RNA–Protein interactions for RNA: ENST00000495643.1

DCTN1-223, Transcript of dynactin subunit 1, human

TSL 3

Gene DCTN1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCTN1-223	ENST00000495643	FARP2	O94887	1054 aa	Predicted RBP	12.94	□□□□□ -0.34
DCTN1-223	ENST00000495643	FCER1A	P12319	257 aa		12.94	□□□□□ -0.34
DCTN1-223	ENST00000495643	MCC	P23508	829 aa		12.94	□□□□□ -0.34
DCTN1-223	ENST00000495643	CHML	P26374	656 aa		12.94	□□□□□ -0.34
DCTN1-223	ENST00000495643	CCND3	P30281	292 aa	Predicted RBP	12.94	□□□□□ -0.34
DCTN1-223	ENST00000495643	OLFML2B	Q68BL8	750 aa		12.94	□□□□□ -0.34
DCTN1-223	ENST00000495643	RCSD1	Q6JBY9	416 aa		12.94	□□□□□ -0.34
DCTN1-223	ENST00000495643	DPP9	Q86TI2	863 aa		12.94	□□□□□ -0.34
DCTN1-223	ENST00000495643	KIFC2	Q96AC6	838 aa		12.94	□□□□□ -0.34
DCTN1-223	ENST00000495643	RNF41	Q9H4P4	317 aa	Predicted RBP	12.94	□□□□□ -0.34
DCTN1-223	ENST00000495643	SLC38A10	Q9HBR0	1119 aa		12.94	□□□□□ -0.34
DCTN1-223	ENST00000495643	RIPK3	Q9Y572	518 aa		12.94	□□□□□ -0.34
DCTN1-223	ENST00000495643	NEDD4	P46934	1319 aa		12.93	□□□□□ -0.34
DCTN1-223	ENST00000495643	ZBED4	O75132	1171 aa		12.93	□□□□□ -0.34
DCTN1-223	ENST00000495643	CYP2C19	P33261	490 aa		12.93	□□□□□ -0.34
DCTN1-223	ENST00000495643	COPB2	P35606	906 aa		12.93	□□□□□ -0.34
DCTN1-223	ENST00000495643	SLC1A4	P43007	532 aa		12.93	□□□□□ -0.34
DCTN1-223	ENST00000495643	MNX1	P50219	401 aa	Predicted RBP	12.93	□□□□□ -0.34
DCTN1-223	ENST00000495643	STAT2	P52630	851 aa		12.93	□□□□□ -0.34
DCTN1-223	ENST00000495643	MFSD14C	Q5VZR4	134 aa		12.93	□□□□□ -0.34
DCTN1-223	ENST00000495643	LHX8	Q68G74	356 aa		12.93	□□□□□ -0.34
DCTN1-223	ENST00000495643	SNRNP48	Q6IEG0	339 aa	Known RBP	12.93	□□□□□ -0.34
DCTN1-223	ENST00000495643	RASGRP2	Q7LDG7	609 aa		12.93	□□□□□ -0.34
DCTN1-223	ENST00000495643	ANKLE1	Q8NAG6	615 aa		12.93	□□□□□ -0.34
DCTN1-223	ENST00000495643	CHURC1	Q8WUH1	139 aa		12.93	□□□□□ -0.34
DCTN1-223	ENST00000495643	TMEM47	Q9BQJ4	181 aa		12.93	□□□□□ -0.34
DCTN1-223	ENST00000495643	TEX13B	Q9BXU2	312 aa		12.93	□□□□□ -0.34
DCTN1-223	ENST00000495643	OGDHL	Q9ULD0	1010 aa		12.93	□□□□□ -0.34
DCTN1-223	ENST00000495643	RAD50	Q92878	1312 aa		12.92	□□□□□ -0.34
DCTN1-223	ENST00000495643	FDX1	P10109	184 aa		12.92	□□□□□ -0.34
DCTN1-223	ENST00000495643	TOP1	P11387	765 aa	Known RBP	12.92	□□□□□ -0.34
DCTN1-223	ENST00000495643	OAZ1	P54368	228 aa		12.92	□□□□□ -0.34
DCTN1-223	ENST00000495643	KCTD1	Q719H9	257 aa		12.92	□□□□□ -0.34
DCTN1-223	ENST00000495643	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	12.92	□□□□□ -0.34
DCTN1-223	ENST00000495643	FAM160B2	Q86V87	743 aa		12.92	□□□□□ -0.34
DCTN1-223	ENST00000495643	CPXCR1	Q8N123	301 aa		12.92	□□□□□ -0.34
DCTN1-223	ENST00000495643	TRPV1	Q8NER1	839 aa		12.92	□□□□□ -0.34
DCTN1-223	ENST00000495643	CHMP4C	Q96CF2	233 aa		12.92	□□□□□ -0.34
DCTN1-223	ENST00000495643	MAML3	Q96JK9	1138 aa		12.92	□□□□□ -0.34
DCTN1-223	ENST00000495643	TTC14	Q96N46	770 aa		12.92	□□□□□ -0.34
DCTN1-223	ENST00000495643	MMP19	Q99542	508 aa		12.92	□□□□□ -0.34
DCTN1-223	ENST00000495643	RAVER2	Q9HCJ3	691 aa	Known RBP	12.92	□□□□□ -0.34
DCTN1-223	ENST00000495643	SLC5A4	Q9NY91	659 aa		12.92	□□□□□ -0.34
DCTN1-223	ENST00000495643	CTNNA3	Q9UI47	895 aa		12.92	□□□□□ -0.34
DCTN1-223	ENST00000495643	ALPK3	Q96L96	1907 aa		12.92	□□□□□ -0.34
DCTN1-223	ENST00000495643	PGK2	P07205	417 aa		12.91	□□□□□ -0.34
DCTN1-223	ENST00000495643	CYBA	P13498	195 aa		12.91	□□□□□ -0.34
DCTN1-223	ENST00000495643	NT5C2	P49902	561 aa		12.91	□□□□□ -0.34
DCTN1-223	ENST00000495643	KCTD2	Q14681	263 aa		12.91	□□□□□ -0.34
DCTN1-223	ENST00000495643	IMMT	Q16891	758 aa	Known RBP	12.91	□□□□□ -0.34
DCTN1-223	ENST00000495643	ZNF792	Q3KQV3	632 aa		12.91	□□□□□ -0.34
DCTN1-223	ENST00000495643	CENPQ	Q7L2Z9	268 aa	Predicted RBP	12.91	□□□□□ -0.34
DCTN1-223	ENST00000495643	DIS3L	Q8TF46	1054 aa	Known RBP	12.91	□□□□□ -0.34
DCTN1-223	ENST00000495643	DCAF4	Q8WV16	495 aa		12.91	□□□□□ -0.34
DCTN1-223	ENST00000495643	RUFY2	Q8WXA3	655 aa		12.91	□□□□□ -0.34
DCTN1-223	ENST00000495643	ESR2	Q92731	530 aa		12.91	□□□□□ -0.34
DCTN1-223	ENST00000495643	PAWR	Q96IZ0	340 aa	Known RBP	12.91	□□□□□ -0.34
DCTN1-223	ENST00000495643	DIS3	Q9Y2L1	958 aa	Known RBP	12.91	□□□□□ -0.34
DCTN1-223	ENST00000495643	CEP290	O15078	2479 aa		12.9	□□□□□ -0.34
DCTN1-223	ENST00000495643	ZNF536	O15090	1300 aa		12.9	□□□□□ -0.34
DCTN1-223	ENST00000495643	DNAJC25-GNG10	A0A024R161	153 aa		12.9	□□□□□ -0.34
DCTN1-223	ENST00000495643	SGSM2	O43147	1006 aa		12.9	□□□□□ -0.34
DCTN1-223	ENST00000495643	KDM4A	O75164	1064 aa		12.9	□□□□□ -0.34
DCTN1-223	ENST00000495643	PTH1R	Q03431	593 aa		12.9	□□□□□ -0.34
DCTN1-223	ENST00000495643	BTNL9	Q6UXG8	535 aa		12.9	□□□□□ -0.34
DCTN1-223	ENST00000495643	ANKS1A	Q92625	1134 aa		12.9	□□□□□ -0.34
DCTN1-223	ENST00000495643	ZKSCAN3	Q9BRR0	538 aa		12.9	□□□□□ -0.34
DCTN1-223	ENST00000495643	PRR12	Q9ULL5	1215 aa		12.9	□□□□□ -0.34
DCTN1-223	ENST00000495643	MTMR7	Q9Y216	660 aa		12.9	□□□□□ -0.34
DCTN1-223	ENST00000495643	CTDP1	Q9Y5B0	961 aa	Predicted RBP	12.9	□□□□□ -0.34
DCTN1-223	ENST00000495643	SMCHD1	A6NHR9	2005 aa		12.89	□□□□□ -0.35
DCTN1-223	ENST00000495643	DNAH12	Q6ZR08	3092 aa		12.89	□□□□□ -0.35
DCTN1-223	ENST00000495643		B4E1Z4	1266 aa		12.89	□□□□□ -0.35
DCTN1-223	ENST00000495643	SNHG28	P0DPA3	235 aa		12.89	□□□□□ -0.35
DCTN1-223	ENST00000495643	SLC4A3	P48751	1232 aa		12.89	□□□□□ -0.35
DCTN1-223	ENST00000495643	IK	Q13123	557 aa	Predicted RBP	12.89	□□□□□ -0.35
DCTN1-223	ENST00000495643	TTBK2	Q6IQ55	1244 aa		12.89	□□□□□ -0.35
DCTN1-223	ENST00000495643	NECAB2	Q7Z6G3	386 aa		12.89	□□□□□ -0.35
DCTN1-223	ENST00000495643	DGKH	Q86XP1	1220 aa		12.89	□□□□□ -0.35
DCTN1-223	ENST00000495643	CHST13	Q8NET6	341 aa		12.89	□□□□□ -0.35
DCTN1-223	ENST00000495643	AGBL1	Q96MI9	1066 aa		12.89	□□□□□ -0.35
DCTN1-223	ENST00000495643	TINF2	Q9BSI4	451 aa		12.89	□□□□□ -0.35
DCTN1-223	ENST00000495643	HTATIP2	Q9BUP3	242 aa		12.89	□□□□□ -0.35
DCTN1-223	ENST00000495643	ZSWIM5	Q9P217	1185 aa		12.89	□□□□□ -0.35
DCTN1-223	ENST00000495643	FBXO40	Q9UH90	709 aa		12.89	□□□□□ -0.35
DCTN1-223	ENST00000495643	DDX20	Q9UHI6	824 aa	Known RBP	12.89	□□□□□ -0.35
DCTN1-223	ENST00000495643	ISY1	Q9ULR0	285 aa	Known RBP	12.89	□□□□□ -0.35
DCTN1-223	ENST00000495643	PDHB	P11177	359 aa		12.88	□□□□□ -0.35
DCTN1-223	ENST00000495643	COL6A1	P12109	1028 aa		12.88	□□□□□ -0.35
DCTN1-223	ENST00000495643	CNGA1	P29973	690 aa		12.88	□□□□□ -0.35
DCTN1-223	ENST00000495643	SLC16A2	P36021	539 aa		12.88	□□□□□ -0.35
DCTN1-223	ENST00000495643	SNAP25	P60880	206 aa		12.88	□□□□□ -0.35
DCTN1-223	ENST00000495643	CCDC96	Q2M329	555 aa		12.88	□□□□□ -0.35
DCTN1-223	ENST00000495643	CCDC178	Q5BJE1	867 aa		12.88	□□□□□ -0.35
DCTN1-223	ENST00000495643	PRAMEF19	Q5SWL8	479 aa		12.88	□□□□□ -0.35
DCTN1-223	ENST00000495643	SKAP1	Q86WV1	359 aa		12.88	□□□□□ -0.35
DCTN1-223	ENST00000495643	DPF3	Q92784	378 aa		12.88	□□□□□ -0.35
DCTN1-223	ENST00000495643	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	12.88	□□□□□ -0.35
DCTN1-223	ENST00000495643	KRT23	Q9C075	422 aa		12.88	□□□□□ -0.35
DCTN1-223	ENST00000495643	CNNM2	Q9H8M5	875 aa		12.88	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms