RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 MIGA2Q7L4E1 593 aa7.1□□□□□ -1.27
CACNA1C-229ENST00000496818 TAS1R3Q7RTX0 852 aa7.1□□□□□ -1.27
CACNA1C-229ENST00000496818 DZIP1Q86YF9 867 aaKnown RBP7.1□□□□□ -1.27
CACNA1C-229ENST00000496818 ANKRD44Q8N8A2 993 aa7.1□□□□□ -1.27
CACNA1C-229ENST00000496818 SMCR8Q8TEV9 937 aaPredicted RBP7.1□□□□□ -1.27
CACNA1C-229ENST00000496818 FAM151AQ8WW52 585 aa7.1□□□□□ -1.27
CACNA1C-229ENST00000496818 DPF3Q92784 378 aa7.1□□□□□ -1.27
CACNA1C-229ENST00000496818 VTI1AQ96AJ9 217 aa7.1□□□□□ -1.27
CACNA1C-229ENST00000496818 KAZALD1Q96I82 304 aa7.1□□□□□ -1.27
CACNA1C-229ENST00000496818 INSM2Q96T92 566 aaPredicted RBP7.1□□□□□ -1.27
CACNA1C-229ENST00000496818 SCHIP1Q9P0W5 487 aaPredicted RBP7.1□□□□□ -1.27
CACNA1C-229ENST00000496818 KCNH4Q9UQ05 1017 aa7.1□□□□□ -1.27
CACNA1C-229ENST00000496818 GNEQ9Y223 722 aaKnown RBP7.1□□□□□ -1.27
CACNA1C-229ENST00000496818 DAGLAQ9Y4D2 1042 aa7.1□□□□□ -1.27
CACNA1C-229ENST00000496818 ADGRA2Q96PE1 1338 aa7.09□□□□□ -1.27
CACNA1C-229ENST00000496818 H0YGN5 161 aa7.09□□□□□ -1.27
CACNA1C-229ENST00000496818 EYA2O00167 538 aa7.09□□□□□ -1.27
CACNA1C-229ENST00000496818 FARP2O94887 1054 aaPredicted RBP7.09□□□□□ -1.27
CACNA1C-229ENST00000496818 UBTFL1P0CB47 393 aaPredicted RBP7.09□□□□□ -1.27
CACNA1C-229ENST00000496818 PRDX5P30044 214 aa7.09□□□□□ -1.27
CACNA1C-229ENST00000496818 GJA8P48165 433 aa7.09□□□□□ -1.27
CACNA1C-229ENST00000496818 MFAP1P55081 439 aaKnown RBP7.09□□□□□ -1.27
CACNA1C-229ENST00000496818 PRKCZQ05513 592 aa7.09□□□□□ -1.27
CACNA1C-229ENST00000496818 MTMR3Q13615 1198 aa7.09□□□□□ -1.27
CACNA1C-229ENST00000496818 ATP2B3Q16720 1220 aa7.09□□□□□ -1.27
CACNA1C-229ENST00000496818 C17orf99Q6UX52 265 aa7.09□□□□□ -1.27
CACNA1C-229ENST00000496818 FASTKD5Q7L8L6 764 aaKnown RBP7.09□□□□□ -1.27
CACNA1C-229ENST00000496818 ZSCAN29Q8IWY8 852 aaPredicted RBP7.09□□□□□ -1.27
CACNA1C-229ENST00000496818 SCYL3Q8IZE3 742 aa7.09□□□□□ -1.27
CACNA1C-229ENST00000496818 MEIOBQ8N635 442 aa7.09□□□□□ -1.27
CACNA1C-229ENST00000496818 KLHDC4Q8TBB5 520 aa7.09□□□□□ -1.27
CACNA1C-229ENST00000496818 GTF3C2Q8WUA4 911 aaPredicted RBP7.09□□□□□ -1.27
CACNA1C-229ENST00000496818 SHISA4Q96DD7 197 aa7.09□□□□□ -1.27
CACNA1C-229ENST00000496818 RNF208Q9H0X6 261 aa7.09□□□□□ -1.27
CACNA1C-229ENST00000496818 POLMQ9NP87 494 aaPredicted RBP7.09□□□□□ -1.27
CACNA1C-229ENST00000496818 DENND2AQ9ULE3 1009 aa7.09□□□□□ -1.27
CACNA1C-229ENST00000496818 HDAC5Q9UQL6 1122 aa7.09□□□□□ -1.27
CACNA1C-229ENST00000496818 NR2E3Q9Y5X4 410 aa7.09□□□□□ -1.27
CACNA1C-229ENST00000496818 SALL1Q9NSC2 1324 aa7.08□□□□□ -1.28
CACNA1C-229ENST00000496818 POLR2AP24928 1970 aaKnown RBP7.08□□□□□ -1.28
CACNA1C-229ENST00000496818 E9PSI1 815 aa7.08□□□□□ -1.28
CACNA1C-229ENST00000496818 TNPO2O14787 897 aaKnown RBP7.08□□□□□ -1.28
CACNA1C-229ENST00000496818 CIAO1O76071 339 aa7.08□□□□□ -1.28
CACNA1C-229ENST00000496818 GJB1P08034 283 aa7.08□□□□□ -1.28
CACNA1C-229ENST00000496818 BMP2P12643 396 aa7.08□□□□□ -1.28
CACNA1C-229ENST00000496818 CCL5P13501 91 aa7.08□□□□□ -1.28
CACNA1C-229ENST00000496818 CAPN2P17655 700 aa7.08□□□□□ -1.28
CACNA1C-229ENST00000496818 FGFR2P21802 821 aa7.08□□□□□ -1.28
CACNA1C-229ENST00000496818 FOXK2Q01167 660 aa7.08□□□□□ -1.28
CACNA1C-229ENST00000496818 NFIAQ12857 509 aa7.08□□□□□ -1.28
CACNA1C-229ENST00000496818 MTFR1Q15390 333 aa7.08□□□□□ -1.28
CACNA1C-229ENST00000496818 SH3PXD2AQ5TCZ1 1133 aa7.08□□□□□ -1.28
CACNA1C-229ENST00000496818 TMEM214Q6NUQ4 689 aaKnown RBP7.08□□□□□ -1.28
CACNA1C-229ENST00000496818 CDC42EP5Q6NZY7 148 aa7.08□□□□□ -1.28
CACNA1C-229ENST00000496818 C1orf216Q8TAB5 229 aa7.08□□□□□ -1.28
CACNA1C-229ENST00000496818 ZSCAN10Q96SZ4 725 aaPredicted RBP7.08□□□□□ -1.28
CACNA1C-229ENST00000496818 SMC4Q9NTJ3 1288 aa7.08□□□□□ -1.28
CACNA1C-229ENST00000496818 USP40Q9NVE5 1235 aa7.08□□□□□ -1.28
CACNA1C-229ENST00000496818 ZNF232Q9UNY5 417 aa7.08□□□□□ -1.28
CACNA1C-229ENST00000496818 MTMR7Q9Y216 660 aa7.08□□□□□ -1.28
CACNA1C-229ENST00000496818 HRH3Q9Y5N1 445 aa7.08□□□□□ -1.28
CACNA1C-229ENST00000496818 LRRFIP2Q9Y608 721 aaKnown RBP7.08□□□□□ -1.28
CACNA1C-229ENST00000496818 A0A0G2JLL6 359 aaPredicted RBP7.07□□□□□ -1.28
CACNA1C-229ENST00000496818 CDK2AP1O14519 115 aa7.07□□□□□ -1.28
CACNA1C-229ENST00000496818 CXCL11O14625 94 aa7.07□□□□□ -1.28
CACNA1C-229ENST00000496818 ENTPD3O75355 529 aa7.07□□□□□ -1.28
CACNA1C-229ENST00000496818 UPP2O95045 317 aa7.07□□□□□ -1.28
CACNA1C-229ENST00000496818 CYP2C8P10632 490 aa7.07□□□□□ -1.28
CACNA1C-229ENST00000496818 IL15P40933 162 aaPredicted RBP7.07□□□□□ -1.28
CACNA1C-229ENST00000496818 CTSOP43234 321 aaPredicted RBP7.07□□□□□ -1.28
CACNA1C-229ENST00000496818 IRX6P78412 446 aaPredicted RBP7.07□□□□□ -1.28
CACNA1C-229ENST00000496818 GADL1Q6ZQY3 521 aa7.07□□□□□ -1.28
CACNA1C-229ENST00000496818 SND1Q7KZF4 910 aaKnown RBP eCLIP7.07□□□□□ -1.28
CACNA1C-229ENST00000496818 PRRT2Q7Z6L0 340 aaPredicted RBP7.07□□□□□ -1.28
CACNA1C-229ENST00000496818 LINC00528Q8N1L1 170 aa7.07□□□□□ -1.28
CACNA1C-229ENST00000496818 U2AF1L4Q8WU68 220 aaKnown RBP7.07□□□□□ -1.28
CACNA1C-229ENST00000496818 COA7Q96BR5 231 aa7.07□□□□□ -1.28
CACNA1C-229ENST00000496818 TSEN34Q9BSV6 310 aaKnown RBP7.07□□□□□ -1.28
CACNA1C-229ENST00000496818 SIL1Q9H173 461 aa7.07□□□□□ -1.28
CACNA1C-229ENST00000496818 ZNF112Q9UJU3 913 aa7.07□□□□□ -1.28
CACNA1C-229ENST00000496818 SLC45A1Q9Y2W3 748 aa7.07□□□□□ -1.28
CACNA1C-229ENST00000496818 HCN4Q9Y3Q4 1203 aa7.07□□□□□ -1.28
CACNA1C-229ENST00000496818 RFX7Q2KHR2 1363 aa7.07□□□□□ -1.28
CACNA1C-229ENST00000496818 GAKO14976 1311 aa7.06□□□□□ -1.28
CACNA1C-229ENST00000496818 PDS5AQ29RF7 1337 aaKnown RBP7.06□□□□□ -1.28
CACNA1C-229ENST00000496818 TNRC18O15417 2968 aaPredicted RBP7.06□□□□□ -1.28
CACNA1C-229ENST00000496818 A0A1W2PPC1 479 aa7.06□□□□□ -1.28
CACNA1C-229ENST00000496818 SOWAHDA6NJG2 315 aa7.06□□□□□ -1.28
CACNA1C-229ENST00000496818 TRIM75PA6NK02 468 aa7.06□□□□□ -1.28
CACNA1C-229ENST00000496818 H3BRB1 525 aa7.06□□□□□ -1.28
CACNA1C-229ENST00000496818 GFRA3O60609 400 aa7.06□□□□□ -1.28
CACNA1C-229ENST00000496818 BCRP11274 1271 aa7.06□□□□□ -1.28
CACNA1C-229ENST00000496818 BMP1P13497 986 aa7.06□□□□□ -1.28
CACNA1C-229ENST00000496818 PTPRAP18433 802 aa7.06□□□□□ -1.28
CACNA1C-229ENST00000496818 CTGFP29279 349 aa7.06□□□□□ -1.28
CACNA1C-229ENST00000496818 BTDP43251 543 aa7.06□□□□□ -1.28
CACNA1C-229ENST00000496818 PHKA2P46019 1235 aa7.06□□□□□ -1.28
CACNA1C-229ENST00000496818 RGS3P49796 1198 aa7.06□□□□□ -1.28
CACNA1C-229ENST00000496818 PABPC4Q13310 644 aaKnown RBP eCLIP7.06□□□□□ -1.28
CACNA1C-229ENST00000496818 PICALMQ13492 652 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms