RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 ABHD8Q96I13 439 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 CLMNQ96JQ2 1002 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 SH3GL2Q99962 352 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 UBA5Q9GZZ9 404 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 GOLPH3LQ9H4A5 285 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 SENP2Q9HC62 589 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 PLCB1Q9NQ66 1216 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 ARHGEF38Q9NXL2 777 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 FAM184BQ9ULE4 1060 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 PRELID1Q9Y255 219 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 WDR37Q9Y2I8 494 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 R3HDM2Q9Y2K5 976 aaKnown RBP4.48□□□□□ -1.69
ATG3-207ENST00000494571 ATP8A1Q9Y2Q0 1164 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 ADGBQ8N7X0 1667 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 ITIH6Q6UXX5 1313 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 ATXN2Q99700 1313 aaKnown RBP4.48□□□□□ -1.69
ATG3-207ENST00000494571 CEP170BQ9Y4F5 1589 aaPredicted RBP4.48□□□□□ -1.69
ATG3-207ENST00000494571 TMEM110-MUSTN1A8MSY1 372 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 RAD21O60216 631 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 CSPG5O95196 566 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 PYGMP11217 842 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 ZFXP17010 805 aaPredicted RBP4.48□□□□□ -1.69
ATG3-207ENST00000494571 HOXD12P35452 270 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 FLT3P36888 993 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 SARSP49591 514 aaKnown RBP4.48□□□□□ -1.69
ATG3-207ENST00000494571 GUCY2DQ02846 1103 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 ITGA7Q13683 1181 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 QPCTQ16769 361 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 SLC44A4Q53GD3 710 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 GKAP1Q5VSY0 366 aaPredicted RBP4.48□□□□□ -1.69
ATG3-207ENST00000494571 FAM117BQ6P1L5 589 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 CPLX4Q7Z7G2 160 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 IFNLR1Q8IU57 520 aaPredicted RBP4.48□□□□□ -1.69
ATG3-207ENST00000494571 SLC15A3Q8IY34 581 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 PROM2Q8N271 834 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 KIF2BQ8N4N8 673 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.48□□□□□ -1.69
ATG3-207ENST00000494571 KIFAP3Q92845 792 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 ZMAT2Q96NC0 199 aaKnown RBP4.48□□□□□ -1.69
ATG3-207ENST00000494571 NAPGQ99747 312 aaPredicted RBP4.48□□□□□ -1.69
ATG3-207ENST00000494571 OXCT2Q9BYC2 517 aaPredicted RBP4.48□□□□□ -1.69
ATG3-207ENST00000494571 IL25Q9H293 177 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 DCTPP1Q9H773 170 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.48□□□□□ -1.69
ATG3-207ENST00000494571 ZNF777Q9ULD5 760 aaPredicted RBP4.48□□□□□ -1.69
ATG3-207ENST00000494571 ZC3H4Q9UPT8 1303 aaKnown RBP4.48□□□□□ -1.69
ATG3-207ENST00000494571 YTHDC2Q9H6S0 1430 aaKnown RBP4.48□□□□□ -1.69
ATG3-207ENST00000494571 SIGLEC1Q9BZZ2 1709 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 PALM3A6NDB9 673 aaPredicted RBP4.48□□□□□ -1.69
ATG3-207ENST00000494571 TMEM221A6NGB7 291 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 BOLA2-SMG1P6H3BVE0 249 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 FAM107AO95990 144 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 ATP2A2P16615 1042 aaKnown RBP4.48□□□□□ -1.69
ATG3-207ENST00000494571 NR1D1P20393 614 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 GSTT1P30711 240 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 STIP1P31948 543 aaKnown RBP4.48□□□□□ -1.69
ATG3-207ENST00000494571 PSMD7P51665 324 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 USP11P51784 963 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 USP14P54578 494 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 PLOD1Q02809 727 aaPredicted RBP4.48□□□□□ -1.69
ATG3-207ENST00000494571 NSUN2Q08J23 767 aaKnown RBP eCLIP4.48□□□□□ -1.69
ATG3-207ENST00000494571 PABPC4Q13310 644 aaKnown RBP eCLIP4.48□□□□□ -1.696e-7■■■□□ 15.9
ATG3-207ENST00000494571 XRCC4Q13426 336 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 DRP2Q13474 957 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 SLMAPQ14BN4 828 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 PKN1Q16512 942 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 DDB1Q16531 1140 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 FXNQ16595 210 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 KRT24Q2M2I5 525 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 THOC7Q6I9Y2 204 aaKnown RBP4.48□□□□□ -1.69
ATG3-207ENST00000494571 ANO7Q6IWH7 933 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 GIGYF2Q6Y7W6 1299 aaKnown RBP4.48□□□□□ -1.69
ATG3-207ENST00000494571 ILDR2Q71H61 639 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 KRT27Q7Z3Y8 459 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 MAATS1Q7Z4T9 603 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 TTC30BQ8N4P2 665 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 NBPF15Q8N660 670 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 ZNF713Q8N859 430 aaPredicted RBP4.48□□□□□ -1.69
ATG3-207ENST00000494571 SMYD1Q8NB12 490 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 SLC17A8Q8NDX2 589 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 IWS1Q96ST2 819 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 LBHD1Q9BQE6 289 aaPredicted RBP4.48□□□□□ -1.69
ATG3-207ENST00000494571 SIKE1Q9BRV8 207 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 PFDN4Q9NQP4 134 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 PNMA2Q9UL42 364 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 SPG7Q9UQ90 795 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 PLAAQ9Y263 795 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 LEMD3Q9Y2U8 911 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 NWD1Q149M9 1564 aa4.47□□□□□ -1.69
ATG3-207ENST00000494571 TTC21AQ8NDW8 1320 aa4.47□□□□□ -1.69
ATG3-207ENST00000494571 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.47□□□□□ -1.69
ATG3-207ENST00000494571 TTLL13PA6NNM8 815 aa4.47□□□□□ -1.69
ATG3-207ENST00000494571 PHF20L1A8MW92 1017 aa4.47□□□□□ -1.69
ATG3-207ENST00000494571 SPTLC1O15269 473 aa4.47□□□□□ -1.69
ATG3-207ENST00000494571 FGFR1OPO95684 399 aaKnown RBP4.47□□□□□ -1.69
ATG3-207ENST00000494571 SP100P23497 879 aaPredicted RBP4.47□□□□□ -1.69
ATG3-207ENST00000494571 TMOD1P28289 359 aa4.47□□□□□ -1.69
ATG3-207ENST00000494571 PRKAR2BP31323 418 aa4.47□□□□□ -1.69
ATG3-207ENST00000494571 PDE1AP54750 535 aa4.47□□□□□ -1.69
ATG3-207ENST00000494571 OXCT1P55809 520 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms