RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 PLAAQ9Y263 795 aa7.78□□□□□ -1.16
SSR3-208ENST00000496050 DNAJC25-GNG10A0A024R161 153 aa7.77□□□□□ -1.17
SSR3-208ENST00000496050 FAM155AB1AL88 458 aaPredicted RBP7.77□□□□□ -1.17
SSR3-208ENST00000496050 CAPNS1P04632 268 aa7.77□□□□□ -1.17
SSR3-208ENST00000496050 ZNF865P0CJ78 1059 aaPredicted RBP7.77□□□□□ -1.17
SSR3-208ENST00000496050 PABPC1P11940 636 aaKnown RBP7.77□□□□□ -1.17
SSR3-208ENST00000496050 POU4F1Q01851 419 aa7.77□□□□□ -1.17
SSR3-208ENST00000496050 NMIQ13287 307 aaPredicted RBP7.77□□□□□ -1.17
SSR3-208ENST00000496050 GRB10Q13322 594 aa7.77□□□□□ -1.17
SSR3-208ENST00000496050 PTPROQ16827 1216 aa7.77□□□□□ -1.17
SSR3-208ENST00000496050 TKFCQ3LXA3 575 aa7.77□□□□□ -1.17
SSR3-208ENST00000496050 CWF19L1Q69YN2 538 aaKnown RBP7.77□□□□□ -1.17
SSR3-208ENST00000496050 ARHGAP27Q6ZUM4 889 aa7.77□□□□□ -1.17
SSR3-208ENST00000496050 MFSD14AQ96MC6 490 aa7.77□□□□□ -1.17
SSR3-208ENST00000496050 ATG3Q9NT62 314 aa7.77□□□□□ -1.17
SSR3-208ENST00000496050 MRPS23Q9Y3D9 190 aaKnown RBP7.77□□□□□ -1.17
SSR3-208ENST00000496050 CD2APQ9Y5K6 639 aa7.77□□□□□ -1.17
SSR3-208ENST00000496050 FAM170BA6NMN3 283 aa7.76□□□□□ -1.17
SSR3-208ENST00000496050 PLD2O14939 933 aa7.76□□□□□ -1.17
SSR3-208ENST00000496050 RFPL3O75679 317 aa7.76□□□□□ -1.17
SSR3-208ENST00000496050 ITIH2P19823 946 aa7.76□□□□□ -1.17
SSR3-208ENST00000496050 NOP2P46087 812 aaKnown RBP7.76□□□□□ -1.17
SSR3-208ENST00000496050 SUMO1P63165 101 aaKnown RBP7.76□□□□□ -1.17
SSR3-208ENST00000496050 AMPD2Q01433 879 aa7.76□□□□□ -1.17
SSR3-208ENST00000496050 FNDC3BQ53EP0 1204 aaKnown RBP7.76□□□□□ -1.17
SSR3-208ENST00000496050 YOD1Q5VVQ6 348 aaPredicted RBP7.76□□□□□ -1.17
SSR3-208ENST00000496050 GTF2IRD2BQ6EKJ0 949 aa7.76□□□□□ -1.17
SSR3-208ENST00000496050 GPAT2Q6NUI2 795 aa7.76□□□□□ -1.17
SSR3-208ENST00000496050 ZNF765Q7L2R6 523 aa7.76□□□□□ -1.17
SSR3-208ENST00000496050 TMC3Q7Z5M5 1100 aa7.76□□□□□ -1.17
SSR3-208ENST00000496050 GTF2IRD2Q86UP8 949 aa7.76□□□□□ -1.17
SSR3-208ENST00000496050 MFSD4AQ8N468 514 aa7.76□□□□□ -1.17
SSR3-208ENST00000496050 DAGLBQ8NCG7 672 aa7.76□□□□□ -1.17
SSR3-208ENST00000496050 EXOC2Q96KP1 924 aa7.76□□□□□ -1.17
SSR3-208ENST00000496050 IER2Q9BTL4 223 aa7.76□□□□□ -1.17
SSR3-208ENST00000496050 METTL22Q9BUU2 404 aaPredicted RBP7.76□□□□□ -1.17
SSR3-208ENST00000496050 LGR4Q9BXB1 951 aa7.76□□□□□ -1.17
SSR3-208ENST00000496050 BRINP2Q9C0B6 783 aa7.76□□□□□ -1.17
SSR3-208ENST00000496050 CYP26B1Q9NR63 512 aa7.76□□□□□ -1.17
SSR3-208ENST00000496050 GSC2O15499 205 aa7.75□□□□□ -1.17
SSR3-208ENST00000496050 CPP00450 1065 aa7.75□□□□□ -1.17
SSR3-208ENST00000496050 GSNP06396 782 aa7.75□□□□□ -1.17
SSR3-208ENST00000496050 GRIA2P42262 883 aa7.75□□□□□ -1.17
SSR3-208ENST00000496050 MASP1P48740 699 aa7.75□□□□□ -1.17
SSR3-208ENST00000496050 TNK2Q07912 1038 aa7.75□□□□□ -1.17
SSR3-208ENST00000496050 KCNMA1Q12791 1236 aa7.75□□□□□ -1.17
SSR3-208ENST00000496050 DALRD3Q5D0E6 543 aaKnown RBP7.75□□□□□ -1.17
SSR3-208ENST00000496050 ZNF655Q8N720 491 aaPredicted RBP7.75□□□□□ -1.17
SSR3-208ENST00000496050 KCTD13Q8WZ19 329 aa7.75□□□□□ -1.17
SSR3-208ENST00000496050 NINJ1Q92982 152 aa7.75□□□□□ -1.17
SSR3-208ENST00000496050 OSBP2Q969R2 916 aa7.75□□□□□ -1.17
SSR3-208ENST00000496050 ZDHHC15Q96MV8 337 aa7.75□□□□□ -1.17
SSR3-208ENST00000496050 GPR62Q9BZJ7 368 aa7.75□□□□□ -1.17
SSR3-208ENST00000496050 TRIT1Q9H3H1 467 aaKnown RBP7.75□□□□□ -1.17
SSR3-208ENST00000496050 MKNK2Q9HBH9 465 aa7.75□□□□□ -1.17
SSR3-208ENST00000496050 GPATCH2Q9NW75 528 aa7.75□□□□□ -1.17
SSR3-208ENST00000496050 CAPN6Q9Y6Q1 641 aa7.75□□□□□ -1.17
SSR3-208ENST00000496050 PRR33A8MZF0 331 aa7.74□□□□□ -1.17
SSR3-208ENST00000496050 TBX1O43435 398 aa7.74□□□□□ -1.17
SSR3-208ENST00000496050 VAMP4O75379 141 aa7.74□□□□□ -1.17
SSR3-208ENST00000496050 PRAMEF1O95521 474 aa7.74□□□□□ -1.17
SSR3-208ENST00000496050 F13BP05160 661 aa7.74□□□□□ -1.17
SSR3-208ENST00000496050 KCNJ6P48051 423 aa7.74□□□□□ -1.17
SSR3-208ENST00000496050 IGBP1P78318 339 aa7.74□□□□□ -1.17
SSR3-208ENST00000496050 RASSF7Q02833 373 aa7.74□□□□□ -1.17
SSR3-208ENST00000496050 NFIAQ12857 509 aa7.74□□□□□ -1.17
SSR3-208ENST00000496050 C21orf62-AS1Q17RA5 79 aa7.74□□□□□ -1.17
SSR3-208ENST00000496050 SLC51AQ86UW1 340 aa7.74□□□□□ -1.17
SSR3-208ENST00000496050 BTN2A2Q8WVV5 523 aa7.74□□□□□ -1.17
SSR3-208ENST00000496050 DBNDD2Q9BQY9 259 aa7.74□□□□□ -1.17
SSR3-208ENST00000496050 OSBPL1AQ9BXW6 950 aa7.74□□□□□ -1.17
SSR3-208ENST00000496050 MRPL4Q9BYD3 311 aaKnown RBP7.74□□□□□ -1.17
SSR3-208ENST00000496050 NKX2-4Q9H2Z4 354 aa7.74□□□□□ -1.17
SSR3-208ENST00000496050 NCOA5Q9HCD5 579 aaKnown RBP7.74□□□□□ -1.17
SSR3-208ENST00000496050 WDR64B1ANS9 1081 aa7.73□□□□□ -1.17
SSR3-208ENST00000496050 PABPC4Q13310 644 aaKnown RBP eCLIP7.73□□□□□ -1.17
SSR3-208ENST00000496050 CBX2Q14781 532 aaPredicted RBP7.73□□□□□ -1.17
SSR3-208ENST00000496050 SHISA5Q8N114 240 aa7.73□□□□□ -1.17
SSR3-208ENST00000496050 DUSP15Q9H1R2 295 aaPredicted RBP7.73□□□□□ -1.17
SSR3-208ENST00000496050 hCG_2014768A0A024R1R8 64 aa7.72□□□□□ -1.17
SSR3-208ENST00000496050 MEIS1O00470 390 aa7.72□□□□□ -1.17
SSR3-208ENST00000496050 DLX3O60479 287 aa7.72□□□□□ -1.17
SSR3-208ENST00000496050 RAPGEF3O95398 923 aa7.72□□□□□ -1.17
SSR3-208ENST00000496050 SNRPB2P08579 225 aaKnown RBP7.72□□□□□ -1.17
SSR3-208ENST00000496050 SRFP11831 508 aa7.72□□□□□ -1.17
SSR3-208ENST00000496050 ANAPC15P60006 121 aa7.72□□□□□ -1.17
SSR3-208ENST00000496050 MAP4K2Q12851 820 aa7.72□□□□□ -1.17
SSR3-208ENST00000496050 CPSF6Q16630 551 aaKnown RBP eCLIP7.72□□□□□ -1.17
SSR3-208ENST00000496050 DPY19L1Q2PZI1 675 aa7.72□□□□□ -1.17
SSR3-208ENST00000496050 DHX37Q8IY37 1157 aaKnown RBP7.72□□□□□ -1.17
SSR3-208ENST00000496050 NIM1KQ8IY84 436 aa7.72□□□□□ -1.17
SSR3-208ENST00000496050 TPSG1Q9NRR2 321 aa7.72□□□□□ -1.17
SSR3-208ENST00000496050 RNF112Q9ULX5 631 aa7.72□□□□□ -1.17
SSR3-208ENST00000496050 GPR55Q9Y2T6 319 aaPredicted RBP7.72□□□□□ -1.17
SSR3-208ENST00000496050 NOP58Q9Y2X3 529 aaKnown RBP7.72□□□□□ -1.17
SSR3-208ENST00000496050 H0Y8X5 98 aa7.71□□□□□ -1.18
SSR3-208ENST00000496050 IGLV1-40P01703 118 aa7.71□□□□□ -1.18
SSR3-208ENST00000496050 SCG5P05408 212 aa7.71□□□□□ -1.18
SSR3-208ENST00000496050 H2AFB1P0C5Y9 115 aa7.71□□□□□ -1.18
SSR3-208ENST00000496050 H2AFB2P0C5Z0 115 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms