RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 C2CD5Q86YS7 1000 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 TEX11Q8IYF3 940 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 DEPTORQ8TB45 409 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 TEX12Q9BXU0 123 aa8.6□□□□□ -1.03
BRCA1-221ENST00000493795 LMNAP02545 664 aaKnown RBP8.59□□□□□ -1.03
BRCA1-221ENST00000493795 PUM3Q15397 648 aaKnown RBP8.59□□□□□ -1.03
BRCA1-221ENST00000493795 RNF207Q6ZRF8 634 aa8.59□□□□□ -1.03
BRCA1-221ENST00000493795 SRRM1Q8IYB3 904 aaKnown RBP8.59□□□□□ -1.03
BRCA1-221ENST00000493795 TRIML1Q8N9V2 468 aa8.59□□□□□ -1.03
BRCA1-221ENST00000493795 NR1H4Q96RI1 486 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-221ENST00000493795 TTC1Q99614 292 aa8.59□□□□□ -1.03
BRCA1-221ENST00000493795 SFMBT1Q9UHJ3 866 aa8.59□□□□□ -1.03
BRCA1-221ENST00000493795 A6NJR5 290 aa8.59□□□□□ -1.03
BRCA1-221ENST00000493795 RIMBP2O15034 1052 aa8.59□□□□□ -1.03
BRCA1-221ENST00000493795 ABCB4P21439 1286 aa8.59□□□□□ -1.03
BRCA1-221ENST00000493795 KSR2Q6VAB6 950 aa8.59□□□□□ -1.03
BRCA1-221ENST00000493795 EP400NLQ6ZTU2 488 aa8.59□□□□□ -1.03
BRCA1-221ENST00000493795 MAP7D3Q8IWC1 876 aa8.59□□□□□ -1.03
BRCA1-221ENST00000493795 TRIML2Q8N7C3 387 aa8.59□□□□□ -1.03
BRCA1-221ENST00000493795 USP6NLQ92738 828 aa8.59□□□□□ -1.03
BRCA1-221ENST00000493795 FAM207AQ9NSI2 230 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-221ENST00000493795 NFE2L3Q9Y4A8 694 aa8.59□□□□□ -1.03
BRCA1-221ENST00000493795 MBD4O95243 580 aa8.59□□□□□ -1.03
BRCA1-221ENST00000493795 CCDC184Q52MB2 194 aa8.59□□□□□ -1.03
BRCA1-221ENST00000493795 GLE1Q53GS7 698 aaKnown RBP8.59□□□□□ -1.03
BRCA1-221ENST00000493795 RBM17Q96I25 401 aaKnown RBP8.59□□□□□ -1.03
BRCA1-221ENST00000493795 MEIS3Q99687 375 aa8.59□□□□□ -1.03
BRCA1-221ENST00000493795 INTS9Q9NV88 658 aaKnown RBP8.59□□□□□ -1.03
BRCA1-221ENST00000493795 HESX1Q9UBX0 185 aa8.59□□□□□ -1.03
BRCA1-221ENST00000493795 SYNJ2O15056 1496 aa8.59□□□□□ -1.03
BRCA1-221ENST00000493795 KDM3AQ9Y4C1 1321 aa8.59□□□□□ -1.03
BRCA1-221ENST00000493795 CREB3O43889 395 aa8.59□□□□□ -1.03
BRCA1-221ENST00000493795 KRT8P05787 483 aa8.59□□□□□ -1.03
BRCA1-221ENST00000493795 RPS6KB1P23443 525 aa8.59□□□□□ -1.03
BRCA1-221ENST00000493795 ART3Q13508 389 aa8.59□□□□□ -1.03
BRCA1-221ENST00000493795 TPTE2Q6XPS3 522 aa8.59□□□□□ -1.03
BRCA1-221ENST00000493795 HOOK2Q96ED9 719 aa8.59□□□□□ -1.03
BRCA1-221ENST00000493795 LZTS2Q9BRK4 669 aa8.59□□□□□ -1.03
BRCA1-221ENST00000493795 NT5C3AQ9H0P0 336 aa8.59□□□□□ -1.03
BRCA1-221ENST00000493795 TYW5A2RUC4 315 aaKnown RBP8.59□□□□□ -1.04
BRCA1-221ENST00000493795 TMEM247A6NEH6 219 aa8.59□□□□□ -1.04
BRCA1-221ENST00000493795 H7C0C1 242 aa8.59□□□□□ -1.04
BRCA1-221ENST00000493795 MCF2P10911 925 aa8.59□□□□□ -1.04
BRCA1-221ENST00000493795 ATP5OP48047 213 aa8.59□□□□□ -1.04
BRCA1-221ENST00000493795 BLVRAP53004 296 aa8.59□□□□□ -1.04
BRCA1-221ENST00000493795 GPIHBP1Q8IV16 184 aa8.59□□□□□ -1.04
BRCA1-221ENST00000493795 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.59□□□□□ -1.04
BRCA1-221ENST00000493795 RPS6KC1Q96S38 1066 aa8.59□□□□□ -1.04
BRCA1-221ENST00000493795 C1orf112Q9NSG2 853 aa8.59□□□□□ -1.04
BRCA1-221ENST00000493795 ERICH3Q5RHP9 1530 aa8.58□□□□□ -1.04
BRCA1-221ENST00000493795 H3BRJ5 948 aa8.58□□□□□ -1.04
BRCA1-221ENST00000493795 WBP4O75554 376 aaKnown RBP8.58□□□□□ -1.04
BRCA1-221ENST00000493795 XRCC5P13010 732 aaKnown RBP8.58□□□□□ -1.04
BRCA1-221ENST00000493795 GNL1P36915 607 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-221ENST00000493795 COPS6Q7L5N1 327 aa8.58□□□□□ -1.04
BRCA1-221ENST00000493795 TRIM59Q8IWR1 403 aa8.58□□□□□ -1.04
BRCA1-221ENST00000493795 PALMDQ9NP74 551 aa8.58□□□□□ -1.04
BRCA1-221ENST00000493795 TCP1P17987 556 aaKnown RBP8.58□□□□□ -1.04
BRCA1-221ENST00000493795 EFCAB13Q8IY85 973 aa8.58□□□□□ -1.04
BRCA1-221ENST00000493795 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-221ENST00000493795 UPF3AQ9H1J1 476 aaKnown RBP8.58□□□□□ -1.04
BRCA1-221ENST00000493795 NLRC4Q9NPP4 1024 aa8.58□□□□□ -1.04
BRCA1-221ENST00000493795 ZNF148Q9UQR1 794 aa8.58□□□□□ -1.04
BRCA1-221ENST00000493795 POC1B-GALNT4F8VUJ3 575 aa8.58□□□□□ -1.04
BRCA1-221ENST00000493795 CCDC159P0C7I6 412 aa8.58□□□□□ -1.04
BRCA1-221ENST00000493795 ZBTB8OSQ8IWT0 167 aa8.58□□□□□ -1.04
BRCA1-221ENST00000493795 CDV3Q9UKY7 258 aaKnown RBP8.58□□□□□ -1.04
BRCA1-221ENST00000493795 NSFL1CQ9UNZ2 370 aaKnown RBP8.58□□□□□ -1.04
BRCA1-221ENST00000493795 MAST3O60307 1309 aa8.58□□□□□ -1.04
BRCA1-221ENST00000493795 ZNF202O95125 648 aa8.58□□□□□ -1.04
BRCA1-221ENST00000493795 CCDC92Q53HC0 331 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-221ENST00000493795 RFX6Q8HWS3 928 aa8.58□□□□□ -1.04
BRCA1-221ENST00000493795 CERS3Q8IU89 383 aa8.58□□□□□ -1.04
BRCA1-221ENST00000493795 FAM193BQ96PV7 902 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-221ENST00000493795 MMS19Q96T76 1030 aa8.58□□□□□ -1.04
BRCA1-221ENST00000493795 USP26Q9BXU7 913 aa8.58□□□□□ -1.04
BRCA1-221ENST00000493795 PCDHB13Q9Y5F0 798 aa8.58□□□□□ -1.04
BRCA1-221ENST00000493795 V9GY48 417 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-221ENST00000493795 CASKIN1Q8WXD9 1431 aa8.58□□□□□ -1.04
BRCA1-221ENST00000493795 EFCAB8A8MWE9 144 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 F8W8V4 182 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 H0YCG3 227 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 GFAPP14136 432 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 HLA-DPA1P20036 260 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 TFCP2Q12800 502 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 NLRX1Q86UT6 975 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 UBN1Q9NPG3 1134 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 A0A1B0GW55 424 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 FAM95CA0A1B0GW59 222 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 MAFGO15525 162 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 DUX4L2P0CJ85 424 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 DUX4L3P0CJ86 424 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 DUX4L4P0CJ87 422 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 DUX4L5P0CJ88 424 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 DUX4L6P0CJ89 424 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 DUX4L7P0CJ90 424 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 CCT5P48643 541 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 MYSM1Q5VVJ2 828 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 KSR1Q8IVT5 923 aa8.57□□□□□ -1.04
BRCA1-221ENST00000493795 UHMK1Q8TAS1 419 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms