RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 CCDC144CPQ8IYA2 1237 aa17.2■□□□□ 0.34
HDAC9-226ENST00000496026 MAP3K14Q99558 947 aa17.2■□□□□ 0.34
HDAC9-226ENST00000496026 AGXT2Q9BYV1 514 aa17.2■□□□□ 0.34
HDAC9-226ENST00000496026 BRPF3Q9ULD4 1205 aa17.2■□□□□ 0.34
HDAC9-226ENST00000496026 RABGAP1Q9Y3P9 1069 aa17.2■□□□□ 0.34
HDAC9-226ENST00000496026 KLRF2D3W0D1 207 aa17.19■□□□□ 0.34
HDAC9-226ENST00000496026 GPR25O00155 361 aa17.19■□□□□ 0.34
HDAC9-226ENST00000496026 VWA5AO00534 786 aa17.19■□□□□ 0.34
HDAC9-226ENST00000496026 DHX16O60231 1041 aaKnown RBP17.19■□□□□ 0.34
HDAC9-226ENST00000496026 RXRAP19793 462 aa17.19■□□□□ 0.34
HDAC9-226ENST00000496026 CTCFP49711 727 aaPredicted RBP17.19■□□□□ 0.34
HDAC9-226ENST00000496026 ANKRD1Q15327 319 aa17.19■□□□□ 0.34
HDAC9-226ENST00000496026 BTNL9Q6UXG8 535 aa17.19■□□□□ 0.34
HDAC9-226ENST00000496026 STAG2Q8N3U4 1231 aa17.19■□□□□ 0.34
HDAC9-226ENST00000496026 MB21D1Q8N884 522 aa17.19■□□□□ 0.34
HDAC9-226ENST00000496026 KIF2CQ99661 725 aa17.19■□□□□ 0.34
HDAC9-226ENST00000496026 UBA5Q9GZZ9 404 aa17.19■□□□□ 0.34
HDAC9-226ENST00000496026 RBPJLQ9UBG7 517 aa17.19■□□□□ 0.34
HDAC9-226ENST00000496026 MAD2L2Q9UI95 211 aa17.19■□□□□ 0.34
HDAC9-226ENST00000496026 PRR12Q9ULL5 1215 aa17.19■□□□□ 0.34
HDAC9-226ENST00000496026 CEP350Q5VT06 3117 aa17.18■□□□□ 0.34
HDAC9-226ENST00000496026 PALM3A6NDB9 673 aaPredicted RBP17.18■□□□□ 0.34
HDAC9-226ENST00000496026 GOLGA8AA7E2F4 631 aa17.18■□□□□ 0.34
HDAC9-226ENST00000496026 GOLGA8BA8MQT2 603 aa17.18■□□□□ 0.34
HDAC9-226ENST00000496026 FDX1P10109 184 aa17.18■□□□□ 0.34
HDAC9-226ENST00000496026 HSPA8P11142 646 aaKnown RBP17.18■□□□□ 0.34
HDAC9-226ENST00000496026 BCRP11274 1271 aa17.18■□□□□ 0.34
HDAC9-226ENST00000496026 GNAQP50148 359 aa17.18■□□□□ 0.34
HDAC9-226ENST00000496026 SP3Q02447 781 aa17.18■□□□□ 0.34
HDAC9-226ENST00000496026 PLS1Q14651 629 aa17.18■□□□□ 0.34
HDAC9-226ENST00000496026 RABEP1Q15276 862 aa17.18■□□□□ 0.34
HDAC9-226ENST00000496026 FAM110CQ1W6H9 321 aa17.18■□□□□ 0.34
HDAC9-226ENST00000496026 FANCBQ8NB91 859 aa17.18■□□□□ 0.34
HDAC9-226ENST00000496026 GPRC5AQ8NFJ5 357 aa17.18■□□□□ 0.34
HDAC9-226ENST00000496026 LARP6Q9BRS8 491 aaKnown RBP17.18■□□□□ 0.34
HDAC9-226ENST00000496026 ALDH8A1Q9H2A2 487 aaPredicted RBP17.18■□□□□ 0.34
HDAC9-226ENST00000496026 TXNRD2Q9NNW7 524 aa17.18■□□□□ 0.34
HDAC9-226ENST00000496026 BTBD7Q9P203 1132 aa17.18■□□□□ 0.34
HDAC9-226ENST00000496026 ADAMTS5Q9UNA0 930 aa17.18■□□□□ 0.34
HDAC9-226ENST00000496026 PEX10O60683 326 aa17.17■□□□□ 0.34
HDAC9-226ENST00000496026 FKTNO75072 461 aa17.17■□□□□ 0.34
HDAC9-226ENST00000496026 AK2P54819 239 aa17.17■□□□□ 0.34
HDAC9-226ENST00000496026 ERVK-9P63128 1117 aa17.17■□□□□ 0.34
HDAC9-226ENST00000496026 ERVK-24P63145 666 aa17.17■□□□□ 0.34
HDAC9-226ENST00000496026 KIF22Q14807 665 aa17.17■□□□□ 0.34
HDAC9-226ENST00000496026 RTN1Q16799 776 aa17.17■□□□□ 0.34
HDAC9-226ENST00000496026 NOM1Q5C9Z4 860 aaKnown RBP17.17■□□□□ 0.34
HDAC9-226ENST00000496026 POTEEQ6S8J3 1075 aa17.17■□□□□ 0.34
HDAC9-226ENST00000496026 CCAR1Q8IX12 1150 aaKnown RBP17.17■□□□□ 0.34
HDAC9-226ENST00000496026 CPVLQ9H3G5 476 aa17.17■□□□□ 0.34
HDAC9-226ENST00000496026 MORF4L1Q9UBU8 362 aa17.17■□□□□ 0.34
HDAC9-226ENST00000496026 CNMDO75829 334 aa17.16■□□□□ 0.34
HDAC9-226ENST00000496026 METAP2P50579 478 aaKnown RBP eCLIP17.16■□□□□ 0.34
HDAC9-226ENST00000496026 LBX1P52954 281 aa17.16■□□□□ 0.34
HDAC9-226ENST00000496026 RCAN1P53805 252 aa17.16■□□□□ 0.34
HDAC9-226ENST00000496026 SNAP25P60880 206 aa17.16■□□□□ 0.34
HDAC9-226ENST00000496026 CCNA1P78396 465 aa17.16■□□□□ 0.34
HDAC9-226ENST00000496026 TMEM132BQ14DG7 1078 aa17.16■□□□□ 0.34
HDAC9-226ENST00000496026 CCDC174Q6PII3 467 aa17.16■□□□□ 0.34
HDAC9-226ENST00000496026 NOL8Q76FK4 1167 aaKnown RBP17.16■□□□□ 0.34
HDAC9-226ENST00000496026 ADGRF4Q8IZF3 695 aa17.16■□□□□ 0.34
HDAC9-226ENST00000496026 CPXCR1Q8N123 301 aa17.16■□□□□ 0.34
HDAC9-226ENST00000496026 ZNF296Q8WUU4 475 aaPredicted RBP17.16■□□□□ 0.34
HDAC9-226ENST00000496026 SPATC1LQ9H0A9 340 aa17.16■□□□□ 0.34
HDAC9-226ENST00000496026 SLC38A10Q9HBR0 1119 aa17.16■□□□□ 0.34
HDAC9-226ENST00000496026 VAT1LQ9HCJ6 419 aa17.16■□□□□ 0.34
HDAC9-226ENST00000496026 RBM28Q9NW13 759 aaKnown RBP17.16■□□□□ 0.34
HDAC9-226ENST00000496026 ECM2O94769 699 aaPredicted RBP17.15■□□□□ 0.34
HDAC9-226ENST00000496026 PDIA3P30101 505 aaKnown RBP17.15■□□□□ 0.34
HDAC9-226ENST00000496026 SLC4A3P48751 1232 aa17.15■□□□□ 0.34
HDAC9-226ENST00000496026 EVCP57679 992 aa17.15■□□□□ 0.34
HDAC9-226ENST00000496026 Q3C1V9 767 aa17.15■□□□□ 0.34
HDAC9-226ENST00000496026 ZNF274Q96GC6 653 aaPredicted RBP17.15■□□□□ 0.34
HDAC9-226ENST00000496026 ERO1AQ96HE7 468 aa17.15■□□□□ 0.34
HDAC9-226ENST00000496026 LZTS2Q9BRK4 669 aa17.15■□□□□ 0.34
HDAC9-226ENST00000496026 CWC22Q9HCG8 908 aaKnown RBP17.15■□□□□ 0.34
HDAC9-226ENST00000496026 RAVER2Q9HCJ3 691 aaKnown RBP17.15■□□□□ 0.34
HDAC9-226ENST00000496026 CCDC196A0A1B0GTZ2 297 aa17.14■□□□□ 0.33
HDAC9-226ENST00000496026 ST18O60284 1047 aa17.14■□□□□ 0.33
HDAC9-226ENST00000496026 PLEKHA8P1O95397 391 aa17.14■□□□□ 0.33
HDAC9-226ENST00000496026 STAT3P40763 770 aa17.14■□□□□ 0.33
HDAC9-226ENST00000496026 LACTBP83111 547 aaPredicted RBP17.14■□□□□ 0.33
HDAC9-226ENST00000496026 STK3Q13188 491 aa17.14■□□□□ 0.33
HDAC9-226ENST00000496026 PPP2R5BQ15173 497 aa17.14■□□□□ 0.33
HDAC9-226ENST00000496026 WDR78Q5VTH9 848 aa17.14■□□□□ 0.33
HDAC9-226ENST00000496026 REPS2Q8NFH8 660 aa17.14■□□□□ 0.33
HDAC9-226ENST00000496026 CD99L2Q8TCZ2 262 aa17.14■□□□□ 0.33
HDAC9-226ENST00000496026 RANBP17Q9H2T7 1088 aaKnown RBP17.14■□□□□ 0.33
HDAC9-226ENST00000496026 HPS5Q9UPZ3 1129 aa17.14■□□□□ 0.33
HDAC9-226ENST00000496026 OAZ1P54368 228 aa17.13■□□□□ 0.33
HDAC9-226ENST00000496026 FCGRTP55899 365 aa17.13■□□□□ 0.33
HDAC9-226ENST00000496026 CCT2P78371 535 aaKnown RBP17.13■□□□□ 0.33
HDAC9-226ENST00000496026 CDC37Q16543 378 aaPredicted RBP17.13■□□□□ 0.33
HDAC9-226ENST00000496026 SNRNP48Q6IEG0 339 aaKnown RBP17.13■□□□□ 0.33
HDAC9-226ENST00000496026 TMTC3Q6ZXV5 915 aa17.13■□□□□ 0.33
HDAC9-226ENST00000496026 NBPF11Q86T75 865 aa17.13■□□□□ 0.33
HDAC9-226ENST00000496026 NCAPG2Q86XI2 1143 aa17.13■□□□□ 0.33
HDAC9-226ENST00000496026 HOMER1Q86YM7 354 aa17.13■□□□□ 0.33
HDAC9-226ENST00000496026 CMTR1Q8N1G2 835 aaKnown RBP17.13■□□□□ 0.33
HDAC9-226ENST00000496026 CCDC82Q8N4S0 544 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms