RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 DSCC1Q9BVC3 393 aa21.25■□□□□ 0.99
COL20A1-207ENST00000494913 RNF41Q9H4P4 317 aaPredicted RBP21.25■□□□□ 0.99
COL20A1-207ENST00000494913 SLC5A4Q9NY91 659 aa21.25■□□□□ 0.99
COL20A1-207ENST00000494913 MTMR7Q9Y216 660 aa21.25■□□□□ 0.99
COL20A1-207ENST00000494913 PCP11498 1178 aaKnown RBP21.24■□□□□ 0.99
COL20A1-207ENST00000494913 CYP2C19P33261 490 aa21.24■□□□□ 0.99
COL20A1-207ENST00000494913 SLC4A3P48751 1232 aa21.24■□□□□ 0.99
COL20A1-207ENST00000494913 SNRNP48Q6IEG0 339 aaKnown RBP21.24■□□□□ 0.99
COL20A1-207ENST00000494913 CPXCR1Q8N123 301 aa21.24■□□□□ 0.99
COL20A1-207ENST00000494913 MMP19Q99542 508 aa21.24■□□□□ 0.99
COL20A1-207ENST00000494913 TEX13BQ9BXU2 312 aa21.24■□□□□ 0.99
COL20A1-207ENST00000494913 IL25Q9H293 177 aa21.24■□□□□ 0.99
COL20A1-207ENST00000494913 TCP11L1Q9NUJ3 509 aa21.24■□□□□ 0.99
COL20A1-207ENST00000494913 COPB2P35606 906 aa21.23■□□□□ 0.99
COL20A1-207ENST00000494913 NOVP48745 357 aa21.23■□□□□ 0.99
COL20A1-207ENST00000494913 IKQ13123 557 aaPredicted RBP21.23■□□□□ 0.99
COL20A1-207ENST00000494913 CHURC1Q8WUH1 139 aa21.23■□□□□ 0.99
COL20A1-207ENST00000494913 SLC38A10Q9HBR0 1119 aa21.23■□□□□ 0.99
COL20A1-207ENST00000494913 RAVER2Q9HCJ3 691 aaKnown RBP21.23■□□□□ 0.99
COL20A1-207ENST00000494913 ATP2A1O14983 1001 aa21.22■□□□□ 0.99
COL20A1-207ENST00000494913 STAT2P52630 851 aa21.22■□□□□ 0.99
COL20A1-207ENST00000494913 KCTD2Q14681 263 aa21.22■□□□□ 0.99
COL20A1-207ENST00000494913 OLFML2BQ68BL8 750 aa21.22■□□□□ 0.99
COL20A1-207ENST00000494913 RCSD1Q6JBY9 416 aa21.22■□□□□ 0.99
COL20A1-207ENST00000494913 KCTD1Q719H9 257 aa21.22■□□□□ 0.99
COL20A1-207ENST00000494913 CTNNA3Q9UI47 895 aa21.22■□□□□ 0.99
COL20A1-207ENST00000494913 RIPK3Q9Y572 518 aa21.22■□□□□ 0.99
COL20A1-207ENST00000494913 IGHA2P01877 340 aa21.21■□□□□ 0.99
COL20A1-207ENST00000494913 NEFLP07196 543 aa21.21■□□□□ 0.99
COL20A1-207ENST00000494913 PGK2P07205 417 aa21.21■□□□□ 0.99
COL20A1-207ENST00000494913 TOP1P11387 765 aaKnown RBP21.21■□□□□ 0.99
COL20A1-207ENST00000494913 CHMLP26374 656 aa21.21■□□□□ 0.99
COL20A1-207ENST00000494913 IMMTQ16891 758 aaKnown RBP21.21■□□□□ 0.99
COL20A1-207ENST00000494913 RUFY2Q8WXA3 655 aa21.21■□□□□ 0.99
COL20A1-207ENST00000494913 ESR2Q92731 530 aa21.21■□□□□ 0.99
COL20A1-207ENST00000494913 DPF3Q92784 378 aa21.21■□□□□ 0.99
COL20A1-207ENST00000494913 PAWRQ96IZ0 340 aaKnown RBP21.21■□□□□ 0.99
COL20A1-207ENST00000494913 TMEM47Q9BQJ4 181 aa21.21■□□□□ 0.99
COL20A1-207ENST00000494913 NEDD4P46934 1319 aa21.21■□□□□ 0.99
COL20A1-207ENST00000494913 CNGA1P29973 690 aa21.2■□□□□ 0.98
COL20A1-207ENST00000494913 RASGRP2Q7LDG7 609 aa21.2■□□□□ 0.98
COL20A1-207ENST00000494913 FAM160B2Q86V87 743 aa21.2■□□□□ 0.98
COL20A1-207ENST00000494913 ANKLE1Q8NAG6 615 aa21.2■□□□□ 0.98
COL20A1-207ENST00000494913 DIS3LQ8TF46 1054 aaKnown RBP21.2■□□□□ 0.98
COL20A1-207ENST00000494913 HTATIP2Q9BUP3 242 aa21.2■□□□□ 0.98
COL20A1-207ENST00000494913 OGDHLQ9ULD0 1010 aa21.2■□□□□ 0.98
COL20A1-207ENST00000494913 ZNF236Q9UL36 1845 aa21.2■□□□□ 0.98
COL20A1-207ENST00000494913 CCDC96Q2M329 555 aa21.2■□□□□ 0.98
COL20A1-207ENST00000494913 LHX8Q68G74 356 aa21.2■□□□□ 0.98
COL20A1-207ENST00000494913 MAML3Q96JK9 1138 aa21.2■□□□□ 0.98
COL20A1-207ENST00000494913 ZNFX1Q9P2E3 1918 aaKnown RBP21.2■□□□□ 0.98
COL20A1-207ENST00000494913 PLA2G6O60733 806 aa21.19■□□□□ 0.98
COL20A1-207ENST00000494913 FDX1P10109 184 aa21.19■□□□□ 0.98
COL20A1-207ENST00000494913 OAZ1P54368 228 aa21.19■□□□□ 0.98
COL20A1-207ENST00000494913 NECAB2Q7Z6G3 386 aa21.19■□□□□ 0.98
COL20A1-207ENST00000494913 TRPV1Q8NER1 839 aa21.19■□□□□ 0.98
COL20A1-207ENST00000494913 DCAF4Q8WV16 495 aa21.19■□□□□ 0.98
COL20A1-207ENST00000494913 TTC14Q96N46 770 aa21.19■□□□□ 0.98
COL20A1-207ENST00000494913 ZKSCAN3Q9BRR0 538 aa21.19■□□□□ 0.98
COL20A1-207ENST00000494913 RAD50Q92878 1312 aa21.19■□□□□ 0.98
COL20A1-207ENST00000494913 CEP290O15078 2479 aa21.18■□□□□ 0.98
COL20A1-207ENST00000494913 KDM4AO75164 1064 aa21.18■□□□□ 0.98
COL20A1-207ENST00000494913 B4E1Z4 1266 aa21.17■□□□□ 0.98
COL20A1-207ENST00000494913 CYBAP13498 195 aa21.17■□□□□ 0.98
COL20A1-207ENST00000494913 MNX1P50219 401 aaPredicted RBP21.17■□□□□ 0.98
COL20A1-207ENST00000494913 SNAP25P60880 206 aa21.17■□□□□ 0.98
COL20A1-207ENST00000494913 ZNF792Q3KQV3 632 aa21.17■□□□□ 0.98
COL20A1-207ENST00000494913 PRAMEF19Q5SWL8 479 aa21.17■□□□□ 0.98
COL20A1-207ENST00000494913 CENPQQ7L2Z9 268 aaPredicted RBP21.17■□□□□ 0.98
COL20A1-207ENST00000494913 DDX11Q96FC9 970 aa21.17■□□□□ 0.98
COL20A1-207ENST00000494913 DDX20Q9UHI6 824 aaKnown RBP21.17■□□□□ 0.98
COL20A1-207ENST00000494913 PRR12Q9ULL5 1215 aa21.17■□□□□ 0.98
COL20A1-207ENST00000494913 TTBK2Q6IQ55 1244 aa21.16■□□□□ 0.98
COL20A1-207ENST00000494913 IQCA1Q86XH1 822 aa21.16■□□□□ 0.98
COL20A1-207ENST00000494913 CHST13Q8NET6 341 aa21.16■□□□□ 0.98
COL20A1-207ENST00000494913 AGBL1Q96MI9 1066 aa21.16■□□□□ 0.98
COL20A1-207ENST00000494913 HOMER2Q9NSB8 354 aa21.16■□□□□ 0.98
COL20A1-207ENST00000494913 FBXO40Q9UH90 709 aa21.16■□□□□ 0.98
COL20A1-207ENST00000494913 DIS3Q9Y2L1 958 aaKnown RBP21.16■□□□□ 0.98
COL20A1-207ENST00000494913 ZNF536O15090 1300 aa21.15■□□□□ 0.98
COL20A1-207ENST00000494913 FRMPD2Q68DX3 1309 aaPredicted RBP21.15■□□□□ 0.98
COL20A1-207ENST00000494913 H0YGN5 161 aa21.15■□□□□ 0.98
COL20A1-207ENST00000494913 SLC16A2P36021 539 aa21.15■□□□□ 0.98
COL20A1-207ENST00000494913 NT5C2P49902 561 aa21.15■□□□□ 0.98
COL20A1-207ENST00000494913 PTH1RQ03431 593 aa21.15■□□□□ 0.98
COL20A1-207ENST00000494913 CCDC174Q6PII3 467 aa21.15■□□□□ 0.98
COL20A1-207ENST00000494913 ANKRD35Q8N283 1001 aa21.15■□□□□ 0.98
COL20A1-207ENST00000494913 TINF2Q9BSI4 451 aa21.15■□□□□ 0.98
COL20A1-207ENST00000494913 KRT23Q9C075 422 aa21.15■□□□□ 0.98
COL20A1-207ENST00000494913 GPCPD1Q9NPB8 672 aa21.15■□□□□ 0.98
COL20A1-207ENST00000494913 ZSWIM5Q9P217 1185 aa21.15■□□□□ 0.98
COL20A1-207ENST00000494913 MSCO60682 206 aa21.14■□□□□ 0.98
COL20A1-207ENST00000494913 PDHBP11177 359 aa21.14■□□□□ 0.98
COL20A1-207ENST00000494913 CCDC178Q5BJE1 867 aa21.14■□□□□ 0.98
COL20A1-207ENST00000494913 DGKHQ86XP1 1220 aa21.14■□□□□ 0.98
COL20A1-207ENST00000494913 CNNM2Q9H8M5 875 aa21.14■□□□□ 0.98
COL20A1-207ENST00000494913 LAMA4Q16363 1823 aa21.14■□□□□ 0.98
COL20A1-207ENST00000494913 SGSM2O43147 1006 aa21.13■□□□□ 0.97
COL20A1-207ENST00000494913 BTNL9Q6UXG8 535 aa21.13■□□□□ 0.97
COL20A1-207ENST00000494913 SKAP1Q86WV1 359 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms