RNA–Protein interactions for RNA: ENST00000493507.5

CCNB3-208, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 340 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-208ENST00000493507 OSBPL1AQ9BXW6 950 aa7.18□□□□□ -1.26
CCNB3-208ENST00000493507 PRDM10Q9NQV6 1147 aa7.18□□□□□ -1.26
CCNB3-208ENST00000493507 COL16A1Q07092 1604 aaPredicted RBP7.18□□□□□ -1.26
CCNB3-208ENST00000493507 NHSL1Q5SYE7 1610 aa7.18□□□□□ -1.26
CCNB3-208ENST00000493507 ADAM23O75077 832 aa7.17□□□□□ -1.26
CCNB3-208ENST00000493507 FAM87AP0C7U9 286 aa7.17□□□□□ -1.26
CCNB3-208ENST00000493507 CLCQ05315 142 aa7.17□□□□□ -1.26
CCNB3-208ENST00000493507 LRRFIP1Q32MZ4 808 aaKnown RBP7.17□□□□□ -1.26
CCNB3-208ENST00000493507 PRAMEF13Q5VWM6 474 aa7.17□□□□□ -1.26
CCNB3-208ENST00000493507 ZDHHC13Q8IUH4 622 aa7.17□□□□□ -1.26
CCNB3-208ENST00000493507 DUSP23Q9BVJ7 150 aa7.17□□□□□ -1.26
CCNB3-208ENST00000493507 CAPN10Q9HC96 672 aa7.17□□□□□ -1.26
CCNB3-208ENST00000493507 ARHGEF28Q8N1W1 1705 aaKnown RBP7.17□□□□□ -1.26
CCNB3-208ENST00000493507 METP08581 1390 aa7.17□□□□□ -1.26
CCNB3-208ENST00000493507 ADGRB1O14514 1584 aa7.16□□□□□ -1.26
CCNB3-208ENST00000493507 FAM170BA6NMN3 283 aa7.16□□□□□ -1.26
CCNB3-208ENST00000493507 SLFN12Q8IYM2 578 aa7.16□□□□□ -1.26
CCNB3-208ENST00000493507 TOP6BLQ8N6T0 577 aa7.16□□□□□ -1.26
CCNB3-208ENST00000493507 FAM13CQ8NE31 585 aa7.16□□□□□ -1.26
CCNB3-208ENST00000493507 SEC16BQ96JE7 1060 aa7.16□□□□□ -1.26
CCNB3-208ENST00000493507 FERD3LQ96RJ6 166 aa7.16□□□□□ -1.26
CCNB3-208ENST00000493507 GMIPQ9P107 970 aa7.16□□□□□ -1.26
CCNB3-208ENST00000493507 EFR3BQ9Y2G0 817 aa7.16□□□□□ -1.26
CCNB3-208ENST00000493507 LEMD3Q9Y2U8 911 aa7.16□□□□□ -1.26
CCNB3-208ENST00000493507 PRAG1Q86YV5 1406 aa7.16□□□□□ -1.26
CCNB3-208ENST00000493507 LAMC1P11047 1609 aa7.16□□□□□ -1.26
CCNB3-208ENST00000493507 USP32Q8NFA0 1604 aa7.16□□□□□ -1.26
CCNB3-208ENST00000493507 FMN2Q9NZ56 1722 aa7.15□□□□□ -1.26
CCNB3-208ENST00000493507 SOX9P48436 509 aa7.15□□□□□ -1.26
CCNB3-208ENST00000493507 TNNI2P48788 182 aa7.15□□□□□ -1.26
CCNB3-208ENST00000493507 ZC3H6P61129 1189 aaKnown RBP7.15□□□□□ -1.26
CCNB3-208ENST00000493507 ZNF746Q6NUN9 644 aaPredicted RBP7.15□□□□□ -1.26
CCNB3-208ENST00000493507 ZNF765Q7L2R6 523 aa7.15□□□□□ -1.26
CCNB3-208ENST00000493507 GINM1Q9NU53 330 aa7.15□□□□□ -1.26
CCNB3-208ENST00000493507 SLC52A1Q9NWF4 448 aa7.15□□□□□ -1.26
CCNB3-208ENST00000493507 KLHL3Q9UH77 587 aa7.15□□□□□ -1.26
CCNB3-208ENST00000493507 ANKRD30BQ9BXX2 1392 aa7.15□□□□□ -1.26
CCNB3-208ENST00000493507 PIK3C2GO75747 1445 aa7.15□□□□□ -1.27
CCNB3-208ENST00000493507 MYOM2P54296 1465 aa7.15□□□□□ -1.27
CCNB3-208ENST00000493507 PHLPP1O60346 1717 aa7.15□□□□□ -1.27
CCNB3-208ENST00000493507 SLC22A31A6NKX4 558 aa7.14□□□□□ -1.27
CCNB3-208ENST00000493507 LEFTY1O75610 366 aa7.14□□□□□ -1.27
CCNB3-208ENST00000493507 GRIK1P39086 918 aa7.14□□□□□ -1.27
CCNB3-208ENST00000493507 SHISA5Q8N114 240 aa7.14□□□□□ -1.27
CCNB3-208ENST00000493507 MPHOSPH9Q99550 1183 aa7.14□□□□□ -1.27
CCNB3-208ENST00000493507 MIPEPQ99797 713 aa7.14□□□□□ -1.27
CCNB3-208ENST00000493507 PIM2Q9P1W9 311 aa7.14□□□□□ -1.27
CCNB3-208ENST00000493507 GTF2IRD1Q9UHL9 959 aa7.14□□□□□ -1.27
CCNB3-208ENST00000493507 ZNRF3Q9ULT6 936 aa7.14□□□□□ -1.27
CCNB3-208ENST00000493507 RNF112Q9ULX5 631 aa7.14□□□□□ -1.27
CCNB3-208ENST00000493507 TBX22Q9Y458 520 aa7.14□□□□□ -1.27
CCNB3-208ENST00000493507 LRP6O75581 1613 aa7.13□□□□□ -1.27
CCNB3-208ENST00000493507 DHX57Q6P158 1386 aaKnown RBP7.13□□□□□ -1.27
CCNB3-208ENST00000493507 JCADQ9P266 1359 aa7.13□□□□□ -1.27
CCNB3-208ENST00000493507 ADGRF5Q8IZF2 1346 aa7.13□□□□□ -1.27
CCNB3-208ENST00000493507 PRR19A6NJB7 356 aa7.13□□□□□ -1.27
CCNB3-208ENST00000493507 UPK3BL1B0FP48 263 aa7.13□□□□□ -1.27
CCNB3-208ENST00000493507 CHURC1-FNTBB4DL54 471 aa7.13□□□□□ -1.27
CCNB3-208ENST00000493507 UPK3BL2E5RIL1 263 aa7.13□□□□□ -1.27
CCNB3-208ENST00000493507 SLITRK5O94991 958 aa7.13□□□□□ -1.27
CCNB3-208ENST00000493507 ITGB7P26010 798 aa7.13□□□□□ -1.27
CCNB3-208ENST00000493507 LETMD1Q6P1Q0 360 aa7.13□□□□□ -1.27
CCNB3-208ENST00000493507 SLC43A3Q8NBI5 491 aa7.13□□□□□ -1.27
CCNB3-208ENST00000493507 XAGE3Q8WTP9 111 aa7.13□□□□□ -1.27
CCNB3-208ENST00000493507 CYB5D2Q8WUJ1 264 aa7.13□□□□□ -1.27
CCNB3-208ENST00000493507 TMEM40Q8WWA1 233 aa7.13□□□□□ -1.27
CCNB3-208ENST00000493507 CRBNQ96SW2 442 aa7.13□□□□□ -1.27
CCNB3-208ENST00000493507 DPH2Q9BQC3 489 aaPredicted RBP7.13□□□□□ -1.27
CCNB3-208ENST00000493507 STRIP2Q9ULQ0 834 aa7.13□□□□□ -1.27
CCNB3-208ENST00000493507 ABCA3Q99758 1704 aa7.13□□□□□ -1.27
CCNB3-208ENST00000493507 AHDC1Q5TGY3 1603 aaPredicted RBP7.12□□□□□ -1.27
CCNB3-208ENST00000493507 TRPM1Q7Z4N2 1603 aa7.12□□□□□ -1.27
CCNB3-208ENST00000493507 CCDC144AA2RUR9 1427 aa7.12□□□□□ -1.27
CCNB3-208ENST00000493507 MSH6P52701 1360 aa7.12□□□□□ -1.27
CCNB3-208ENST00000493507 MEIS3P2A8K0S8 358 aa7.12□□□□□ -1.27
CCNB3-208ENST00000493507 CYP26A1O43174 497 aa7.12□□□□□ -1.27
CCNB3-208ENST00000493507 FOSL1P15407 271 aa7.12□□□□□ -1.27
CCNB3-208ENST00000493507 ATF4P18848 351 aaPredicted RBP7.12□□□□□ -1.27
CCNB3-208ENST00000493507 CYP7A1P22680 504 aa7.12□□□□□ -1.27
CCNB3-208ENST00000493507 ETV3P41162 512 aa7.12□□□□□ -1.27
CCNB3-208ENST00000493507 NASPP49321 788 aaPredicted RBP7.12□□□□□ -1.27
CCNB3-208ENST00000493507 CDCP2Q5VXM1 449 aa7.12□□□□□ -1.27
CCNB3-208ENST00000493507 FBXW10Q5XX13 1052 aa7.12□□□□□ -1.27
CCNB3-208ENST00000493507 INTS5Q6P9B9 1019 aaKnown RBP7.12□□□□□ -1.27
CCNB3-208ENST00000493507 PHACTR4Q8IZ21 702 aa7.12□□□□□ -1.27
CCNB3-208ENST00000493507 CPLX3Q8WVH0 158 aa7.12□□□□□ -1.27
CCNB3-208ENST00000493507 CCDC74BQ96LY2 380 aa7.12□□□□□ -1.27
CCNB3-208ENST00000493507 TINF2Q9BSI4 451 aa7.12□□□□□ -1.27
CCNB3-208ENST00000493507 PRDM5Q9NQX1 630 aaPredicted RBP7.12□□□□□ -1.27
CCNB3-208ENST00000493507 TPX2Q9ULW0 747 aaKnown RBP7.12□□□□□ -1.27
CCNB3-208ENST00000493507 PPT2Q9UMR5 302 aa7.12□□□□□ -1.27
CCNB3-208ENST00000493507 SHPRHQ149N8 1683 aa7.12□□□□□ -1.27
CCNB3-208ENST00000493507 CDC42BPGQ6DT37 1551 aa7.12□□□□□ -1.27
CCNB3-208ENST00000493507 PTCH1Q13635 1447 aa7.11□□□□□ -1.27
CCNB3-208ENST00000493507 PLEKHH1Q9ULM0 1364 aa7.11□□□□□ -1.27
CCNB3-208ENST00000493507 KIAA1210Q9ULL0 1709 aa7.11□□□□□ -1.27
CCNB3-208ENST00000493507 CRYBG1Q9Y4K1 1723 aa7.11□□□□□ -1.27
CCNB3-208ENST00000493507 IGF2BP3O00425 579 aaKnown RBP eCLIP7.11□□□□□ -1.27
CCNB3-208ENST00000493507 DNAJA2O60884 412 aa7.11□□□□□ -1.27
CCNB3-208ENST00000493507 EOMESO95936 686 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms