RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 KCNJ18B7U540 433 aa14.47□□□□□ -0.09
VEGFA-215ENST00000497139 E7EVH7 732 aa14.47□□□□□ -0.09
VEGFA-215ENST00000497139 TACC1O75410 805 aa14.47□□□□□ -0.09
VEGFA-215ENST00000497139 MMP1P03956 469 aa14.47□□□□□ -0.09
VEGFA-215ENST00000497139 GCKP35557 465 aa14.47□□□□□ -0.09
VEGFA-215ENST00000497139 KCNJ12Q14500 433 aa14.47□□□□□ -0.09
VEGFA-215ENST00000497139 NTRK3Q16288 839 aa14.47□□□□□ -0.09
VEGFA-215ENST00000497139 HAUS3Q68CZ6 603 aa14.47□□□□□ -0.09
VEGFA-215ENST00000497139 LRIG3Q6UXM1 1119 aa14.47□□□□□ -0.09
VEGFA-215ENST00000497139 RIC3Q7Z5B4 369 aa14.47□□□□□ -0.09
VEGFA-215ENST00000497139 SH2D3CQ8N5H7 860 aa14.47□□□□□ -0.09
VEGFA-215ENST00000497139 RETREG2Q8NC44 543 aa14.47□□□□□ -0.09
VEGFA-215ENST00000497139 RASSF8Q8NHQ8 419 aa14.47□□□□□ -0.09
VEGFA-215ENST00000497139 WHAMMQ8TF30 809 aa14.47□□□□□ -0.09
VEGFA-215ENST00000497139 PAGE5Q96GU1 130 aa14.47□□□□□ -0.09
VEGFA-215ENST00000497139 SLIT3O75094 1523 aa14.47□□□□□ -0.09
VEGFA-215ENST00000497139 NID2Q14112 1375 aa14.47□□□□□ -0.09
VEGFA-215ENST00000497139 TTC26A0AVF1 554 aa14.47□□□□□ -0.09
VEGFA-215ENST00000497139 GMNCA6NCL1 334 aa14.47□□□□□ -0.09
VEGFA-215ENST00000497139 ZNF185O15231 689 aa14.47□□□□□ -0.09
VEGFA-215ENST00000497139 KIF5AQ12840 1032 aa14.47□□□□□ -0.09
VEGFA-215ENST00000497139 APOA5Q6Q788 366 aa14.47□□□□□ -0.09
VEGFA-215ENST00000497139 NGDNQ8NEJ9 315 aaKnown RBP14.47□□□□□ -0.09
VEGFA-215ENST00000497139 TMEM87BQ96K49 555 aa14.47□□□□□ -0.09
VEGFA-215ENST00000497139 PYM1Q9BRP8 204 aaKnown RBP14.47□□□□□ -0.09
VEGFA-215ENST00000497139 NUP58Q9BVL2 599 aa14.47□□□□□ -0.09
VEGFA-215ENST00000497139 GDF3Q9NR23 364 aa14.47□□□□□ -0.09
VEGFA-215ENST00000497139 CTNND2Q9UQB3 1225 aa14.47□□□□□ -0.09
VEGFA-215ENST00000497139 HYOU1Q9Y4L1 999 aa14.47□□□□□ -0.09
VEGFA-215ENST00000497139 ZNF213O14771 459 aa14.46□□□□□ -0.09
VEGFA-215ENST00000497139 SCTRP47872 440 aa14.46□□□□□ -0.09
VEGFA-215ENST00000497139 UBXN1Q04323 297 aa14.46□□□□□ -0.09
VEGFA-215ENST00000497139 RBBP5Q15291 538 aaKnown RBP14.46□□□□□ -0.09
VEGFA-215ENST00000497139 WDR59Q6PJI9 974 aa14.46□□□□□ -0.09
VEGFA-215ENST00000497139 EIF1ADQ8N9N8 165 aaKnown RBP14.46□□□□□ -0.09
VEGFA-215ENST00000497139 METTL22Q9BUU2 404 aaPredicted RBP14.46□□□□□ -0.09
VEGFA-215ENST00000497139 OSBPL7Q9BZF2 842 aa14.46□□□□□ -0.09
VEGFA-215ENST00000497139 VPS16Q9H269 839 aa14.46□□□□□ -0.09
VEGFA-215ENST00000497139 FMNL1O95466 1100 aaPredicted RBP14.46□□□□□ -0.09
VEGFA-215ENST00000497139 KRT14P02533 472 aa14.46□□□□□ -0.09
VEGFA-215ENST00000497139 FGAP02671 866 aa14.46□□□□□ -0.09
VEGFA-215ENST00000497139 PAEPP09466 180 aa14.46□□□□□ -0.09
VEGFA-215ENST00000497139 CDC25AP30304 524 aa14.46□□□□□ -0.09
VEGFA-215ENST00000497139 PAFAH1B1P43034 410 aa14.46□□□□□ -0.09
VEGFA-215ENST00000497139 SSRP1Q08945 709 aaKnown RBP14.46□□□□□ -0.09
VEGFA-215ENST00000497139 PAK1Q13153 545 aa14.46□□□□□ -0.09
VEGFA-215ENST00000497139 C8orf74Q6P047 294 aa14.46□□□□□ -0.09
VEGFA-215ENST00000497139 HDAC7Q8WUI4 952 aa14.46□□□□□ -0.09
VEGFA-215ENST00000497139 IQCDQ96DY2 449 aa14.46□□□□□ -0.09
VEGFA-215ENST00000497139 CCDC43Q96MW1 224 aaKnown RBP14.46□□□□□ -0.09
VEGFA-215ENST00000497139 HAUS2Q9NVX0 235 aa14.46□□□□□ -0.09
VEGFA-215ENST00000497139 SIPA1L3O60292 1781 aaPredicted RBP14.46□□□□□ -0.1
VEGFA-215ENST00000497139 GOLGA6L10A6NI86 522 aa14.45□□□□□ -0.1
VEGFA-215ENST00000497139 LGALS16A8MUM7 142 aa14.45□□□□□ -0.1
VEGFA-215ENST00000497139 FOXP2O15409 715 aa14.45□□□□□ -0.1
VEGFA-215ENST00000497139 USO1O60763 962 aaKnown RBP14.45□□□□□ -0.1
VEGFA-215ENST00000497139 BMP15O95972 392 aa14.45□□□□□ -0.1
VEGFA-215ENST00000497139 GRIN1Q05586 938 aa14.45□□□□□ -0.1
VEGFA-215ENST00000497139 KCTD16Q68DU8 428 aa14.45□□□□□ -0.1
VEGFA-215ENST00000497139 MB21D1Q8N884 522 aa14.45□□□□□ -0.1
VEGFA-215ENST00000497139 CUL5Q93034 780 aa14.45□□□□□ -0.1
VEGFA-215ENST00000497139 OSBP2Q969R2 916 aa14.45□□□□□ -0.1
VEGFA-215ENST00000497139 SAAL1Q96ER3 474 aa14.45□□□□□ -0.1
VEGFA-215ENST00000497139 TAB2Q9NYJ8 693 aa14.45□□□□□ -0.1
VEGFA-215ENST00000497139 H7C1D1 291 aa14.45□□□□□ -0.1
VEGFA-215ENST00000497139 DNM1LO00429 736 aa14.45□□□□□ -0.1
VEGFA-215ENST00000497139 ZBTB43O43298 467 aa14.45□□□□□ -0.1
VEGFA-215ENST00000497139 TRAPPC3O43617 180 aa14.45□□□□□ -0.1
VEGFA-215ENST00000497139 ATP6V1G2O95670 118 aa14.45□□□□□ -0.1
VEGFA-215ENST00000497139 GSTA1P08263 222 aa14.45□□□□□ -0.1
VEGFA-215ENST00000497139 SGMS1Q86VZ5 419 aa14.45□□□□□ -0.1
VEGFA-215ENST00000497139 CACNA2D3Q8IZS8 1091 aa14.45□□□□□ -0.1
VEGFA-215ENST00000497139 CCDC26Q8TAB7 109 aa14.45□□□□□ -0.1
VEGFA-215ENST00000497139 FAM210AQ96ND0 272 aa14.45□□□□□ -0.1
VEGFA-215ENST00000497139 CSRNP2Q9H175 543 aa14.45□□□□□ -0.1
VEGFA-215ENST00000497139 TSKSQ9UJT2 592 aa14.45□□□□□ -0.1
VEGFA-215ENST00000497139 IFIT1P09914 478 aaKnown RBP14.44□□□□□ -0.1
VEGFA-215ENST00000497139 EEF1GP26641 437 aaKnown RBP14.44□□□□□ -0.1
VEGFA-215ENST00000497139 SEC24CP53992 1094 aa14.44□□□□□ -0.1
VEGFA-215ENST00000497139 EZH2Q15910 746 aaKnown RBP14.44□□□□□ -0.1
VEGFA-215ENST00000497139 CCDC181Q5TID7 509 aa14.44□□□□□ -0.1
VEGFA-215ENST00000497139 ABCC12Q96J65 1359 aa14.44□□□□□ -0.1
VEGFA-215ENST00000497139 NFAT5O94916 1531 aa14.44□□□□□ -0.1
VEGFA-215ENST00000497139 TRAF1Q13077 416 aa14.44□□□□□ -0.1
VEGFA-215ENST00000497139 BIRC3Q13489 604 aa14.44□□□□□ -0.1
VEGFA-215ENST00000497139 MSL1Q68DK7 614 aa14.44□□□□□ -0.1
VEGFA-215ENST00000497139 DIS3L2Q8IYB7 885 aaKnown RBP14.44□□□□□ -0.1
VEGFA-215ENST00000497139 FERMT2Q96AC1 680 aa14.44□□□□□ -0.1
VEGFA-215ENST00000497139 ALS2CR12Q96Q35 445 aa14.44□□□□□ -0.1
VEGFA-215ENST00000497139 OSBPL9Q96SU4 736 aa14.44□□□□□ -0.1
VEGFA-215ENST00000497139 RMND1Q9NWS8 449 aa14.44□□□□□ -0.1
VEGFA-215ENST00000497139 DISP2A7MBM2 1401 aa14.43□□□□□ -0.1
VEGFA-215ENST00000497139 PDS5AQ29RF7 1337 aaKnown RBP14.43□□□□□ -0.1
VEGFA-215ENST00000497139 HAND2P61296 217 aa14.43□□□□□ -0.1
VEGFA-215ENST00000497139 E2F5Q15329 346 aa14.43□□□□□ -0.1
VEGFA-215ENST00000497139 RAB11FIP4Q86YS3 637 aa14.43□□□□□ -0.1
VEGFA-215ENST00000497139 LMBR1Q8WVP7 490 aa14.43□□□□□ -0.1
VEGFA-215ENST00000497139 PHKBQ93100 1093 aa14.43□□□□□ -0.1
VEGFA-215ENST00000497139 LACRTQ9GZZ8 138 aa14.43□□□□□ -0.1
VEGFA-215ENST00000497139 TMBIM4Q9HC24 238 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms