84□□□□□ -1.31
UBE3C-208ENST00000497368 MROH7-TTC4A0A0A0MT08 1334 aa6.84□□□□□ -1.31
UBE3C-208ENST00000497368 MAST3O60307 1309 aa6.84□□□□□ -1.31
UBE3C-208ENST00000497368 LAMA3Q16787 3333 aa6.84□□□□□ -1.31
UBE3C-208ENST00000497368 DDTLA6NHG4 134 aaPredicted RBP6.84□□□□□ -1.31
UBE3C-208ENST00000497368 ARID4AP29374 1257 aaPredicted RBP6.84□□□□□ -1.31
UBE3C-208ENST00000497368 TXLNAP40222 546 aa6.84□□□□□ -1.31
UBE3C-208ENST00000497368 MCAMP43121 646 aa6.84□□□□□ -1.31
UBE3C-208ENST00000497368 MAP3K10Q02779 954 aa6.84□□□□□ -1.31
UBE3C-208ENST00000497368 TCP10Q12799 353 aa6.84□□□□□ -1.31
UBE3C-208ENST00000497368 PPIL2Q13356 520 aa6.84□□□□□ -1.31
UBE3C-208ENST00000497368 SHROOM1Q2M3G4 852 aaPredicted RBP6.84□□□□□ -1.31
UBE3C-208ENST00000497368 CRTC2Q53ET0 693 aaPredicted RBP6.84□□□□□ -1.31
UBE3C-208ENST00000497368 CAVIN4Q5BKX8 364 aa6.84□□□□□ -1.31
UBE3C-208ENST00000497368 EFHC2Q5JST6 749 aa6.84□□□□□ -1.31
UBE3C-208ENST00000497368 ZNF385CQ66K41 422 aaPredicted RBP6.84□□□□□ -1.31
UBE3C-208ENST00000497368 GPAT2Q6NUI2 795 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms