RNA–Protein interactions for RNA: ENST00000493610.2

PDCD11-206, Transcript of programmed cell death 11, humanhuman

TSL 5

Gene PDCD11, Length 732 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-206ENST00000493610 ZKSCAN3Q9BRR0 538 aa16.13■□□□□ 0.17
PDCD11-206ENST00000493610 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.13■□□□□ 0.17
PDCD11-206ENST00000493610 MROH8Q9H579 483 aa16.13■□□□□ 0.17
PDCD11-206ENST00000493610 TOMM22Q9NS69 142 aa16.13■□□□□ 0.17
PDCD11-206ENST00000493610 ZSWIM5Q9P217 1185 aa16.13■□□□□ 0.17
PDCD11-206ENST00000493610 PLXNA1Q9UIW2 1896 aa16.13■□□□□ 0.17
PDCD11-206ENST00000493610 TMEM232C9JQI7 657 aa16.12■□□□□ 0.17
PDCD11-206ENST00000493610 STRNO43815 780 aa16.12■□□□□ 0.17
PDCD11-206ENST00000493610 KDM4AO75164 1064 aa16.12■□□□□ 0.17
PDCD11-206ENST00000493610 SGPL1O95470 568 aa16.12■□□□□ 0.17
PDCD11-206ENST00000493610 SNHG28P0DPA3 235 aa16.12■□□□□ 0.17
PDCD11-206ENST00000493610 TOP1P11387 765 aaKnown RBP16.12■□□□□ 0.17
PDCD11-206ENST00000493610 CCND3P30281 292 aaPredicted RBP16.12■□□□□ 0.17
PDCD11-206ENST00000493610 BMP2KLQ5H9B9 411 aa16.12■□□□□ 0.17
PDCD11-206ENST00000493610 WDR78Q5VTH9 848 aa16.12■□□□□ 0.17
PDCD11-206ENST00000493610 CYB5R4Q7L1T6 521 aa16.12■□□□□ 0.17
PDCD11-206ENST00000493610 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.12■□□□□ 0.17
PDCD11-206ENST00000493610 NCAPG2Q86XI2 1143 aa16.12■□□□□ 0.17
PDCD11-206ENST00000493610 ABRAQ8N0Z2 381 aa16.12■□□□□ 0.17
PDCD11-206ENST00000493610 ANKS1AQ92625 1134 aa16.12■□□□□ 0.17
PDCD11-206ENST00000493610 MAP4K1Q92918 833 aa16.12■□□□□ 0.17
PDCD11-206ENST00000493610 KIFC2Q96AC6 838 aa16.12■□□□□ 0.17
PDCD11-206ENST00000493610 DEFB118Q96PH6 123 aa16.12■□□□□ 0.17
PDCD11-206ENST00000493610 LSG1Q9H089 658 aaKnown RBP16.12■□□□□ 0.17
PDCD11-206ENST00000493610 RAVER2Q9HCJ3 691 aaKnown RBP16.12■□□□□ 0.17
PDCD11-206ENST00000493610 RPTORQ8N122 1335 aa16.12■□□□□ 0.17
PDCD11-206ENST00000493610 SLC25A27O95847 323 aa16.11■□□□□ 0.17
PDCD11-206ENST00000493610 PDHBP11177 359 aa16.11■□□□□ 0.17
PDCD11-206ENST00000493610 PRKAR2AP13861 404 aaKnown RBP16.11■□□□□ 0.17
PDCD11-206ENST00000493610 ZKSCAN1P17029 563 aaPredicted RBP16.11■□□□□ 0.17
PDCD11-206ENST00000493610 TAL1P17542 331 aaPredicted RBP16.11■□□□□ 0.17
PDCD11-206ENST00000493610 SNAP25P60880 206 aa16.11■□□□□ 0.17
PDCD11-206ENST00000493610 BTNL9Q6UXG8 535 aa16.11■□□□□ 0.17
PDCD11-206ENST00000493610 CCAR1Q8IX12 1150 aaKnown RBP16.11■□□□□ 0.17
PDCD11-206ENST00000493610 FGD4Q96M96 766 aa16.11■□□□□ 0.17
PDCD11-206ENST00000493610 TTC14Q96N46 770 aa16.11■□□□□ 0.17
PDCD11-206ENST00000493610 RNF41Q9H4P4 317 aaPredicted RBP16.11■□□□□ 0.17
PDCD11-206ENST00000493610 LCTP09848 1927 aa16.11■□□□□ 0.17
PDCD11-206ENST00000493610 PDE4DIPQ5VU43 2346 aa16.11■□□□□ 0.17
PDCD11-206ENST00000493610 ALPK3Q96L96 1907 aa16.1■□□□□ 0.17
PDCD11-206ENST00000493610 DNAJC25-GNG10A0A024R161 153 aa16.1■□□□□ 0.17
PDCD11-206ENST00000493610 CYP2C19P33261 490 aa16.1■□□□□ 0.17
PDCD11-206ENST00000493610 SLC1A4P43007 532 aa16.1■□□□□ 0.17
PDCD11-206ENST00000493610 SEC23AQ15436 765 aa16.1■□□□□ 0.17
PDCD11-206ENST00000493610 IMMTQ16891 758 aaKnown RBP16.1■□□□□ 0.17
PDCD11-206ENST00000493610 ZNF792Q3KQV3 632 aa16.1■□□□□ 0.17
PDCD11-206ENST00000493610 LHX8Q68G74 356 aa16.1■□□□□ 0.17
PDCD11-206ENST00000493610 SNRNP48Q6IEG0 339 aaKnown RBP16.1■□□□□ 0.17
PDCD11-206ENST00000493610 TRMT44Q8IYL2 757 aaKnown RBP16.1■□□□□ 0.17
PDCD11-206ENST00000493610 ENAHQ8N8S7 591 aaPredicted RBP16.1■□□□□ 0.17
PDCD11-206ENST00000493610 DCAF4Q8WV16 495 aa16.1■□□□□ 0.17
PDCD11-206ENST00000493610 RUFY2Q8WXA3 655 aa16.1■□□□□ 0.17
PDCD11-206ENST00000493610 ESR2Q92731 530 aa16.1■□□□□ 0.17
PDCD11-206ENST00000493610 ESYT1Q9BSJ8 1104 aa16.1■□□□□ 0.17
PDCD11-206ENST00000493610 TEX13BQ9BXU2 312 aa16.1■□□□□ 0.17
PDCD11-206ENST00000493610 CTNNA3Q9UI47 895 aa16.1■□□□□ 0.17
PDCD11-206ENST00000493610 PRR12Q9ULL5 1215 aa16.1■□□□□ 0.17
PDCD11-206ENST00000493610 IVNS1ABPQ9Y6Y0 642 aa16.1■□□□□ 0.17
PDCD11-206ENST00000493610 PGK2P07205 417 aa16.09■□□□□ 0.17
PDCD11-206ENST00000493610 CYBAP13498 195 aa16.09■□□□□ 0.17
PDCD11-206ENST00000493610 STAT2P52630 851 aa16.09■□□□□ 0.17
PDCD11-206ENST00000493610 PPP4R3BQ5MIZ7 849 aa16.09■□□□□ 0.17
PDCD11-206ENST00000493610 OLFML2BQ68BL8 750 aa16.09■□□□□ 0.17
PDCD11-206ENST00000493610 FAM160B2Q86V87 743 aa16.09■□□□□ 0.17
PDCD11-206ENST00000493610 DGKHQ86XP1 1220 aa16.09■□□□□ 0.17
PDCD11-206ENST00000493610 CPXCR1Q8N123 301 aa16.09■□□□□ 0.17
PDCD11-206ENST00000493610 MAML3Q96JK9 1138 aa16.09■□□□□ 0.17
PDCD11-206ENST00000493610 HMX1Q9NP08 348 aaPredicted RBP16.09■□□□□ 0.17
PDCD11-206ENST00000493610 MTMR7Q9Y216 660 aa16.09■□□□□ 0.17
PDCD11-206ENST00000493610 FRMPD2Q68DX3 1309 aaPredicted RBP16.09■□□□□ 0.17
PDCD11-206ENST00000493610 FCER1AP12319 257 aa16.08■□□□□ 0.16
PDCD11-206ENST00000493610 SLC16A2P36021 539 aa16.08■□□□□ 0.16
PDCD11-206ENST00000493610 OAZ1P54368 228 aa16.08■□□□□ 0.16
PDCD11-206ENST00000493610 ZNF543Q08ER8 600 aa16.08■□□□□ 0.16
PDCD11-206ENST00000493610 DIS3LQ8TF46 1054 aaKnown RBP16.08■□□□□ 0.16
PDCD11-206ENST00000493610 CCDC136Q96JN2 1154 aa16.08■□□□□ 0.16
PDCD11-206ENST00000493610 AGBL1Q96MI9 1066 aa16.08■□□□□ 0.16
PDCD11-206ENST00000493610 ZSCAN10Q96SZ4 725 aaPredicted RBP16.08■□□□□ 0.16
PDCD11-206ENST00000493610 MMP19Q99542 508 aa16.08■□□□□ 0.16
PDCD11-206ENST00000493610 SENP2Q9HC62 589 aa16.08■□□□□ 0.16
PDCD11-206ENST00000493610 OGDHLQ9ULD0 1010 aa16.08■□□□□ 0.16
PDCD11-206ENST00000493610 RBM8AQ9Y5S9 174 aaKnown RBP16.08■□□□□ 0.16
PDCD11-206ENST00000493610 ZBED4O75132 1171 aa16.07■□□□□ 0.16
PDCD11-206ENST00000493610 NT5C2P49902 561 aa16.07■□□□□ 0.16
PDCD11-206ENST00000493610 ANTXR2P58335 489 aa16.07■□□□□ 0.16
PDCD11-206ENST00000493610 PRAMEF19Q5SWL8 479 aa16.07■□□□□ 0.16
PDCD11-206ENST00000493610 DPP9Q86TI2 863 aa16.07■□□□□ 0.16
PDCD11-206ENST00000493610 CHURC1Q8WUH1 139 aa16.07■□□□□ 0.16
PDCD11-206ENST00000493610 RANBP17Q9H2T7 1088 aaKnown RBP16.07■□□□□ 0.16
PDCD11-206ENST00000493610 CPVLQ9H3G5 476 aa16.07■□□□□ 0.16
PDCD11-206ENST00000493610 CWC22Q9HCG8 908 aaKnown RBP16.07■□□□□ 0.16
PDCD11-206ENST00000493610 GPCPD1Q9NPB8 672 aa16.07■□□□□ 0.16
PDCD11-206ENST00000493610 U3KPZ7 1027 aaPredicted RBP16.07■□□□□ 0.16
PDCD11-206ENST00000493610 TNKSO95271 1327 aa16.07■□□□□ 0.16
PDCD11-206ENST00000493610 ASTN1O14525 1302 aa16.06■□□□□ 0.16
PDCD11-206ENST00000493610 E7EWF7 191 aa16.06■□□□□ 0.16
PDCD11-206ENST00000493610 NECTIN1Q15223 517 aa16.06■□□□□ 0.16
PDCD11-206ENST00000493610 SLC35G1Q2M3R5 365 aa16.06■□□□□ 0.16
PDCD11-206ENST00000493610 MUM1L1Q5H9M0 696 aa16.06■□□□□ 0.16
PDCD11-206ENST00000493610 MB21D2Q8IYB1 491 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms