RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 SNW1Q13573 536 aaKnown RBP8.7□□□□□ -1.02
CCDC39-207ENST00000495817 PPFIBP1Q86W92 1011 aa8.7□□□□□ -1.02
CCDC39-207ENST00000495817 LINC00116Q8NCU8 138 aa8.7□□□□□ -1.02
CCDC39-207ENST00000495817 CCDC113Q9H0I3 377 aa8.7□□□□□ -1.02
CCDC39-207ENST00000495817 MSRB2Q9Y3D2 182 aa8.7□□□□□ -1.02
CCDC39-207ENST00000495817 A0A1W2PQH9 124 aa8.69□□□□□ -1.02
CCDC39-207ENST00000495817 SHOXO15266 292 aa8.69□□□□□ -1.02
CCDC39-207ENST00000495817 RAC2P15153 192 aa8.69□□□□□ -1.02
CCDC39-207ENST00000495817 TEKQ02763 1124 aa8.69□□□□□ -1.02
CCDC39-207ENST00000495817 FXNQ16595 210 aa8.69□□□□□ -1.02
CCDC39-207ENST00000495817 TCTN2Q96GX1 697 aa8.69□□□□□ -1.02
CCDC39-207ENST00000495817 SRPK1Q96SB4 655 aaKnown RBP8.69□□□□□ -1.02
CCDC39-207ENST00000495817 C19orf73Q9NVV2 129 aa8.69□□□□□ -1.02
CCDC39-207ENST00000495817 FBXL21Q9UKT6 434 aa8.69□□□□□ -1.02
CCDC39-207ENST00000495817 TBX22Q9Y458 520 aa8.69□□□□□ -1.02
CCDC39-207ENST00000495817 DUSP4Q13115 394 aa8.68□□□□□ -1.02
CCDC39-207ENST00000495817 DDR2Q16832 855 aa8.68□□□□□ -1.02
CCDC39-207ENST00000495817 TDRD10Q5VZ19 366 aaKnown RBP8.68□□□□□ -1.02
CCDC39-207ENST00000495817 DEPDC7Q96QD5 511 aa8.68□□□□□ -1.02
CCDC39-207ENST00000495817 GFOD1Q9NXC2 390 aa8.68□□□□□ -1.02
CCDC39-207ENST00000495817 LTBP3Q9NS15 1303 aa8.68□□□□□ -1.02
CCDC39-207ENST00000495817 DNAJC25-GNG10A0A024R161 153 aa8.67□□□□□ -1.02
CCDC39-207ENST00000495817 SLC7A5Q01650 507 aa8.67□□□□□ -1.02
CCDC39-207ENST00000495817 RASA3Q14644 834 aa8.67□□□□□ -1.02
CCDC39-207ENST00000495817 PPP2R5EQ16537 467 aa8.67□□□□□ -1.02
CCDC39-207ENST00000495817 AXDND1Q5T1B0 1012 aaPredicted RBP8.67□□□□□ -1.02
CCDC39-207ENST00000495817 CELF2-AS1Q8N7Q2 184 aa8.67□□□□□ -1.02
CCDC39-207ENST00000495817 PDZD8Q8NEN9 1154 aa8.67□□□□□ -1.02
CCDC39-207ENST00000495817 SNTG2Q9NY99 539 aa8.67□□□□□ -1.02
CCDC39-207ENST00000495817 TCFL5Q9UL49 500 aa8.67□□□□□ -1.02
CCDC39-207ENST00000495817 ZNF281Q9Y2X9 895 aa8.67□□□□□ -1.02
CCDC39-207ENST00000495817 FHOD1Q9Y613 1164 aa8.67□□□□□ -1.02
CCDC39-207ENST00000495817 SSU72P8A0A1W2PR75 194 aa8.66□□□□□ -1.02
CCDC39-207ENST00000495817 GSNP06396 782 aa8.66□□□□□ -1.02
CCDC39-207ENST00000495817 BMP8BP34820 402 aa8.66□□□□□ -1.02
CCDC39-207ENST00000495817 TCEAL1Q15170 157 aa8.66□□□□□ -1.02
CCDC39-207ENST00000495817 RALGPS1Q5JS13 557 aa8.66□□□□□ -1.02
CCDC39-207ENST00000495817 ZSWIM9Q86XI8 627 aa8.66□□□□□ -1.02
CCDC39-207ENST00000495817 OXR1Q8N573 874 aa8.66□□□□□ -1.02
CCDC39-207ENST00000495817 USHBP1Q8N6Y0 703 aa8.66□□□□□ -1.02
CCDC39-207ENST00000495817 HAUS7Q99871 368 aa8.66□□□□□ -1.02
CCDC39-207ENST00000495817 DSCC1Q9BVC3 393 aa8.66□□□□□ -1.02
CCDC39-207ENST00000495817 GP6Q9HCN6 339 aa8.66□□□□□ -1.02
CCDC39-207ENST00000495817 A0A087WZG4 1122 aa8.65□□□□□ -1.02
CCDC39-207ENST00000495817 ZGLP1P0C6A0 271 aa8.65□□□□□ -1.02
CCDC39-207ENST00000495817 ITGA4P13612 1032 aa8.65□□□□□ -1.02
CCDC39-207ENST00000495817 CHRNEQ04844 493 aa8.65□□□□□ -1.02
CCDC39-207ENST00000495817 GNPTABQ3T906 1256 aa8.65□□□□□ -1.02
CCDC39-207ENST00000495817 DCAF15Q66K64 600 aa8.65□□□□□ -1.02
CCDC39-207ENST00000495817 SDE2Q6IQ49 451 aa8.65□□□□□ -1.02
CCDC39-207ENST00000495817 FAM168AQ92567 244 aa8.65□□□□□ -1.02
CCDC39-207ENST00000495817 GBP3Q9H0R5 595 aa8.65□□□□□ -1.02
CCDC39-207ENST00000495817 ADAMTS10Q9H324 1103 aa8.65□□□□□ -1.02
CCDC39-207ENST00000495817 WHRNQ9P202 907 aa8.65□□□□□ -1.02
CCDC39-207ENST00000495817 FITM1A5D6W6 292 aa8.64□□□□□ -1.03
CCDC39-207ENST00000495817 CBFA2T2O43439 604 aa8.64□□□□□ -1.03
CCDC39-207ENST00000495817 HPXP02790 462 aa8.64□□□□□ -1.03
CCDC39-207ENST00000495817 TP53P04637 393 aaPredicted RBP8.64□□□□□ -1.03
CCDC39-207ENST00000495817 SYPP08247 313 aa8.64□□□□□ -1.03
CCDC39-207ENST00000495817 CD247P20963 164 aa8.64□□□□□ -1.03
CCDC39-207ENST00000495817 RASGRF1Q13972 1273 aa8.64□□□□□ -1.03
CCDC39-207ENST00000495817 NR0B2Q15466 257 aa8.64□□□□□ -1.03
CCDC39-207ENST00000495817 NOL9Q5SY16 702 aaKnown RBP8.64□□□□□ -1.03
CCDC39-207ENST00000495817 LARP1BQ659C4 914 aaKnown RBP8.64□□□□□ -1.03
CCDC39-207ENST00000495817 ANKS4BQ8N8V4 417 aa8.64□□□□□ -1.03
CCDC39-207ENST00000495817 KIRREL1Q96J84 757 aa8.64□□□□□ -1.03
CCDC39-207ENST00000495817 FOXP3Q9BZS1 431 aa8.64□□□□□ -1.03
CCDC39-207ENST00000495817 FAM221BA6H8Z2 402 aa8.63□□□□□ -1.03
CCDC39-207ENST00000495817 PDPK1O15530 556 aa8.63□□□□□ -1.03
CCDC39-207ENST00000495817 ZNF205O95201 554 aa8.63□□□□□ -1.03
CCDC39-207ENST00000495817 HK2P52789 917 aa8.63□□□□□ -1.03
CCDC39-207ENST00000495817 NCAPHQ15003 741 aa8.63□□□□□ -1.03
CCDC39-207ENST00000495817 KCNMB1Q16558 191 aa8.63□□□□□ -1.03
CCDC39-207ENST00000495817 CWF19L1Q69YN2 538 aaKnown RBP8.63□□□□□ -1.03
CCDC39-207ENST00000495817 JAZF1Q86VZ6 243 aa8.63□□□□□ -1.03
CCDC39-207ENST00000495817 SPPL2CQ8IUH8 684 aa8.63□□□□□ -1.03
CCDC39-207ENST00000495817 LILRA2Q8N149 483 aa8.63□□□□□ -1.03
CCDC39-207ENST00000495817 KLHL6Q8WZ60 621 aa8.63□□□□□ -1.03
CCDC39-207ENST00000495817 FMNL2Q96PY5 1086 aa8.63□□□□□ -1.03
CCDC39-207ENST00000495817 ST7Q9NRC1 585 aa8.63□□□□□ -1.03
CCDC39-207ENST00000495817 SF3B6Q9Y3B4 125 aaKnown RBP8.63□□□□□ -1.03
CCDC39-207ENST00000495817 TMEM82A0PJX8 343 aa8.62□□□□□ -1.03
CCDC39-207ENST00000495817 NAT2P11245 290 aa8.62□□□□□ -1.03
CCDC39-207ENST00000495817 CTSKP43235 329 aa8.62□□□□□ -1.03
CCDC39-207ENST00000495817 ZNF143P52747 638 aaPredicted RBP8.62□□□□□ -1.03
CCDC39-207ENST00000495817 ZNF445P59923 1031 aa8.62□□□□□ -1.03
CCDC39-207ENST00000495817 HEATR6Q6AI08 1181 aaKnown RBP8.62□□□□□ -1.03
CCDC39-207ENST00000495817 VHLLQ6RSH7 139 aa8.62□□□□□ -1.03
CCDC39-207ENST00000495817 WAPLQ7Z5K2 1190 aa8.62□□□□□ -1.03
CCDC39-207ENST00000495817 NLGN1Q8N2Q7 840 aa8.62□□□□□ -1.03
CCDC39-207ENST00000495817 MICAL1Q8TDZ2 1067 aa8.62□□□□□ -1.03
CCDC39-207ENST00000495817 LINC01599Q8WXQ3 324 aa8.62□□□□□ -1.03
CCDC39-207ENST00000495817 FCRL2Q96LA5 508 aaPredicted RBP8.62□□□□□ -1.03
CCDC39-207ENST00000495817 KLHL25Q9H0H3 589 aa8.62□□□□□ -1.03
CCDC39-207ENST00000495817 FAM86C1Q9NVL1 165 aa8.62□□□□□ -1.03
CCDC39-207ENST00000495817 ZNF451Q9Y4E5 1061 aa8.62□□□□□ -1.03
CCDC39-207ENST00000495817 RNF114Q9Y508 228 aa8.62□□□□□ -1.03
CCDC39-207ENST00000495817 GJB6O95452 261 aa8.61□□□□□ -1.03
CCDC39-207ENST00000495817 GLI1P08151 1106 aa8.61□□□□□ -1.03
CCDC39-207ENST00000495817 RPL10P27635 214 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms