RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 LDHCP07864 332 aa11.86□□□□□ -0.51
SMARCAL1-213ENST00000496037 ATP2A2P16615 1042 aaKnown RBP11.86□□□□□ -0.51
SMARCAL1-213ENST00000496037 ERCC3P19447 782 aa11.86□□□□□ -0.51
SMARCAL1-213ENST00000496037 CYP2C18P33260 490 aa11.86□□□□□ -0.51
SMARCAL1-213ENST00000496037 SHROOM1Q2M3G4 852 aaPredicted RBP11.86□□□□□ -0.51
SMARCAL1-213ENST00000496037 TMEM67Q5HYA8 995 aa11.86□□□□□ -0.51
SMARCAL1-213ENST00000496037 FAM178BQ8IXR5 827 aa11.86□□□□□ -0.51
SMARCAL1-213ENST00000496037 CCDC82Q8N4S0 544 aa11.86□□□□□ -0.51
SMARCAL1-213ENST00000496037 SHCBP1Q8NEM2 672 aa11.86□□□□□ -0.51
SMARCAL1-213ENST00000496037 VTI1AQ96AJ9 217 aa11.86□□□□□ -0.51
SMARCAL1-213ENST00000496037 LENG1Q96BZ8 264 aaPredicted RBP11.86□□□□□ -0.51
SMARCAL1-213ENST00000496037 PHOX2BQ99453 314 aa11.86□□□□□ -0.51
SMARCAL1-213ENST00000496037 NOL10Q9BSC4 688 aaKnown RBP11.86□□□□□ -0.51
SMARCAL1-213ENST00000496037 KDM4CQ9H3R0 1056 aa11.86□□□□□ -0.51
SMARCAL1-213ENST00000496037 ELP1O95163 1332 aa11.86□□□□□ -0.51
SMARCAL1-213ENST00000496037 PDS5AQ29RF7 1337 aaKnown RBP11.86□□□□□ -0.51
SMARCAL1-213ENST00000496037 CACNA1FO60840 1977 aa11.85□□□□□ -0.51
SMARCAL1-213ENST00000496037 POTEB3A0JP26 581 aa11.85□□□□□ -0.51
SMARCAL1-213ENST00000496037 ZNF316A6NFI3 1004 aaPredicted RBP11.85□□□□□ -0.51
SMARCAL1-213ENST00000496037 RASGRF1Q13972 1273 aa11.85□□□□□ -0.51
SMARCAL1-213ENST00000496037 VARS2Q5ST30 1063 aaKnown RBP11.85□□□□□ -0.51
SMARCAL1-213ENST00000496037 POTEBQ6S5H4 581 aa11.85□□□□□ -0.51
SMARCAL1-213ENST00000496037 NCAPG2Q86XI2 1143 aa11.85□□□□□ -0.51
SMARCAL1-213ENST00000496037 ABRAQ8N0Z2 381 aa11.85□□□□□ -0.51
SMARCAL1-213ENST00000496037 ARNTL2Q8WYA1 636 aa11.85□□□□□ -0.51
SMARCAL1-213ENST00000496037 MFSD14AQ96MC6 490 aa11.85□□□□□ -0.51
SMARCAL1-213ENST00000496037 SPATC1LQ9H0A9 340 aa11.85□□□□□ -0.51
SMARCAL1-213ENST00000496037 MROH8Q9H579 483 aa11.85□□□□□ -0.51
SMARCAL1-213ENST00000496037 RPAP3Q9H6T3 665 aaPredicted RBP11.85□□□□□ -0.51
SMARCAL1-213ENST00000496037 DNAJC18Q9H819 358 aa11.85□□□□□ -0.51
SMARCAL1-213ENST00000496037 SYNRGQ9UMZ2 1314 aa11.85□□□□□ -0.51
SMARCAL1-213ENST00000496037 A0A0U1RQG5 324 aaPredicted RBP11.84□□□□□ -0.51
SMARCAL1-213ENST00000496037 ARVCFO00192 962 aa11.84□□□□□ -0.51
SMARCAL1-213ENST00000496037 GFRA3O60609 400 aa11.84□□□□□ -0.51
SMARCAL1-213ENST00000496037 IGSF3O75054 1194 aa11.84□□□□□ -0.51
SMARCAL1-213ENST00000496037 GH2P01242 217 aa11.84□□□□□ -0.51
SMARCAL1-213ENST00000496037 PTPN5P54829 565 aa11.84□□□□□ -0.51
SMARCAL1-213ENST00000496037 KCNA10Q16322 511 aa11.84□□□□□ -0.51
SMARCAL1-213ENST00000496037 CCDC102BQ68D86 513 aa11.84□□□□□ -0.51
SMARCAL1-213ENST00000496037 ATF7IPQ6VMQ6 1270 aa11.84□□□□□ -0.51
SMARCAL1-213ENST00000496037 FOXP4Q8IVH2 680 aaPredicted RBP11.84□□□□□ -0.51
SMARCAL1-213ENST00000496037 FAM126BQ8IXS8 530 aa11.84□□□□□ -0.51
SMARCAL1-213ENST00000496037 OXER1Q8TDS5 423 aa11.84□□□□□ -0.51
SMARCAL1-213ENST00000496037 HIPK3Q9H422 1215 aa11.84□□□□□ -0.51
SMARCAL1-213ENST00000496037 CEP126Q9P2H0 1117 aa11.84□□□□□ -0.51
SMARCAL1-213ENST00000496037 CNPY2Q9Y2B0 182 aa11.84□□□□□ -0.51
SMARCAL1-213ENST00000496037 EPOPA6NHQ4 379 aa11.83□□□□□ -0.52
SMARCAL1-213ENST00000496037 HLA-DOAP06340 250 aa11.83□□□□□ -0.52
SMARCAL1-213ENST00000496037 FCER1AP12319 257 aa11.83□□□□□ -0.52
SMARCAL1-213ENST00000496037 CDK7P50613 346 aa11.83□□□□□ -0.52
SMARCAL1-213ENST00000496037 PLS1Q14651 629 aa11.83□□□□□ -0.52
SMARCAL1-213ENST00000496037 RPUSD2Q8IZ73 545 aaKnown RBP11.83□□□□□ -0.52
SMARCAL1-213ENST00000496037 PCSK9Q8NBP7 692 aaKnown RBP11.83□□□□□ -0.52
SMARCAL1-213ENST00000496037 TINF2Q9BSI4 451 aa11.83□□□□□ -0.52
SMARCAL1-213ENST00000496037 KIAA1683Q9H0B3 1180 aa11.83□□□□□ -0.52
SMARCAL1-213ENST00000496037 ZNF536O15090 1300 aa11.83□□□□□ -0.52
SMARCAL1-213ENST00000496037 ZDBF2Q9HCK1 2354 aa11.82□□□□□ -0.52
SMARCAL1-213ENST00000496037 SIPA1L1O43166 1804 aa11.82□□□□□ -0.52
SMARCAL1-213ENST00000496037 VAMP4O75379 141 aa11.82□□□□□ -0.52
SMARCAL1-213ENST00000496037 RAB3GAP1Q15042 981 aa11.82□□□□□ -0.52
SMARCAL1-213ENST00000496037 LEXMQ3ZCV2 418 aa11.82□□□□□ -0.52
SMARCAL1-213ENST00000496037 HFE2Q6ZVN8 426 aa11.82□□□□□ -0.52
SMARCAL1-213ENST00000496037 RGS22Q8NE09 1264 aa11.82□□□□□ -0.52
SMARCAL1-213ENST00000496037 KLHDC9Q8NEP7 349 aa11.82□□□□□ -0.52
SMARCAL1-213ENST00000496037 SH3RF3Q8TEJ3 882 aaPredicted RBP11.82□□□□□ -0.52
SMARCAL1-213ENST00000496037 TANGO6Q9C0B7 1094 aa11.82□□□□□ -0.52
SMARCAL1-213ENST00000496037 SIL1Q9H173 461 aa11.82□□□□□ -0.52
SMARCAL1-213ENST00000496037 UBE2ZQ9H832 354 aaPredicted RBP11.82□□□□□ -0.52
SMARCAL1-213ENST00000496037 SPC25Q9HBM1 224 aa11.82□□□□□ -0.52
SMARCAL1-213ENST00000496037 HOXC10Q9NYD6 342 aa11.82□□□□□ -0.52
SMARCAL1-213ENST00000496037 ASGR1P07306 291 aa11.81□□□□□ -0.52
SMARCAL1-213ENST00000496037 C6orf222P0C671 652 aaPredicted RBP11.81□□□□□ -0.52
SMARCAL1-213ENST00000496037 ZNF865P0CJ78 1059 aaPredicted RBP11.81□□□□□ -0.52
SMARCAL1-213ENST00000496037 IL9P15248 144 aa11.81□□□□□ -0.52
SMARCAL1-213ENST00000496037 TAL1P17542 331 aaPredicted RBP11.81□□□□□ -0.52
SMARCAL1-213ENST00000496037 KCNA5P22460 613 aa11.81□□□□□ -0.52
SMARCAL1-213ENST00000496037 ADORA1P30542 326 aa11.81□□□□□ -0.52
SMARCAL1-213ENST00000496037 CCL23P55773 120 aa11.81□□□□□ -0.52
SMARCAL1-213ENST00000496037 GRB10Q13322 594 aa11.81□□□□□ -0.52
SMARCAL1-213ENST00000496037 COG2Q14746 738 aa11.81□□□□□ -0.52
SMARCAL1-213ENST00000496037 TMCO4Q5TGY1 634 aa11.81□□□□□ -0.52
SMARCAL1-213ENST00000496037 ATG9AQ7Z3C6 839 aa11.81□□□□□ -0.52
SMARCAL1-213ENST00000496037 METTL16Q86W50 562 aaKnown RBP11.81□□□□□ -0.52
SMARCAL1-213ENST00000496037 MAPKAPK5Q8IW41 473 aa11.81□□□□□ -0.52
SMARCAL1-213ENST00000496037 MB21D1Q8N884 522 aa11.81□□□□□ -0.52
SMARCAL1-213ENST00000496037 ZNF384Q8TF68 577 aa11.81□□□□□ -0.52
SMARCAL1-213ENST00000496037 NSUN4Q96CB9 384 aaKnown RBP11.81□□□□□ -0.52
SMARCAL1-213ENST00000496037 PRRX2Q99811 253 aa11.81□□□□□ -0.52
SMARCAL1-213ENST00000496037 RAI14Q9P0K7 980 aa11.81□□□□□ -0.52
SMARCAL1-213ENST00000496037 FLT1P17948 1338 aa11.81□□□□□ -0.52
SMARCAL1-213ENST00000496037 FANCIQ9NVI1 1328 aa11.81□□□□□ -0.52
SMARCAL1-213ENST00000496037 BAG3O95817 575 aa11.8□□□□□ -0.52
SMARCAL1-213ENST00000496037 CST5P28325 142 aaPredicted RBP11.8□□□□□ -0.52
SMARCAL1-213ENST00000496037 CCSAPQ6IQ19 270 aaPredicted RBP11.8□□□□□ -0.52
SMARCAL1-213ENST00000496037 PTCRAQ6ISU1 281 aaPredicted RBP11.8□□□□□ -0.52
SMARCAL1-213ENST00000496037 ERMP1Q7Z2K6 904 aa11.8□□□□□ -0.52
SMARCAL1-213ENST00000496037 TGFBRAP1Q8WUH2 860 aa11.8□□□□□ -0.52
SMARCAL1-213ENST00000496037 CDCA7LQ96GN5 454 aa11.8□□□□□ -0.52
SMARCAL1-213ENST00000496037 MMP19Q99542 508 aa11.8□□□□□ -0.52
SMARCAL1-213ENST00000496037 FAM184BQ9ULE4 1060 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms