RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 CACNB2Q08289 660 aaPredicted RBP24.34■■□□□ 1.49
COL9A2-211ENST00000496215 PRPF38BQ5VTL8 546 aaKnown RBP24.34■■□□□ 1.49
COL9A2-211ENST00000496215 RIOX2Q8IUF8 465 aa24.34■■□□□ 1.49
COL9A2-211ENST00000496215 TEX13BQ9BXU2 312 aa24.34■■□□□ 1.49
COL9A2-211ENST00000496215 TCP11L1Q9NUJ3 509 aa24.34■■□□□ 1.49
COL9A2-211ENST00000496215 RPTORQ8N122 1335 aa24.34■■□□□ 1.49
COL9A2-211ENST00000496215 NEFLP07196 543 aa24.33■■□□□ 1.49
COL9A2-211ENST00000496215 HOXC6P09630 235 aa24.33■■□□□ 1.49
COL9A2-211ENST00000496215 STAT3P40763 770 aa24.33■■□□□ 1.49
COL9A2-211ENST00000496215 IKQ13123 557 aaPredicted RBP24.33■■□□□ 1.49
COL9A2-211ENST00000496215 RASGRP2Q7LDG7 609 aa24.33■■□□□ 1.49
COL9A2-211ENST00000496215 HMX1Q9NP08 348 aaPredicted RBP24.33■■□□□ 1.49
COL9A2-211ENST00000496215 ZNFX1Q9P2E3 1918 aaKnown RBP24.32■■□□□ 1.48
COL9A2-211ENST00000496215 TMEM232C9JQI7 657 aa24.32■■□□□ 1.48
COL9A2-211ENST00000496215 ZBED4O75132 1171 aa24.32■■□□□ 1.48
COL9A2-211ENST00000496215 TOP1P11387 765 aaKnown RBP24.32■■□□□ 1.48
COL9A2-211ENST00000496215 MCCP23508 829 aa24.32■■□□□ 1.48
COL9A2-211ENST00000496215 SNRNP48Q6IEG0 339 aaKnown RBP24.32■■□□□ 1.48
COL9A2-211ENST00000496215 DPP9Q86TI2 863 aa24.32■■□□□ 1.48
COL9A2-211ENST00000496215 FAM160B2Q86V87 743 aa24.32■■□□□ 1.48
COL9A2-211ENST00000496215 ABRAQ8N0Z2 381 aa24.32■■□□□ 1.48
COL9A2-211ENST00000496215 CHMP4CQ96CF2 233 aa24.32■■□□□ 1.48
COL9A2-211ENST00000496215 MTMR7Q9Y216 660 aa24.32■■□□□ 1.48
COL9A2-211ENST00000496215 COBLO75128 1261 aa24.31■■□□□ 1.48
COL9A2-211ENST00000496215 FCER1AP12319 257 aa24.31■■□□□ 1.48
COL9A2-211ENST00000496215 CCND3P30281 292 aaPredicted RBP24.31■■□□□ 1.48
COL9A2-211ENST00000496215 DCAF4Q8WV16 495 aa24.31■■□□□ 1.48
COL9A2-211ENST00000496215 CCDC136Q96JN2 1154 aa24.31■■□□□ 1.48
COL9A2-211ENST00000496215 SLC38A10Q9HBR0 1119 aa24.31■■□□□ 1.48
COL9A2-211ENST00000496215 SLC5A4Q9NY91 659 aa24.31■■□□□ 1.48
COL9A2-211ENST00000496215 PLXNA1Q9UIW2 1896 aa24.31■■□□□ 1.48
COL9A2-211ENST00000496215 ALPK3Q96L96 1907 aa24.31■■□□□ 1.48
COL9A2-211ENST00000496215 SGSM2O43147 1006 aa24.3■■□□□ 1.48
COL9A2-211ENST00000496215 FARP2O94887 1054 aaPredicted RBP24.3■■□□□ 1.48
COL9A2-211ENST00000496215 MNX1P50219 401 aaPredicted RBP24.3■■□□□ 1.48
COL9A2-211ENST00000496215 CCDC96Q2M329 555 aa24.3■■□□□ 1.48
COL9A2-211ENST00000496215 MFSD14CQ5VZR4 134 aa24.3■■□□□ 1.48
COL9A2-211ENST00000496215 KCTD1Q719H9 257 aa24.3■■□□□ 1.48
COL9A2-211ENST00000496215 DIS3LQ8TF46 1054 aaKnown RBP24.3■■□□□ 1.48
COL9A2-211ENST00000496215 CHURC1Q8WUH1 139 aa24.3■■□□□ 1.48
COL9A2-211ENST00000496215 MMP19Q99542 508 aa24.3■■□□□ 1.48
COL9A2-211ENST00000496215 TMEM47Q9BQJ4 181 aa24.3■■□□□ 1.48
COL9A2-211ENST00000496215 CNNM2Q9H8M5 875 aa24.3■■□□□ 1.48
COL9A2-211ENST00000496215 CEP290O15078 2479 aa24.29■■□□□ 1.48
COL9A2-211ENST00000496215 ATP2A1O14983 1001 aa24.29■■□□□ 1.48
COL9A2-211ENST00000496215 KDM4AO75164 1064 aa24.29■■□□□ 1.48
COL9A2-211ENST00000496215 FDX1P10109 184 aa24.29■■□□□ 1.48
COL9A2-211ENST00000496215 CAPN2P17655 700 aa24.29■■□□□ 1.48
COL9A2-211ENST00000496215 KCTD2Q14681 263 aa24.29■■□□□ 1.48
COL9A2-211ENST00000496215 IQCA1Q86XH1 822 aa24.29■■□□□ 1.48
COL9A2-211ENST00000496215 CPXCR1Q8N123 301 aa24.29■■□□□ 1.48
COL9A2-211ENST00000496215 B4E1Z4 1266 aa24.28■■□□□ 1.48
COL9A2-211ENST00000496215 TFRCP02786 760 aaKnown RBP24.28■■□□□ 1.48
COL9A2-211ENST00000496215 OAZ1P54368 228 aa24.28■■□□□ 1.48
COL9A2-211ENST00000496215 RCSD1Q6JBY9 416 aa24.28■■□□□ 1.48
COL9A2-211ENST00000496215 SKAP1Q86WV1 359 aa24.28■■□□□ 1.48
COL9A2-211ENST00000496215 TTC14Q96N46 770 aa24.28■■□□□ 1.48
COL9A2-211ENST00000496215 ZKSCAN3Q9BRR0 538 aa24.28■■□□□ 1.48
COL9A2-211ENST00000496215 KRT23Q9C075 422 aa24.28■■□□□ 1.48
COL9A2-211ENST00000496215 PLA2G6O60733 806 aa24.27■■□□□ 1.48
COL9A2-211ENST00000496215 CYP2C19P33261 490 aa24.27■■□□□ 1.48
COL9A2-211ENST00000496215 CCDC178Q5BJE1 867 aa24.27■■□□□ 1.48
COL9A2-211ENST00000496215 BMP2KLQ5H9B9 411 aa24.27■■□□□ 1.48
COL9A2-211ENST00000496215 OLFML2BQ68BL8 750 aa24.27■■□□□ 1.48
COL9A2-211ENST00000496215 TRPV1Q8NER1 839 aa24.27■■□□□ 1.48
COL9A2-211ENST00000496215 RAVER2Q9HCJ3 691 aaKnown RBP24.27■■□□□ 1.48
COL9A2-211ENST00000496215 RIPK3Q9Y572 518 aa24.27■■□□□ 1.48
COL9A2-211ENST00000496215 U3KPZ7 1027 aaPredicted RBP24.27■■□□□ 1.48
COL9A2-211ENST00000496215 SLC4A3P48751 1232 aa24.26■■□□□ 1.47
COL9A2-211ENST00000496215 PTH1RQ03431 593 aa24.26■■□□□ 1.47
COL9A2-211ENST00000496215 LHX8Q68G74 356 aa24.26■■□□□ 1.47
COL9A2-211ENST00000496215 DGKHQ86XP1 1220 aa24.25■■□□□ 1.47
COL9A2-211ENST00000496215 OGDHLQ9ULD0 1010 aa24.25■■□□□ 1.47
COL9A2-211ENST00000496215 PGK2P07205 417 aa24.24■■□□□ 1.47
COL9A2-211ENST00000496215 PDHBP11177 359 aa24.24■■□□□ 1.47
COL9A2-211ENST00000496215 PAWRQ96IZ0 340 aaKnown RBP24.24■■□□□ 1.47
COL9A2-211ENST00000496215 MAML3Q96JK9 1138 aa24.24■■□□□ 1.47
COL9A2-211ENST00000496215 ZSCAN10Q96SZ4 725 aaPredicted RBP24.24■■□□□ 1.47
COL9A2-211ENST00000496215 UBAC1Q9BSL1 405 aa24.24■■□□□ 1.47
COL9A2-211ENST00000496215 FBXO40Q9UH90 709 aa24.24■■□□□ 1.47
COL9A2-211ENST00000496215 PRR12Q9ULL5 1215 aa24.24■■□□□ 1.47
COL9A2-211ENST00000496215 TNKSO95271 1327 aa24.24■■□□□ 1.47
COL9A2-211ENST00000496215 FRMPD2Q68DX3 1309 aaPredicted RBP24.24■■□□□ 1.47
COL9A2-211ENST00000496215 CYP21A2P08686 494 aa24.23■■□□□ 1.47
COL9A2-211ENST00000496215 CYBAP13498 195 aa24.23■■□□□ 1.47
COL9A2-211ENST00000496215 TRDNQ13061 729 aa24.23■■□□□ 1.47
COL9A2-211ENST00000496215 ANKLE1Q8NAG6 615 aa24.23■■□□□ 1.47
COL9A2-211ENST00000496215 KAT14Q9H8E8 782 aa24.23■■□□□ 1.47
COL9A2-211ENST00000496215 DNAH12Q6ZR08 3092 aa24.22■■□□□ 1.47
COL9A2-211ENST00000496215 CCDC174Q6PII3 467 aa24.22■■□□□ 1.47
COL9A2-211ENST00000496215 KIAA1211Q6ZU35 1233 aa24.22■■□□□ 1.47
COL9A2-211ENST00000496215 ENAHQ8N8S7 591 aaPredicted RBP24.22■■□□□ 1.47
COL9A2-211ENST00000496215 PNMA1Q8ND90 353 aa24.22■■□□□ 1.47
COL9A2-211ENST00000496215 CHST13Q8NET6 341 aa24.22■■□□□ 1.47
COL9A2-211ENST00000496215 ESYT1Q9BSJ8 1104 aa24.22■■□□□ 1.47
COL9A2-211ENST00000496215 HOMER2Q9NSB8 354 aa24.22■■□□□ 1.47
COL9A2-211ENST00000496215 ZSWIM5Q9P217 1185 aa24.22■■□□□ 1.47
COL9A2-211ENST00000496215 RANBP2P49792 3224 aaKnown RBP24.21■■□□□ 1.47
COL9A2-211ENST00000496215 ZNF536O15090 1300 aa24.21■■□□□ 1.47
COL9A2-211ENST00000496215 SNHG28P0DPA3 235 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms