RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 CNPY2Q9Y2B0 182 aa11.64□□□□□ -0.55
PRPF3-206ENST00000493553 NID2Q14112 1375 aa11.64□□□□□ -0.55
PRPF3-206ENST00000493553 SNAP23O00161 211 aa11.63□□□□□ -0.55
PRPF3-206ENST00000493553 JAK2O60674 1132 aa11.63□□□□□ -0.55
PRPF3-206ENST00000493553 FGRP09769 529 aa11.63□□□□□ -0.55
PRPF3-206ENST00000493553 NPR1P16066 1061 aa11.63□□□□□ -0.55
PRPF3-206ENST00000493553 NASPP49321 788 aaPredicted RBP11.63□□□□□ -0.55
PRPF3-206ENST00000493553 CCT2P78371 535 aaKnown RBP11.63□□□□□ -0.55
PRPF3-206ENST00000493553 CENPCQ03188 943 aa11.63□□□□□ -0.55
PRPF3-206ENST00000493553 PDE4BQ07343 736 aa11.63□□□□□ -0.55
PRPF3-206ENST00000493553 WTAPQ15007 396 aa11.63□□□□□ -0.55
PRPF3-206ENST00000493553 UVSSAQ2YD98 709 aa11.63□□□□□ -0.55
PRPF3-206ENST00000493553 APOA5Q6Q788 366 aa11.63□□□□□ -0.55
PRPF3-206ENST00000493553 SP8Q8IXZ3 490 aa11.63□□□□□ -0.55
PRPF3-206ENST00000493553 IGDCC4Q8TDY8 1250 aa11.63□□□□□ -0.55
PRPF3-206ENST00000493553 DDX11Q96FC9 970 aa11.63□□□□□ -0.55
PRPF3-206ENST00000493553 TSPY26PQ9H489 355 aa11.63□□□□□ -0.55
PRPF3-206ENST00000493553 EPB41L4AQ9HCS5 686 aaPredicted RBP11.63□□□□□ -0.55
PRPF3-206ENST00000493553 GOLGA8AA7E2F4 631 aa11.62□□□□□ -0.55
PRPF3-206ENST00000493553 B4E1Z4 1266 aa11.62□□□□□ -0.55
PRPF3-206ENST00000493553 PIK3CDO00329 1044 aa11.62□□□□□ -0.55
PRPF3-206ENST00000493553 POLRMTO00411 1230 aaKnown RBP11.62□□□□□ -0.55
PRPF3-206ENST00000493553 CTAGE5O15320 804 aa11.62□□□□□ -0.55
PRPF3-206ENST00000493553 XBP1P17861 261 aa11.62□□□□□ -0.55
PRPF3-206ENST00000493553 LORP23490 312 aaPredicted RBP11.62□□□□□ -0.55
PRPF3-206ENST00000493553 IARSP41252 1262 aaKnown RBP11.62□□□□□ -0.55
PRPF3-206ENST00000493553 MECOMQ03112 1051 aa11.62□□□□□ -0.55
PRPF3-206ENST00000493553 CCDC173Q0VFZ6 552 aa11.62□□□□□ -0.55
PRPF3-206ENST00000493553 SAFBQ15424 915 aaKnown RBP eCLIP11.62□□□□□ -0.55
PRPF3-206ENST00000493553 GPR161Q8N6U8 529 aaKnown RBP11.62□□□□□ -0.55
PRPF3-206ENST00000493553 JMYQ8N9B5 988 aa11.62□□□□□ -0.55
PRPF3-206ENST00000493553 FBXO18Q8NFZ0 1043 aa11.62□□□□□ -0.55
PRPF3-206ENST00000493553 TOMM22Q9NS69 142 aa11.62□□□□□ -0.55
PRPF3-206ENST00000493553 TMEM63CQ9P1W3 806 aa11.62□□□□□ -0.55
PRPF3-206ENST00000493553 RCOR1Q9UKL0 485 aa11.62□□□□□ -0.55
PRPF3-206ENST00000493553 BRPF3Q9ULD4 1205 aa11.62□□□□□ -0.55
PRPF3-206ENST00000493553 IRS2Q9Y4H2 1338 aa11.61□□□□□ -0.55
PRPF3-206ENST00000493553 CTDNEP1O95476 244 aa11.61□□□□□ -0.55
PRPF3-206ENST00000493553 APBA3O96018 575 aa11.61□□□□□ -0.55
PRPF3-206ENST00000493553 IL1R1P14778 569 aa11.61□□□□□ -0.55
PRPF3-206ENST00000493553 IFNAR1P17181 557 aa11.61□□□□□ -0.55
PRPF3-206ENST00000493553 SSRP1Q08945 709 aaKnown RBP11.61□□□□□ -0.55
PRPF3-206ENST00000493553 POU4F2Q12837 409 aa11.61□□□□□ -0.55
PRPF3-206ENST00000493553 SV2AQ7L0J3 742 aa11.61□□□□□ -0.55
PRPF3-206ENST00000493553 FERMT3Q86UX7 667 aa11.61□□□□□ -0.55
PRPF3-206ENST00000493553 FAM177A1Q8N128 213 aaPredicted RBP11.61□□□□□ -0.55
PRPF3-206ENST00000493553 MIGA1Q8NAN2 632 aa11.61□□□□□ -0.55
PRPF3-206ENST00000493553 ZSCAN1Q8NBB4 408 aa11.61□□□□□ -0.55
PRPF3-206ENST00000493553 KCNG4Q8TDN1 519 aa11.61□□□□□ -0.55
PRPF3-206ENST00000493553 LEO1Q8WVC0 666 aaPredicted RBP11.61□□□□□ -0.55
PRPF3-206ENST00000493553 FHDC1Q9C0D6 1143 aaPredicted RBP11.61□□□□□ -0.55
PRPF3-206ENST00000493553 LY9Q9HBG7 655 aa11.61□□□□□ -0.55
PRPF3-206ENST00000493553 RBM28Q9NW13 759 aaKnown RBP11.61□□□□□ -0.55
PRPF3-206ENST00000493553 ZSWIM5Q9P217 1185 aa11.61□□□□□ -0.55
PRPF3-206ENST00000493553 IQSEC3Q9UPP2 1182 aaPredicted RBP11.61□□□□□ -0.55
PRPF3-206ENST00000493553 DYRK1BQ9Y463 629 aa11.61□□□□□ -0.55
PRPF3-206ENST00000493553 PARP3Q9Y6F1 533 aa11.61□□□□□ -0.55
PRPF3-206ENST00000493553 TIAM2Q8IVF5 1701 aa11.6□□□□□ -0.55
PRPF3-206ENST00000493553 UBR3Q6ZT12 1888 aa11.6□□□□□ -0.55
PRPF3-206ENST00000493553 POM121CA8CG34 1229 aa11.6□□□□□ -0.55
PRPF3-206ENST00000493553 LZTS3O60299 673 aaPredicted RBP11.6□□□□□ -0.55
PRPF3-206ENST00000493553 DDAH1O94760 285 aa11.6□□□□□ -0.55
PRPF3-206ENST00000493553 UFL1O94874 794 aa11.6□□□□□ -0.55
PRPF3-206ENST00000493553 YEATS4O95619 227 aa11.6□□□□□ -0.55
PRPF3-206ENST00000493553 AKAP17AQ02040 695 aaKnown RBP11.6□□□□□ -0.55
PRPF3-206ENST00000493553 CHAF1AQ13111 956 aaPredicted RBP11.6□□□□□ -0.55
PRPF3-206ENST00000493553 RTN1Q16799 776 aa11.6□□□□□ -0.55
PRPF3-206ENST00000493553 CYB5R4Q7L1T6 521 aa11.6□□□□□ -0.55
PRPF3-206ENST00000493553 CHST3Q7LGC8 479 aa11.6□□□□□ -0.55
PRPF3-206ENST00000493553 TAS1R3Q7RTX0 852 aa11.6□□□□□ -0.55
PRPF3-206ENST00000493553 CATIPQ7Z7H3 387 aa11.6□□□□□ -0.55
PRPF3-206ENST00000493553 VWA5B2Q8N398 1253 aa11.6□□□□□ -0.55
PRPF3-206ENST00000493553 EYA3Q99504 573 aa11.6□□□□□ -0.55
PRPF3-206ENST00000493553 COA1Q9GZY4 146 aa11.6□□□□□ -0.55
PRPF3-206ENST00000493553 ETNK1Q9HBU6 452 aa11.6□□□□□ -0.55
PRPF3-206ENST00000493553 NCOA5Q9HCD5 579 aaKnown RBP11.6□□□□□ -0.55
PRPF3-206ENST00000493553 RTEL1Q9NZ71 1219 aa11.6□□□□□ -0.55
PRPF3-206ENST00000493553 NSFL1CQ9UNZ2 370 aaKnown RBP11.6□□□□□ -0.55
PRPF3-206ENST00000493553 ATP6V0A2Q9Y487 856 aa11.6□□□□□ -0.55
PRPF3-206ENST00000493553 LAMA4Q16363 1823 aa11.6□□□□□ -0.55
PRPF3-206ENST00000493553 C4AP0C0L4 1744 aa11.6□□□□□ -0.55
PRPF3-206ENST00000493553 NEDD4P46934 1319 aa11.6□□□□□ -0.55
PRPF3-206ENST00000493553 FAM205AQ6ZU69 1335 aa11.6□□□□□ -0.55
PRPF3-206ENST00000493553 MINDY4BA8MYZ0 360 aa11.59□□□□□ -0.55
PRPF3-206ENST00000493553 PRKAB2O43741 272 aa11.59□□□□□ -0.55
PRPF3-206ENST00000493553 GADD45BO75293 160 aaPredicted RBP11.59□□□□□ -0.55
PRPF3-206ENST00000493553 CCDC192P0DO97 292 aa11.59□□□□□ -0.55
PRPF3-206ENST00000493553 GNL2Q13823 731 aaKnown RBP11.59□□□□□ -0.55
PRPF3-206ENST00000493553 COL9A3Q14050 684 aaPredicted RBP11.59□□□□□ -0.55
PRPF3-206ENST00000493553 FOXD4L6Q3SYB3 417 aaPredicted RBP11.59□□□□□ -0.55
PRPF3-206ENST00000493553 HS1BP3Q53T59 392 aa11.59□□□□□ -0.55
PRPF3-206ENST00000493553 FOXD4L3Q6VB84 417 aaPredicted RBP11.59□□□□□ -0.55
PRPF3-206ENST00000493553 CCDC73Q6ZRK6 1079 aa11.59□□□□□ -0.55
PRPF3-206ENST00000493553 TTC6Q86TZ1 520 aa11.59□□□□□ -0.55
PRPF3-206ENST00000493553 AMIGO3Q86WK7 504 aa11.59□□□□□ -0.55
PRPF3-206ENST00000493553 ADAMTS19Q8TE59 1207 aa11.59□□□□□ -0.55
PRPF3-206ENST00000493553 TRIM44Q96DX7 344 aaPredicted RBP11.59□□□□□ -0.55
PRPF3-206ENST00000493553 GMCL1Q96IK5 515 aa11.59□□□□□ -0.55
PRPF3-206ENST00000493553 ZSCAN10Q96SZ4 725 aaPredicted RBP11.59□□□□□ -0.55
PRPF3-206ENST00000493553 MAP3K14Q99558 947 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms