RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 ZSCAN5CA6NGD5 496 aaPredicted RBP13.06□□□□□ -0.32
HDAC4-210ENST00000493582 EYA2O00167 538 aa13.06□□□□□ -0.32
HDAC4-210ENST00000493582 DNM1LO00429 736 aa13.06□□□□□ -0.32
HDAC4-210ENST00000493582 ATP2C2O75185 946 aa13.06□□□□□ -0.32
HDAC4-210ENST00000493582 SPAG1Q07617 926 aa13.06□□□□□ -0.32
HDAC4-210ENST00000493582 CFAP58Q5T655 872 aa13.06□□□□□ -0.32
HDAC4-210ENST00000493582 HAUS3Q68CZ6 603 aa13.06□□□□□ -0.32
HDAC4-210ENST00000493582 NFRKBQ6P4R8 1299 aa13.06□□□□□ -0.32
HDAC4-210ENST00000493582 IRF2BP1Q8IU81 584 aa13.06□□□□□ -0.32
HDAC4-210ENST00000493582 EGFL6Q8IUX8 553 aa13.06□□□□□ -0.32
HDAC4-210ENST00000493582 FUKQ8N0W3 1084 aa13.06□□□□□ -0.32
HDAC4-210ENST00000493582 SGSM3Q96HU1 749 aa13.06□□□□□ -0.32
HDAC4-210ENST00000493582 GPR108Q9NPR9 543 aa13.06□□□□□ -0.32
HDAC4-210ENST00000493582 HAUS2Q9NVX0 235 aa13.06□□□□□ -0.32
HDAC4-210ENST00000493582 AATFQ9NY61 560 aaKnown RBP eCLIP13.06□□□□□ -0.32
HDAC4-210ENST00000493582 RWDD2AQ9UIY3 292 aa13.06□□□□□ -0.32
HDAC4-210ENST00000493582 NFU1Q9UMS0 254 aa13.06□□□□□ -0.32
HDAC4-210ENST00000493582 CEP131Q9UPN4 1083 aa13.06□□□□□ -0.32
HDAC4-210ENST00000493582 CAPN6Q9Y6Q1 641 aa13.06□□□□□ -0.32
HDAC4-210ENST00000493582 WNT7AO00755 349 aa13.06□□□□□ -0.32
HDAC4-210ENST00000493582 IFIT3O14879 490 aaKnown RBP13.06□□□□□ -0.32
HDAC4-210ENST00000493582 PPP1R12BO60237 982 aaPredicted RBP13.06□□□□□ -0.32
HDAC4-210ENST00000493582 IPO7O95373 1038 aaKnown RBP13.06□□□□□ -0.32
HDAC4-210ENST00000493582 ZFYP08048 801 aaPredicted RBP13.06□□□□□ -0.32
HDAC4-210ENST00000493582 PARP1P09874 1014 aaKnown RBP13.06□□□□□ -0.32
HDAC4-210ENST00000493582 HPDP32754 393 aaPredicted RBP13.06□□□□□ -0.32
HDAC4-210ENST00000493582 KLK7P49862 253 aa13.06□□□□□ -0.32
HDAC4-210ENST00000493582 MRPL12P52815 198 aaKnown RBP13.06□□□□□ -0.32
HDAC4-210ENST00000493582 KIF5AQ12840 1032 aa13.06□□□□□ -0.32
HDAC4-210ENST00000493582 EARS2Q5JPH6 523 aaKnown RBP13.06□□□□□ -0.32
HDAC4-210ENST00000493582 IQCKQ8N0W5 287 aa13.06□□□□□ -0.32
HDAC4-210ENST00000493582 IFT81Q8WYA0 676 aa13.06□□□□□ -0.32
HDAC4-210ENST00000493582 ZNF496Q96IT1 587 aaPredicted RBP13.06□□□□□ -0.32
HDAC4-210ENST00000493582 ZKSCAN3Q9BRR0 538 aa13.06□□□□□ -0.32
HDAC4-210ENST00000493582 LRWD1Q9UFC0 647 aa13.06□□□□□ -0.32
HDAC4-210ENST00000493582 CAPN11Q9UMQ6 739 aa13.06□□□□□ -0.32
HDAC4-210ENST00000493582 GDAQ9Y2T3 454 aa13.06□□□□□ -0.32
HDAC4-210ENST00000493582 MDH1P40925 334 aaKnown RBP13.05□□□□□ -0.32
HDAC4-210ENST00000493582 CARSP49589 748 aaKnown RBP13.05□□□□□ -0.32
HDAC4-210ENST00000493582 GUCY2FP51841 1108 aa13.05□□□□□ -0.32
HDAC4-210ENST00000493582 CCDC121Q6ZUS5 278 aa13.05□□□□□ -0.32
HDAC4-210ENST00000493582 GPIHBP1Q8IV16 184 aa13.05□□□□□ -0.32
HDAC4-210ENST00000493582 PAGR1Q9BTK6 254 aa13.05□□□□□ -0.32
HDAC4-210ENST00000493582 MLXIPQ9HAP2 919 aa13.05□□□□□ -0.32
HDAC4-210ENST00000493582 ZSWIM5Q9P217 1185 aa13.05□□□□□ -0.32
HDAC4-210ENST00000493582 TPX2Q9ULW0 747 aaKnown RBP13.05□□□□□ -0.32
HDAC4-210ENST00000493582 XDHP47989 1333 aa13.05□□□□□ -0.32
HDAC4-210ENST00000493582 BACH1O14867 736 aa13.05□□□□□ -0.32
HDAC4-210ENST00000493582 FAM107AO95990 144 aa13.05□□□□□ -0.32
HDAC4-210ENST00000493582 IFNAR1P17181 557 aa13.05□□□□□ -0.32
HDAC4-210ENST00000493582 CRYMQ14894 314 aa13.05□□□□□ -0.32
HDAC4-210ENST00000493582 C6orf89Q6UWU4 347 aa13.05□□□□□ -0.32
HDAC4-210ENST00000493582 LRP10Q7Z4F1 713 aa13.05□□□□□ -0.32
HDAC4-210ENST00000493582 OSBPL7Q9BZF2 842 aa13.05□□□□□ -0.32
HDAC4-210ENST00000493582 TRIM6Q9C030 488 aaPredicted RBP13.05□□□□□ -0.32
HDAC4-210ENST00000493582 OPLAHO14841 1288 aa13.04□□□□□ -0.32
HDAC4-210ENST00000493582 CYLC1P35663 651 aaPredicted RBP13.04□□□□□ -0.32
HDAC4-210ENST00000493582 NAA25Q14CX7 972 aa13.04□□□□□ -0.32
HDAC4-210ENST00000493582 CCDC96Q2M329 555 aa13.04□□□□□ -0.32
HDAC4-210ENST00000493582 TICAM2Q86XR7 235 aa13.04□□□□□ -0.32
HDAC4-210ENST00000493582 TRIM22Q8IYM9 498 aa13.04□□□□□ -0.32
HDAC4-210ENST00000493582 WASF1Q92558 559 aa13.04□□□□□ -0.32
HDAC4-210ENST00000493582 TMEM87BQ96K49 555 aa13.04□□□□□ -0.32
HDAC4-210ENST00000493582 MTRQ99707 1265 aa13.04□□□□□ -0.32
HDAC4-210ENST00000493582 CEP126Q9P2H0 1117 aa13.04□□□□□ -0.32
HDAC4-210ENST00000493582 GOLGA6L7A0A1B0GV03 622 aa13.04□□□□□ -0.32
HDAC4-210ENST00000493582 TRIM75PA6NK02 468 aa13.04□□□□□ -0.32
HDAC4-210ENST00000493582 ZNF263O14978 683 aa13.04□□□□□ -0.32
HDAC4-210ENST00000493582 NCK2O43639 380 aa13.04□□□□□ -0.32
HDAC4-210ENST00000493582 MOCS3O95396 460 aa13.04□□□□□ -0.32
HDAC4-210ENST00000493582 GLI1P08151 1106 aa13.04□□□□□ -0.32
HDAC4-210ENST00000493582 PLEKP08567 350 aaPredicted RBP13.04□□□□□ -0.32
HDAC4-210ENST00000493582 EZRP15311 586 aaKnown RBP13.04□□□□□ -0.32
HDAC4-210ENST00000493582 PRCPP42785 496 aa13.04□□□□□ -0.32
HDAC4-210ENST00000493582 CCDC181Q5TID7 509 aa13.04□□□□□ -0.32
HDAC4-210ENST00000493582 C8orf74Q6P047 294 aa13.04□□□□□ -0.32
HDAC4-210ENST00000493582 TBC1D22AQ8WUA7 517 aa13.04□□□□□ -0.32
HDAC4-210ENST00000493582 CAVIN3Q969G5 261 aa13.04□□□□□ -0.32
HDAC4-210ENST00000493582 CYFIP2Q96F07 1278 aa13.04□□□□□ -0.32
HDAC4-210ENST00000493582 OSBPL9Q96SU4 736 aa13.04□□□□□ -0.32
HDAC4-210ENST00000493582 hCG_1642624A0A1W2PR95 340 aa13.04□□□□□ -0.32
HDAC4-210ENST00000493582 TRIM21P19474 475 aaKnown RBP13.04□□□□□ -0.32
HDAC4-210ENST00000493582 VAV2P52735 878 aa13.04□□□□□ -0.32
HDAC4-210ENST00000493582 PMS1P54277 932 aaKnown RBP13.04□□□□□ -0.32
HDAC4-210ENST00000493582 PLCB4Q15147 1175 aa13.04□□□□□ -0.32
HDAC4-210ENST00000493582 ZNF174Q15697 407 aa13.04□□□□□ -0.32
HDAC4-210ENST00000493582 FNBP4Q8N3X1 1017 aaPredicted RBP13.04□□□□□ -0.32
HDAC4-210ENST00000493582 RNF217Q8TC41 542 aa13.04□□□□□ -0.32
HDAC4-210ENST00000493582 CCDC85AQ96PX6 553 aaPredicted RBP13.04□□□□□ -0.32
HDAC4-210ENST00000493582 RBM12Q9NTZ6 932 aaKnown RBP13.04□□□□□ -0.32
HDAC4-210ENST00000493582 RTN2O75298 545 aa13.03□□□□□ -0.32
HDAC4-210ENST00000493582 TRADDQ15628 312 aa13.03□□□□□ -0.32
HDAC4-210ENST00000493582 SGMS1Q86VZ5 419 aa13.03□□□□□ -0.32
HDAC4-210ENST00000493582 PIK3R5Q8WYR1 880 aa13.03□□□□□ -0.32
HDAC4-210ENST00000493582 MS4A14Q96JA4 679 aa13.03□□□□□ -0.32
HDAC4-210ENST00000493582 PURBQ96QR8 312 aaKnown RBP13.03□□□□□ -0.32
HDAC4-210ENST00000493582 B4DLN1 442 aa13.03□□□□□ -0.32
HDAC4-210ENST00000493582 ZPR1O75312 459 aa13.03□□□□□ -0.32
HDAC4-210ENST00000493582 CCNHP51946 323 aaPredicted RBP13.03□□□□□ -0.32
HDAC4-210ENST00000493582 CTDSPL2Q05D32 466 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms