RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 ADD3Q9UEY8 706 aaKnown RBP12.68□□□□□ -0.38
CHMP3-209ENST00000494623 PHLPP2Q6ZVD8 1323 aa12.68□□□□□ -0.38
CHMP3-209ENST00000494623 PALM3A6NDB9 673 aaPredicted RBP12.68□□□□□ -0.38
CHMP3-209ENST00000494623 M0R2N6 131 aa12.68□□□□□ -0.38
CHMP3-209ENST00000494623 FANCGO15287 622 aa12.68□□□□□ -0.38
CHMP3-209ENST00000494623 RPN1P04843 607 aaKnown RBP12.68□□□□□ -0.38
CHMP3-209ENST00000494623 SERPINB2P05120 415 aa12.68□□□□□ -0.38
CHMP3-209ENST00000494623 ATP2B4P23634 1241 aa12.68□□□□□ -0.38
CHMP3-209ENST00000494623 GNG11P61952 73 aa12.68□□□□□ -0.38
CHMP3-209ENST00000494623 CTAGE1Q96RT6 745 aa12.68□□□□□ -0.38
CHMP3-209ENST00000494623 ZNF287Q9HBT7 754 aa12.68□□□□□ -0.38
CHMP3-209ENST00000494623 BARHL2Q9NY43 387 aa12.68□□□□□ -0.38
CHMP3-209ENST00000494623 LAMB1P07942 1786 aa12.67□□□□□ -0.38
CHMP3-209ENST00000494623 STXBP3O00186 592 aa12.67□□□□□ -0.38
CHMP3-209ENST00000494623 ZBTB22O15209 634 aa12.67□□□□□ -0.38
CHMP3-209ENST00000494623 ST5P78524 1137 aa12.67□□□□□ -0.38
CHMP3-209ENST00000494623 USP17L2Q6R6M4 530 aa12.67□□□□□ -0.38
CHMP3-209ENST00000494623 ZNF397Q8NF99 534 aaPredicted RBP12.67□□□□□ -0.38
CHMP3-209ENST00000494623 CCDC148Q8NFR7 591 aa12.67□□□□□ -0.38
CHMP3-209ENST00000494623 RBM17Q96I25 401 aaKnown RBP12.67□□□□□ -0.38
CHMP3-209ENST00000494623 GJD4Q96KN9 370 aaPredicted RBP12.67□□□□□ -0.38
CHMP3-209ENST00000494623 VPS16Q9H269 839 aa12.67□□□□□ -0.38
CHMP3-209ENST00000494623 GDAQ9Y2T3 454 aa12.67□□□□□ -0.38
CHMP3-209ENST00000494623 GPR75-ASB3A0A0A6YYF3 556 aa12.67□□□□□ -0.38
CHMP3-209ENST00000494623 SOWAHDA6NJG2 315 aa12.67□□□□□ -0.38
CHMP3-209ENST00000494623 C6orf229H3BNL8 230 aa12.67□□□□□ -0.38
CHMP3-209ENST00000494623 UBA7P41226 1012 aa12.67□□□□□ -0.38
CHMP3-209ENST00000494623 MFSD14BQ5SR56 506 aa12.67□□□□□ -0.38
CHMP3-209ENST00000494623 NELFBQ8WX92 580 aa12.67□□□□□ -0.38
CHMP3-209ENST00000494623 FEZ1Q99689 392 aa12.67□□□□□ -0.38
CHMP3-209ENST00000494623 ROBO3Q96MS0 1386 aa12.66□□□□□ -0.38
CHMP3-209ENST00000494623 GYS1P13807 737 aa12.66□□□□□ -0.38
CHMP3-209ENST00000494623 CASQ1P31415 396 aa12.66□□□□□ -0.38
CHMP3-209ENST00000494623 NT5C2P49902 561 aa12.66□□□□□ -0.38
CHMP3-209ENST00000494623 NAPAP54920 295 aa12.66□□□□□ -0.38
CHMP3-209ENST00000494623 PAK1Q13153 545 aa12.66□□□□□ -0.38
CHMP3-209ENST00000494623 ZNF658Q5TYW1 1059 aaPredicted RBP12.66□□□□□ -0.38
CHMP3-209ENST00000494623 MEX3CQ5U5Q3 659 aaKnown RBP12.66□□□□□ -0.38
CHMP3-209ENST00000494623 FBXO38Q6PIJ6 1188 aa12.66□□□□□ -0.38
CHMP3-209ENST00000494623 C15orf52Q6ZUT6 534 aaKnown RBP12.66□□□□□ -0.38
CHMP3-209ENST00000494623 POLLQ9UGP5 575 aa12.66□□□□□ -0.38
CHMP3-209ENST00000494623 RWDD2AQ9UIY3 292 aa12.66□□□□□ -0.38
CHMP3-209ENST00000494623 N4BP3O15049 544 aa12.66□□□□□ -0.38
CHMP3-209ENST00000494623 IGSF3O75054 1194 aa12.66□□□□□ -0.38
CHMP3-209ENST00000494623 PARP1P09874 1014 aaKnown RBP12.66□□□□□ -0.38
CHMP3-209ENST00000494623 IL1R1P14778 569 aa12.66□□□□□ -0.38
CHMP3-209ENST00000494623 CASP14P31944 242 aa12.66□□□□□ -0.38
CHMP3-209ENST00000494623 PRCPP42785 496 aa12.66□□□□□ -0.38
CHMP3-209ENST00000494623 KRT31Q15323 416 aa12.66□□□□□ -0.38
CHMP3-209ENST00000494623 WDR24Q96S15 920 aa12.66□□□□□ -0.38
CHMP3-209ENST00000494623 DISC1Q9NRI5 854 aa12.66□□□□□ -0.38
CHMP3-209ENST00000494623 RMND1Q9NWS8 449 aa12.66□□□□□ -0.38
CHMP3-209ENST00000494623 SMCO2A6NFE2 343 aa12.65□□□□□ -0.38
CHMP3-209ENST00000494623 PBX1P40424 430 aa12.65□□□□□ -0.38
CHMP3-209ENST00000494623 GALNT17Q6IS24 598 aa12.65□□□□□ -0.38
CHMP3-209ENST00000494623 C16orf86Q6ZW13 317 aa12.65□□□□□ -0.38
CHMP3-209ENST00000494623 NEDD1Q8NHV4 660 aa12.65□□□□□ -0.38
CHMP3-209ENST00000494623 TBC1D16Q8TBP0 767 aa12.65□□□□□ -0.38
CHMP3-209ENST00000494623 PANX2Q96RD6 677 aa12.65□□□□□ -0.38
CHMP3-209ENST00000494623 LZTS2Q9BRK4 669 aa12.65□□□□□ -0.38
CHMP3-209ENST00000494623 UBA5Q9GZZ9 404 aa12.65□□□□□ -0.38
CHMP3-209ENST00000494623 TAB2Q9NYJ8 693 aa12.65□□□□□ -0.38
CHMP3-209ENST00000494623 OGFRQ9NZT2 677 aa12.65□□□□□ -0.38
CHMP3-209ENST00000494623 FLT1P17948 1338 aa12.65□□□□□ -0.38
CHMP3-209ENST00000494623 MAST2Q6P0Q8 1798 aa12.65□□□□□ -0.38
CHMP3-209ENST00000494623 GOLGA6L9A6NEM1 432 aa12.65□□□□□ -0.38
CHMP3-209ENST00000494623 RIMBP2O15034 1052 aa12.65□□□□□ -0.38
CHMP3-209ENST00000494623 LETM2Q2VYF4 491 aa12.65□□□□□ -0.38
CHMP3-209ENST00000494623 NAALADL2Q58DX5 795 aa12.65□□□□□ -0.38
CHMP3-209ENST00000494623 RAD9BQ6WBX8 426 aa12.65□□□□□ -0.38
CHMP3-209ENST00000494623 MNS1Q8NEH6 495 aa12.65□□□□□ -0.38
CHMP3-209ENST00000494623 CEP95Q96GE4 821 aa12.65□□□□□ -0.38
CHMP3-209ENST00000494623 CARD6Q9BX69 1037 aa12.65□□□□□ -0.38
CHMP3-209ENST00000494623 CCNT1O60563 726 aaKnown RBP12.64□□□□□ -0.39
CHMP3-209ENST00000494623 BBOX1O75936 387 aa12.64□□□□□ -0.39
CHMP3-209ENST00000494623 RHBDL3P58872 404 aa12.64□□□□□ -0.39
CHMP3-209ENST00000494623 CRY2Q49AN0 593 aa12.64□□□□□ -0.39
CHMP3-209ENST00000494623 SMAP1Q8IYB5 467 aaPredicted RBP12.64□□□□□ -0.39
CHMP3-209ENST00000494623 DAGLBQ8NCG7 672 aa12.64□□□□□ -0.39
CHMP3-209ENST00000494623 CERKQ8TCT0 537 aa12.64□□□□□ -0.39
CHMP3-209ENST00000494623 LZTFL1Q9NQ48 299 aa12.64□□□□□ -0.39
CHMP3-209ENST00000494623 LIMA1Q9UHB6 759 aaKnown RBP12.64□□□□□ -0.39
CHMP3-209ENST00000494623 DDX41Q9UJV9 622 aaKnown RBP12.64□□□□□ -0.39
CHMP3-209ENST00000494623 PARP3Q9Y6F1 533 aa12.64□□□□□ -0.39
CHMP3-209ENST00000494623 KCNJ18B7U540 433 aa12.64□□□□□ -0.39
CHMP3-209ENST00000494623 F8W031 263 aaPredicted RBP12.64□□□□□ -0.39
CHMP3-209ENST00000494623 PLCG2P16885 1265 aa12.64□□□□□ -0.39
CHMP3-209ENST00000494623 ADRA2BP18089 450 aa12.64□□□□□ -0.39
CHMP3-209ENST00000494623 FXR1P51114 621 aaKnown RBP eCLIP12.64□□□□□ -0.39
CHMP3-209ENST00000494623 GTF2IP78347 998 aa12.64□□□□□ -0.39
CHMP3-209ENST00000494623 PICALMQ13492 652 aa12.64□□□□□ -0.39
CHMP3-209ENST00000494623 KCNJ12Q14500 433 aa12.64□□□□□ -0.39
CHMP3-209ENST00000494623 ARHGAP29Q52LW3 1261 aa12.64□□□□□ -0.39
CHMP3-209ENST00000494623 TCP11X2Q5H9J9 407 aa12.64□□□□□ -0.39
CHMP3-209ENST00000494623 SEPT12Q8IYM1 358 aa12.64□□□□□ -0.39
CHMP3-209ENST00000494623 UBXN4Q92575 508 aa12.64□□□□□ -0.39
CHMP3-209ENST00000494623 RRP36Q96EU6 259 aaKnown RBP12.64□□□□□ -0.39
CHMP3-209ENST00000494623 IRX2Q9BZI1 471 aaPredicted RBP12.64□□□□□ -0.39
CHMP3-209ENST00000494623 MRPL44Q9H9J2 332 aaKnown RBP12.64□□□□□ -0.39
CHMP3-209ENST00000494623 TRIM49BA6NDI0 452 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms