RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 TTLL11Q8NHH1 800 aa7.17□□□□□ -1.26
CPSF7-213ENST00000494016 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.17□□□□□ -1.26
CPSF7-213ENST00000494016 EDEM1Q92611 657 aa7.17□□□□□ -1.26
CPSF7-213ENST00000494016 SYTL4Q96C24 671 aaPredicted RBP7.17□□□□□ -1.26
CPSF7-213ENST00000494016 SEC62Q99442 399 aaKnown RBP7.17□□□□□ -1.26
CPSF7-213ENST00000494016 ALDH8A1Q9H2A2 487 aaPredicted RBP7.17□□□□□ -1.26
CPSF7-213ENST00000494016 LIMCH1Q9UPQ0 1083 aa7.17□□□□□ -1.26
CPSF7-213ENST00000494016 FNDC3AQ9Y2H6 1198 aaKnown RBP7.17□□□□□ -1.26
CPSF7-213ENST00000494016 RIPOR2Q9Y4F9 1068 aa7.17□□□□□ -1.26
CPSF7-213ENST00000494016 ANKRD36CQ5JPF3 1778 aa7.17□□□□□ -1.26
CPSF7-213ENST00000494016 A0A1B0GUL7 405 aa7.16□□□□□ -1.26
CPSF7-213ENST00000494016 SOWAHDA6NJG2 315 aa7.16□□□□□ -1.26
CPSF7-213ENST00000494016 FZD6O60353 706 aa7.16□□□□□ -1.26
CPSF7-213ENST00000494016 RPLP1P05386 114 aaKnown RBP7.16□□□□□ -1.26
CPSF7-213ENST00000494016 PTMSP20962 102 aa7.16□□□□□ -1.26
CPSF7-213ENST00000494016 GPTP24298 496 aa7.16□□□□□ -1.26
CPSF7-213ENST00000494016 ADORA1P30542 326 aa7.16□□□□□ -1.26
CPSF7-213ENST00000494016 ARHGAP4P98171 946 aa7.16□□□□□ -1.26
CPSF7-213ENST00000494016 DNM1Q05193 864 aaKnown RBP7.16□□□□□ -1.26
CPSF7-213ENST00000494016 ITPK1Q13572 414 aa7.16□□□□□ -1.26
CPSF7-213ENST00000494016 CCDC57Q2TAC2 916 aa7.16□□□□□ -1.26
CPSF7-213ENST00000494016 MCMDC2Q4G0Z9 681 aa7.16□□□□□ -1.26
CPSF7-213ENST00000494016 HSP90AB3PQ58FF7 597 aa7.16□□□□□ -1.26
CPSF7-213ENST00000494016 VPS53Q5VIR6 699 aa7.16□□□□□ -1.26
CPSF7-213ENST00000494016 NOL8Q76FK4 1167 aaKnown RBP7.16□□□□□ -1.26
CPSF7-213ENST00000494016 KRT25Q7Z3Z0 450 aa7.16□□□□□ -1.26
CPSF7-213ENST00000494016 TICAM2Q86XR7 235 aa7.16□□□□□ -1.26
CPSF7-213ENST00000494016 KBTBD3Q8NAB2 608 aa7.16□□□□□ -1.26
CPSF7-213ENST00000494016 ACSBG1Q96GR2 724 aa7.16□□□□□ -1.26
CPSF7-213ENST00000494016 BTBD6Q96KE9 485 aa7.16□□□□□ -1.26
CPSF7-213ENST00000494016 JAKMIP1Q96N16 626 aaKnown RBP7.16□□□□□ -1.26
CPSF7-213ENST00000494016 DNAJC2Q99543 621 aaKnown RBP7.16□□□□□ -1.26
CPSF7-213ENST00000494016 PDRG1Q9NUG6 133 aa7.16□□□□□ -1.26
CPSF7-213ENST00000494016 TAF6LQ9Y6J9 622 aa7.16□□□□□ -1.26
CPSF7-213ENST00000494016 RFX7Q2KHR2 1363 aa7.16□□□□□ -1.26
CPSF7-213ENST00000494016 ZNF609O15014 1411 aa7.16□□□□□ -1.26
CPSF7-213ENST00000494016 LY75O60449 1722 aa7.15□□□□□ -1.26
CPSF7-213ENST00000494016 IRS4O14654 1257 aaPredicted RBP7.15□□□□□ -1.26
CPSF7-213ENST00000494016 LARGE1O95461 756 aa7.15□□□□□ -1.26
CPSF7-213ENST00000494016 RARAP10276 462 aa7.15□□□□□ -1.26
CPSF7-213ENST00000494016 PCSK2P16519 638 aa7.15□□□□□ -1.26
CPSF7-213ENST00000494016 CASTP20810 708 aaKnown RBP7.15□□□□□ -1.26
CPSF7-213ENST00000494016 ADH7P40394 386 aa7.15□□□□□ -1.26
CPSF7-213ENST00000494016 ZMYM1Q5SVZ6 1142 aa7.15□□□□□ -1.26
CPSF7-213ENST00000494016 SUSD4Q5VX71 490 aa7.15□□□□□ -1.26
CPSF7-213ENST00000494016 MCTP1Q6DN14 999 aa7.15□□□□□ -1.26
CPSF7-213ENST00000494016 SCARF2Q96GP6 870 aaPredicted RBP7.15□□□□□ -1.26
CPSF7-213ENST00000494016 CHAMP1Q96JM3 812 aa7.15□□□□□ -1.26
CPSF7-213ENST00000494016 KRTAP9-2Q9BYQ4 174 aa7.15□□□□□ -1.26
CPSF7-213ENST00000494016 HELLSQ9NRZ9 838 aa7.15□□□□□ -1.26
CPSF7-213ENST00000494016 CCDC87Q9NVE4 849 aa7.15□□□□□ -1.26
CPSF7-213ENST00000494016 PAG1Q9NWQ8 432 aa7.15□□□□□ -1.26
CPSF7-213ENST00000494016 TRMT112Q9UI30 125 aaKnown RBP7.15□□□□□ -1.26
CPSF7-213ENST00000494016 CYP46A1Q9Y6A2 500 aa7.15□□□□□ -1.26
CPSF7-213ENST00000494016 IVNS1ABPQ9Y6Y0 642 aa7.15□□□□□ -1.26
CPSF7-213ENST00000494016 UBN2Q6ZU65 1347 aa7.15□□□□□ -1.26
CPSF7-213ENST00000494016 RPAP1Q9BWH6 1393 aaPredicted RBP7.15□□□□□ -1.26
CPSF7-213ENST00000494016 MYH14Q7Z406 1995 aaKnown RBP7.15□□□□□ -1.27
CPSF7-213ENST00000494016 LOC102724428A0A0B4J2F2 783 aa7.14□□□□□ -1.27
CPSF7-213ENST00000494016 GOLIM4O00461 696 aa7.14□□□□□ -1.27
CPSF7-213ENST00000494016 PDE8AO60658 829 aa7.14□□□□□ -1.27
CPSF7-213ENST00000494016 CAMTA2O94983 1202 aa7.14□□□□□ -1.27
CPSF7-213ENST00000494016 IFIT1P09914 478 aaKnown RBP7.14□□□□□ -1.27
CPSF7-213ENST00000494016 MYH3P11055 1940 aa7.14□□□□□ -1.27
CPSF7-213ENST00000494016 XRCC6P12956 609 aaKnown RBP eCLIP7.14□□□□□ -1.27
CPSF7-213ENST00000494016 RPS6KB1P23443 525 aa7.14□□□□□ -1.27
CPSF7-213ENST00000494016 CRKLP46109 303 aaKnown RBP7.14□□□□□ -1.27
CPSF7-213ENST00000494016 KCNJ4P48050 445 aa7.14□□□□□ -1.27
CPSF7-213ENST00000494016 CTSWP56202 376 aa7.14□□□□□ -1.27
CPSF7-213ENST00000494016 SIK1P57059 783 aa7.14□□□□□ -1.27
CPSF7-213ENST00000494016 ST3GAL1Q11201 340 aa7.14□□□□□ -1.27
CPSF7-213ENST00000494016 IFIT5Q13325 482 aaKnown RBP7.14□□□□□ -1.27
CPSF7-213ENST00000494016 ME3Q16798 604 aa7.14□□□□□ -1.27
CPSF7-213ENST00000494016 QSER1Q2KHR3 1735 aa7.14□□□□□ -1.27
CPSF7-213ENST00000494016 PDE12Q6L8Q7 609 aaKnown RBP7.14□□□□□ -1.27
CPSF7-213ENST00000494016 CCDC129Q6ZRS4 1044 aa7.14□□□□□ -1.27
CPSF7-213ENST00000494016 DDX46Q7L014 1031 aaKnown RBP7.14□□□□□ -1.27
CPSF7-213ENST00000494016 GAS2L3Q86XJ1 694 aa7.14□□□□□ -1.27
CPSF7-213ENST00000494016 VGLL2Q8N8G2 317 aa7.14□□□□□ -1.27
CPSF7-213ENST00000494016 NEDD1Q8NHV4 660 aa7.14□□□□□ -1.27
CPSF7-213ENST00000494016 SH3TC1Q8TE82 1336 aa7.14□□□□□ -1.27
CPSF7-213ENST00000494016 PALLDQ8WX93 1383 aa7.14□□□□□ -1.27
CPSF7-213ENST00000494016 ZSCAN31Q96LW9 406 aaPredicted RBP7.14□□□□□ -1.27
CPSF7-213ENST00000494016 GREM2Q9H772 168 aa7.14□□□□□ -1.27
CPSF7-213ENST00000494016 DNAJB12Q9NXW2 375 aaKnown RBP7.14□□□□□ -1.27
CPSF7-213ENST00000494016 POLIQ9UNA4 740 aa7.14□□□□□ -1.27
CPSF7-213ENST00000494016 AKAP2Q9Y2D5 859 aa7.14□□□□□ -1.27
CPSF7-213ENST00000494016 CICQ96RK0 1608 aaPredicted RBP7.13□□□□□ -1.27
CPSF7-213ENST00000494016 ANKRD18BA2A2Z9 1011 aa7.13□□□□□ -1.27
CPSF7-213ENST00000494016 RNF113AO15541 343 aaKnown RBP7.13□□□□□ -1.27
CPSF7-213ENST00000494016 MMP20O60882 483 aa7.13□□□□□ -1.27
CPSF7-213ENST00000494016 PRPF40AO75400 957 aaKnown RBP7.13□□□□□ -1.27
CPSF7-213ENST00000494016 ZKSCAN1P17029 563 aaPredicted RBP7.13□□□□□ -1.27
CPSF7-213ENST00000494016 HOXB4P17483 251 aaPredicted RBP7.13□□□□□ -1.27
CPSF7-213ENST00000494016 ALAS2P22557 587 aa7.13□□□□□ -1.27
CPSF7-213ENST00000494016 PSMA5P28066 241 aa7.13□□□□□ -1.27
CPSF7-213ENST00000494016 USP5P45974 858 aa7.13□□□□□ -1.27
CPSF7-213ENST00000494016 TOB2Q14106 344 aaPredicted RBP7.13□□□□□ -1.27
CPSF7-213ENST00000494016 XKR5Q6UX68 686 aa7.13□□□□□ -1.27
CPSF7-213ENST00000494016 LDHAL6AQ6ZMR3 332 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms