RNA–Protein interactions for RNA: ENST00000494065.2

DEPDC5-220, Transcript of DEP domain containing 5, humanhuman

TSL 3

Gene DEPDC5, Length 414 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC5-220ENST00000494065 LRRCC1Q9C099 1032 aa9.69□□□□□ -0.86
DEPDC5-220ENST00000494065 ZNF532Q9HCE3 1301 aa9.69□□□□□ -0.86
DEPDC5-220ENST00000494065 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.69□□□□□ -0.86
DEPDC5-220ENST00000494065 MKI67P46013 3256 aaKnown RBP9.68□□□□□ -0.86
DEPDC5-220ENST00000494065 FARP2O94887 1054 aaPredicted RBP9.68□□□□□ -0.86
DEPDC5-220ENST00000494065 S1PR4O95977 384 aa9.68□□□□□ -0.86
DEPDC5-220ENST00000494065 ELNP15502 786 aa9.68□□□□□ -0.86
DEPDC5-220ENST00000494065 JUNDP17535 347 aa9.68□□□□□ -0.86
DEPDC5-220ENST00000494065 MAPK4P31152 587 aa9.68□□□□□ -0.86
DEPDC5-220ENST00000494065 RAB3GAP1Q15042 981 aa9.68□□□□□ -0.86
DEPDC5-220ENST00000494065 CSPP1Q1MSJ5 1256 aa9.68□□□□□ -0.86
DEPDC5-220ENST00000494065 CERKLQ49MI3 558 aaPredicted RBP9.68□□□□□ -0.86
DEPDC5-220ENST00000494065 ZSCAN25Q6NSZ9 544 aa9.68□□□□□ -0.86
DEPDC5-220ENST00000494065 CCAR1Q8IX12 1150 aaKnown RBP9.68□□□□□ -0.86
DEPDC5-220ENST00000494065 TRMT44Q8IYL2 757 aaKnown RBP9.68□□□□□ -0.86
DEPDC5-220ENST00000494065 GPRC5AQ8NFJ5 357 aa9.68□□□□□ -0.86
DEPDC5-220ENST00000494065 PRR7Q8TB68 274 aa9.68□□□□□ -0.86
DEPDC5-220ENST00000494065 U2AF1L4Q8WU68 220 aaKnown RBP9.68□□□□□ -0.86
DEPDC5-220ENST00000494065 HAUS7Q99871 368 aa9.68□□□□□ -0.86
DEPDC5-220ENST00000494065 KIAA1683Q9H0B3 1180 aa9.68□□□□□ -0.86
DEPDC5-220ENST00000494065 UNC93B1Q9H1C4 597 aa9.68□□□□□ -0.86
DEPDC5-220ENST00000494065 CWC22Q9HCG8 908 aaKnown RBP9.68□□□□□ -0.86
DEPDC5-220ENST00000494065 MCM9Q9NXL9 1143 aa9.68□□□□□ -0.86
DEPDC5-220ENST00000494065 SWAP70Q9UH65 585 aa9.68□□□□□ -0.86
DEPDC5-220ENST00000494065 TCRBV5S4A2TA0A5A2 114 aa9.67□□□□□ -0.86
DEPDC5-220ENST00000494065 USP17L15C9J2P7 530 aa9.67□□□□□ -0.86
DEPDC5-220ENST00000494065 USP17L13C9JLJ4 530 aa9.67□□□□□ -0.86
DEPDC5-220ENST00000494065 USP17L11C9JVI0 530 aa9.67□□□□□ -0.86
DEPDC5-220ENST00000494065 USP17L18D6R9N7 530 aa9.67□□□□□ -0.86
DEPDC5-220ENST00000494065 USP17L22D6RA61 530 aa9.67□□□□□ -0.86
DEPDC5-220ENST00000494065 USP17L17D6RBQ6 530 aa9.67□□□□□ -0.86
DEPDC5-220ENST00000494065 USP17L19D6RCP7 530 aa9.67□□□□□ -0.86
DEPDC5-220ENST00000494065 CFAP99D6REC4 459 aa9.67□□□□□ -0.86
DEPDC5-220ENST00000494065 USP17L20D6RJB6 530 aa9.67□□□□□ -0.86
DEPDC5-220ENST00000494065 MBD4O95243 580 aa9.67□□□□□ -0.86
DEPDC5-220ENST00000494065 SHMT1P34896 483 aa9.67□□□□□ -0.86
DEPDC5-220ENST00000494065 ADD2P35612 726 aa9.67□□□□□ -0.86
DEPDC5-220ENST00000494065 ERVK-9P63128 1117 aa9.67□□□□□ -0.86
DEPDC5-220ENST00000494065 ERVK-24P63145 666 aa9.67□□□□□ -0.86
DEPDC5-220ENST00000494065 CCNA1P78396 465 aa9.67□□□□□ -0.86
DEPDC5-220ENST00000494065 JAG1P78504 1218 aa9.67□□□□□ -0.86
DEPDC5-220ENST00000494065 USP17L24Q0WX57 530 aa9.67□□□□□ -0.86
DEPDC5-220ENST00000494065 SHROOM1Q2M3G4 852 aaPredicted RBP9.67□□□□□ -0.86
DEPDC5-220ENST00000494065 LCORLQ8N3X6 602 aa9.67□□□□□ -0.86
DEPDC5-220ENST00000494065 ANKLE1Q8NAG6 615 aa9.67□□□□□ -0.86
DEPDC5-220ENST00000494065 NUDT12Q9BQG2 462 aa9.67□□□□□ -0.86
DEPDC5-220ENST00000494065 SH2D4AQ9H788 454 aa9.67□□□□□ -0.86
DEPDC5-220ENST00000494065 ATP8A2Q9NTI2 1148 aa9.67□□□□□ -0.86
DEPDC5-220ENST00000494065 A0A0G2JMZ2 1700 aa9.67□□□□□ -0.86
DEPDC5-220ENST00000494065 ZNF236Q9UL36 1845 aa9.66□□□□□ -0.86
DEPDC5-220ENST00000494065 GLRX3O76003 335 aaKnown RBP9.66□□□□□ -0.86
DEPDC5-220ENST00000494065 VCAM1P19320 739 aa9.66□□□□□ -0.86
DEPDC5-220ENST00000494065 GABPAQ06546 454 aa9.66□□□□□ -0.86
DEPDC5-220ENST00000494065 UBE3CQ15386 1083 aa9.66□□□□□ -0.86
DEPDC5-220ENST00000494065 ZYXQ15942 572 aaKnown RBP9.66□□□□□ -0.86
DEPDC5-220ENST00000494065 TMEM179Q6ZVK1 233 aa9.66□□□□□ -0.86
DEPDC5-220ENST00000494065 P2RX7Q99572 595 aaKnown RBP9.66□□□□□ -0.86
DEPDC5-220ENST00000494065 APBA2Q99767 749 aa9.66□□□□□ -0.86
DEPDC5-220ENST00000494065 PAGR1Q9BTK6 254 aa9.66□□□□□ -0.86
DEPDC5-220ENST00000494065 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.66□□□□□ -0.86
DEPDC5-220ENST00000494065 BCL11AQ9H165 835 aa9.66□□□□□ -0.86
DEPDC5-220ENST00000494065 BOLA2Q9H3K6 86 aa9.66□□□□□ -0.86
DEPDC5-220ENST00000494065 DCP1AQ9NPI6 582 aaPredicted RBP9.66□□□□□ -0.86
DEPDC5-220ENST00000494065 PAK6Q9NQU5 681 aaPredicted RBP9.66□□□□□ -0.86
DEPDC5-220ENST00000494065 PRDM9Q9NQV7 894 aa9.66□□□□□ -0.86
DEPDC5-220ENST00000494065 RABGAP1Q9Y3P9 1069 aa9.66□□□□□ -0.86
DEPDC5-220ENST00000494065 PLXNB2O15031 1838 aa9.66□□□□□ -0.86
DEPDC5-220ENST00000494065 RNF223E7ERA6 249 aa9.65□□□□□ -0.86
DEPDC5-220ENST00000494065 MPHOSPH10O00566 681 aaKnown RBP9.65□□□□□ -0.86
DEPDC5-220ENST00000494065 RGS20O76081 388 aa9.65□□□□□ -0.86
DEPDC5-220ENST00000494065 SGPL1O95470 568 aa9.65□□□□□ -0.86
DEPDC5-220ENST00000494065 XRCC5P13010 732 aaKnown RBP9.65□□□□□ -0.86
DEPDC5-220ENST00000494065 ZKSCAN1P17029 563 aaPredicted RBP9.65□□□□□ -0.86
DEPDC5-220ENST00000494065 RGS2P41220 211 aa9.65□□□□□ -0.86
DEPDC5-220ENST00000494065 PLCD1P51178 756 aa9.65□□□□□ -0.86
DEPDC5-220ENST00000494065 PTPRNQ16849 979 aa9.65□□□□□ -0.86
DEPDC5-220ENST00000494065 LRRFIP1Q32MZ4 808 aaKnown RBP9.65□□□□□ -0.86
DEPDC5-220ENST00000494065 C20orf194Q5TEA3 1177 aa9.65□□□□□ -0.86
DEPDC5-220ENST00000494065 B4GALNT3Q6L9W6 998 aa9.65□□□□□ -0.86
DEPDC5-220ENST00000494065 LBX2Q6XYB7 198 aa9.65□□□□□ -0.86
DEPDC5-220ENST00000494065 UBE2Q1Q7Z7E8 422 aa9.65□□□□□ -0.86
DEPDC5-220ENST00000494065 SDR42E1Q8WUS8 393 aa9.65□□□□□ -0.86
DEPDC5-220ENST00000494065 EDC3Q96F86 508 aaKnown RBP9.65□□□□□ -0.86
DEPDC5-220ENST00000494065 DEFB118Q96PH6 123 aa9.65□□□□□ -0.86
DEPDC5-220ENST00000494065 ARMT1Q9H993 441 aa9.65□□□□□ -0.86
DEPDC5-220ENST00000494065 ARHGEF10LQ9HCE6 1279 aa9.65□□□□□ -0.86
DEPDC5-220ENST00000494065 TXNRD2Q9NNW7 524 aa9.65□□□□□ -0.86
DEPDC5-220ENST00000494065 ECHDC1Q9NTX5 307 aa9.65□□□□□ -0.86
DEPDC5-220ENST00000494065 BAZ2AQ9UIF9 1905 aaKnown RBP9.64□□□□□ -0.87
DEPDC5-220ENST00000494065 RPTORQ8N122 1335 aa9.64□□□□□ -0.87
DEPDC5-220ENST00000494065 ICA1Q05084 483 aa9.64□□□□□ -0.87
DEPDC5-220ENST00000494065 SEPT2Q15019 361 aa9.64□□□□□ -0.87
DEPDC5-220ENST00000494065 HABP4Q5JVS0 413 aaKnown RBP9.64□□□□□ -0.87
DEPDC5-220ENST00000494065 GPR142Q7Z601 462 aa9.64□□□□□ -0.87
DEPDC5-220ENST00000494065 PLEKHH3Q7Z736 793 aa9.64□□□□□ -0.87
DEPDC5-220ENST00000494065 LPAR1Q92633 364 aa9.64□□□□□ -0.87
DEPDC5-220ENST00000494065 CCDC17Q96LX7 622 aa9.64□□□□□ -0.87
DEPDC5-220ENST00000494065 RPAP3Q9H6T3 665 aaPredicted RBP9.64□□□□□ -0.87
DEPDC5-220ENST00000494065 HMX1Q9NP08 348 aaPredicted RBP9.64□□□□□ -0.87
DEPDC5-220ENST00000494065 ARPP21Q9UBL0 812 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms