RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 SULF2Q8IWU5 870 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 CYP4X1Q8N118 509 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 CRIPAKQ8N1N5 446 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 ZNF513Q8N8E2 541 aaPredicted RBP3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 ZSCAN1Q8NBB4 408 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 GSTCDQ8NEC7 633 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 WNT8BQ93098 351 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 ATG4CQ96DT6 458 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 EXOC2Q96KP1 924 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 POP1Q99575 1024 aaKnown RBP3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 UBA5Q9GZZ9 404 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 RBSNQ9H1K0 784 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 TCF7L1Q9HCS4 588 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 ST7Q9NRC1 585 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 STRN4Q9NRL3 753 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 ATXN7L1Q9ULK2 861 aaPredicted RBP3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 SPEF1Q9Y4P9 236 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 GJA3Q9Y6H8 435 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 FASNP49327 2511 aaKnown RBP3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 CLIP1P30622 1438 aa3.27□□□□□ -1.89
CKS1BP2-201ENST00000497342 PNPLA7Q6ZV29 1317 aa3.26□□□□□ -1.89
CKS1BP2-201ENST00000497342 WDR33Q9C0J8 1336 aaKnown RBP3.26□□□□□ -1.89
CKS1BP2-201ENST00000497342 DUOX2Q9NRD8 1548 aa3.26□□□□□ -1.89
CKS1BP2-201ENST00000497342 RASSF10A6NK89 507 aa3.26□□□□□ -1.89
CKS1BP2-201ENST00000497342 SLC22A31A6NKX4 558 aa3.26□□□□□ -1.89
CKS1BP2-201ENST00000497342 B2RBV5 119 aa3.26□□□□□ -1.89
CKS1BP2-201ENST00000497342 CAPN5O15484 640 aaPredicted RBP3.26□□□□□ -1.89
CKS1BP2-201ENST00000497342 SIN3BO75182 1162 aa3.26□□□□□ -1.89
CKS1BP2-201ENST00000497342 RFPL1O75677 317 aa3.26□□□□□ -1.89
CKS1BP2-201ENST00000497342 ARAFP10398 606 aa3.26□□□□□ -1.89
CKS1BP2-201ENST00000497342 CAP2P40123 477 aa3.26□□□□□ -1.89
CKS1BP2-201ENST00000497342 KRT85P78386 507 aa3.26□□□□□ -1.89
CKS1BP2-201ENST00000497342 LARP1BQ659C4 914 aaKnown RBP3.26□□□□□ -1.89
CKS1BP2-201ENST00000497342 UNC5AQ6ZN44 842 aa3.26□□□□□ -1.89
CKS1BP2-201ENST00000497342 NLRC3Q7RTR2 1065 aa3.26□□□□□ -1.89
CKS1BP2-201ENST00000497342 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.26□□□□□ -1.89
CKS1BP2-201ENST00000497342 SLFN12Q8IYM2 578 aa3.26□□□□□ -1.89
CKS1BP2-201ENST00000497342 TCEAL8Q8IYN2 117 aa3.26□□□□□ -1.89
CKS1BP2-201ENST00000497342 PPM1KQ8N3J5 372 aa3.26□□□□□ -1.89
CKS1BP2-201ENST00000497342 RIN3Q8TB24 985 aa3.26□□□□□ -1.89
CKS1BP2-201ENST00000497342 DDX1Q92499 740 aaKnown RBP3.26□□□□□ -1.89
CKS1BP2-201ENST00000497342 SLC30A3Q99726 388 aa3.26□□□□□ -1.89
CKS1BP2-201ENST00000497342 DHRS4Q9BTZ2 278 aa3.26□□□□□ -1.89
CKS1BP2-201ENST00000497342 CDH19Q9H159 772 aa3.26□□□□□ -1.89
CKS1BP2-201ENST00000497342 RASSF4Q9H2L5 321 aa3.26□□□□□ -1.89
CKS1BP2-201ENST00000497342 RUBCNLQ9H714 662 aa3.26□□□□□ -1.89
CKS1BP2-201ENST00000497342 ARNT2Q9HBZ2 717 aa3.26□□□□□ -1.89
CKS1BP2-201ENST00000497342 ARHGEF4Q9NR80 690 aa3.26□□□□□ -1.89
CKS1BP2-201ENST00000497342 GABBR1Q9UBS5 961 aa3.26□□□□□ -1.89
CKS1BP2-201ENST00000497342 SUSD2Q9UGT4 822 aa3.26□□□□□ -1.89
CKS1BP2-201ENST00000497342 GPN3Q9UHW5 284 aaPredicted RBP3.26□□□□□ -1.89
CKS1BP2-201ENST00000497342 G3BP2Q9UN86 482 aaKnown RBP3.26□□□□□ -1.89
CKS1BP2-201ENST00000497342 ZDBF2Q9HCK1 2354 aa3.26□□□□□ -1.89
CKS1BP2-201ENST00000497342 LRPPRCP42704 1394 aaKnown RBP3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 TNRC6CQ9HCJ0 1690 aaKnown RBP3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 TTC24A2A3L6 582 aaPredicted RBP3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 SLC35F4A4IF30 521 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 ADARB2-AS1A8MUL3 147 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 H7C1W4 665 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 BNIP3LO60238 219 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 CAND2O75155 1236 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 PEX14O75381 377 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 DDAH1O94760 285 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 GSTP1P09211 210 aaKnown RBP3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 MYCLP1P12525 358 aaPredicted RBP3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 MCM4P33991 863 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 NFKB2Q00653 900 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 MAP3K12Q12852 859 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 DEFB115Q30KQ5 88 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 BBS9Q3SYG4 887 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 MAP9Q49MG5 647 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 ANKRD39Q53RE8 183 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 FOXB2Q5VYV0 432 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 RNF219Q5W0B1 726 aaPredicted RBP3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 OVOS1Q6IE37 1185 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 VHLLQ6RSH7 139 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 RUFY4Q6ZNE9 571 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 KIF18BQ86Y91 864 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 SCUBE1Q8IWY4 988 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 RAVER1Q8IY67 606 aaKnown RBP3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 TRIM22Q8IYM9 498 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 AHI1Q8N157 1196 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 DDX54Q8TDD1 881 aaKnown RBP3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 SMARCC1Q92922 1105 aaPredicted RBP3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 CCDC136Q96JN2 1154 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 CLUHP3Q96NS8 147 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 TRERF1Q96PN7 1200 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 RPS6KC1Q96S38 1066 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 MAF1Q9H063 256 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 TRIM39Q9HCM9 518 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 TCEAL9Q9UHQ7 104 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 DACH1Q9UI36 760 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 MRPS23Q9Y3D9 190 aaKnown RBP3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 PCDHGC5Q9Y5F6 944 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 PAPPAQ13219 1627 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 OVOS2A0A0G2JMS6 1433 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 OVOS2A0A0J9YW53 1432 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 TECPR2O15040 1411 aa3.25□□□□□ -1.89
CKS1BP2-201ENST00000497342 OVOS2Q6IE36 1432 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 198 ms