RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 ATG4CQ96DT6 458 aa9.5□□□□□ -0.89
TM4SF1-204ENST00000493348 GPCPD1Q9NPB8 672 aa9.5□□□□□ -0.89
TM4SF1-204ENST00000493348 SLC5A4Q9NY91 659 aa9.5□□□□□ -0.89
TM4SF1-204ENST00000493348 PNMA2Q9UL42 364 aa9.5□□□□□ -0.89
TM4SF1-204ENST00000493348 FRMPD2Q68DX3 1309 aaPredicted RBP9.5□□□□□ -0.89
TM4SF1-204ENST00000493348 CASTP20810 708 aaKnown RBP9.49□□□□□ -0.89
TM4SF1-204ENST00000493348 TSGA10IPQ3SY00 556 aa9.49□□□□□ -0.89
TM4SF1-204ENST00000493348 KIAA1755Q5JYT7 1200 aa9.49□□□□□ -0.89
TM4SF1-204ENST00000493348 STOX1Q6ZVD7 989 aa9.49□□□□□ -0.89
TM4SF1-204ENST00000493348 DHX32Q7L7V1 743 aaKnown RBP9.49□□□□□ -0.89
TM4SF1-204ENST00000493348 NBPF11Q86T75 865 aa9.49□□□□□ -0.89
TM4SF1-204ENST00000493348 NCAPG2Q86XI2 1143 aa9.49□□□□□ -0.89
TM4SF1-204ENST00000493348 MB21D2Q8IYB1 491 aaPredicted RBP9.49□□□□□ -0.89
TM4SF1-204ENST00000493348 TNS4Q8IZW8 715 aa9.49□□□□□ -0.89
TM4SF1-204ENST00000493348 CPXCR1Q8N123 301 aa9.49□□□□□ -0.89
TM4SF1-204ENST00000493348 ANKS1AQ92625 1134 aa9.49□□□□□ -0.89
TM4SF1-204ENST00000493348 USP26Q9BXU7 913 aa9.49□□□□□ -0.89
TM4SF1-204ENST00000493348 SPATC1LQ9H0A9 340 aa9.49□□□□□ -0.89
TM4SF1-204ENST00000493348 MORF4L1Q9UBU8 362 aa9.49□□□□□ -0.89
TM4SF1-204ENST00000493348 BIN2Q9UBW5 565 aaPredicted RBP9.49□□□□□ -0.89
TM4SF1-204ENST00000493348 SNX14Q9Y5W7 946 aa9.49□□□□□ -0.89
TM4SF1-204ENST00000493348 SLC12A7Q9Y666 1083 aa9.49□□□□□ -0.89
TM4SF1-204ENST00000493348 CYP46A1Q9Y6A2 500 aa9.49□□□□□ -0.89
TM4SF1-204ENST00000493348 WDR19Q8NEZ3 1342 aa9.49□□□□□ -0.89
TM4SF1-204ENST00000493348 DOCK3Q8IZD9 2030 aa9.48□□□□□ -0.89
TM4SF1-204ENST00000493348 PLXNB2O15031 1838 aa9.48□□□□□ -0.89
TM4SF1-204ENST00000493348 VWA5AO00534 786 aa9.48□□□□□ -0.89
TM4SF1-204ENST00000493348 PLA2G6O60733 806 aa9.48□□□□□ -0.89
TM4SF1-204ENST00000493348 DDAH1O94760 285 aa9.48□□□□□ -0.89
TM4SF1-204ENST00000493348 PDHBP11177 359 aa9.48□□□□□ -0.89
TM4SF1-204ENST00000493348 STAT3P40763 770 aa9.48□□□□□ -0.89
TM4SF1-204ENST00000493348 NOVP48745 357 aa9.48□□□□□ -0.89
TM4SF1-204ENST00000493348 GNAQP50148 359 aa9.48□□□□□ -0.89
TM4SF1-204ENST00000493348 ZNF543Q08ER8 600 aa9.48□□□□□ -0.89
TM4SF1-204ENST00000493348 TRAF1Q13077 416 aa9.48□□□□□ -0.89
TM4SF1-204ENST00000493348 SYDE2Q5VT97 1194 aa9.48□□□□□ -0.89
TM4SF1-204ENST00000493348 SNRNP48Q6IEG0 339 aaKnown RBP9.48□□□□□ -0.89
TM4SF1-204ENST00000493348 CCDC174Q6PII3 467 aa9.48□□□□□ -0.89
TM4SF1-204ENST00000493348 OTOP1Q7RTM1 612 aa9.48□□□□□ -0.89
TM4SF1-204ENST00000493348 PLEKHH3Q7Z736 793 aa9.48□□□□□ -0.89
TM4SF1-204ENST00000493348 NUDT12Q9BQG2 462 aa9.48□□□□□ -0.89
TM4SF1-204ENST00000493348 TEX13BQ9BXU2 312 aa9.48□□□□□ -0.89
TM4SF1-204ENST00000493348 LRRC2Q9BYS8 371 aa9.48□□□□□ -0.89
TM4SF1-204ENST00000493348 MROH8Q9H579 483 aa9.48□□□□□ -0.89
TM4SF1-204ENST00000493348 FBXO28Q9NVF7 368 aa9.48□□□□□ -0.89
TM4SF1-204ENST00000493348 RBPJLQ9UBG7 517 aa9.48□□□□□ -0.89
TM4SF1-204ENST00000493348 FBXO40Q9UH90 709 aa9.48□□□□□ -0.89
TM4SF1-204ENST00000493348 ADGRA2Q96PE1 1338 aa9.48□□□□□ -0.89
TM4SF1-204ENST00000493348 ZNFX1Q9P2E3 1918 aaKnown RBP9.48□□□□□ -0.89
TM4SF1-204ENST00000493348 RLFQ13129 1914 aa9.47□□□□□ -0.89
TM4SF1-204ENST00000493348 SH2B2O14492 632 aaPredicted RBP9.47□□□□□ -0.89
TM4SF1-204ENST00000493348 STRNO43815 780 aa9.47□□□□□ -0.89
TM4SF1-204ENST00000493348 GOLGA8HP0CJ92 632 aa9.47□□□□□ -0.89
TM4SF1-204ENST00000493348 LIFRP42702 1097 aa9.47□□□□□ -0.89
TM4SF1-204ENST00000493348 OAZ1P54368 228 aa9.47□□□□□ -0.89
TM4SF1-204ENST00000493348 ANAPC15P60006 121 aa9.47□□□□□ -0.89
TM4SF1-204ENST00000493348 KCTD2Q14681 263 aa9.47□□□□□ -0.89
TM4SF1-204ENST00000493348 SEC23AQ15436 765 aa9.47□□□□□ -0.89
TM4SF1-204ENST00000493348 FBXO46Q6PJ61 603 aaPredicted RBP9.47□□□□□ -0.89
TM4SF1-204ENST00000493348 DPP9Q86TI2 863 aa9.47□□□□□ -0.89
TM4SF1-204ENST00000493348 RASEFQ8IZ41 740 aa9.47□□□□□ -0.89
TM4SF1-204ENST00000493348 ZNF654Q8IZM8 581 aa9.47□□□□□ -0.89
TM4SF1-204ENST00000493348 SHCBP1Q8NEM2 672 aa9.47□□□□□ -0.89
TM4SF1-204ENST00000493348 IGDCC4Q8TDY8 1250 aa9.47□□□□□ -0.89
TM4SF1-204ENST00000493348 SOCS4Q8WXH5 440 aa9.47□□□□□ -0.89
TM4SF1-204ENST00000493348 TRIM47Q96LD4 638 aa9.47□□□□□ -0.89
TM4SF1-204ENST00000493348 ARHGAP39Q9C0H5 1083 aa9.47□□□□□ -0.89
TM4SF1-204ENST00000493348 BTBD7Q9P203 1132 aa9.47□□□□□ -0.89
TM4SF1-204ENST00000493348 SRRDQ9UH36 339 aa9.47□□□□□ -0.89
TM4SF1-204ENST00000493348 TAF6LQ9Y6J9 622 aa9.47□□□□□ -0.89
TM4SF1-204ENST00000493348 A0A0G2JMZ2 1700 aa9.46□□□□□ -0.89
TM4SF1-204ENST00000493348 CCDC196A0A1B0GTZ2 297 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 KLRF2D3W0D1 207 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 ZBTB43O43298 467 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 FCER1AP12319 257 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 ALAS1P13196 640 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 ERCC3P19447 782 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 RPS6KB1P23443 525 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 SLC16A2P36021 539 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 RGS2P41220 211 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 ANTXR2P58335 489 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 UBXN2AP68543 259 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 TMEM132BQ14DG7 1078 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 Q3C1V9 767 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 TKFCQ3LXA3 575 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 ADCK5Q3MIX3 580 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 SLC9C1Q4G0N8 1177 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 COL13A1Q5TAT6 717 aaPredicted RBP9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 Q6ZUG5 572 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 RUFY3Q7L099 469 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 GPR142Q7Z601 462 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 MICU3Q86XE3 530 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 RIOX2Q8IUF8 465 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 TRMT44Q8IYL2 757 aaKnown RBP9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 ANKRD35Q8N283 1001 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 DDX11Q96FC9 970 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 MMP19Q99542 508 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 LZTS2Q9BRK4 669 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 MOV10L1Q9BXT6 1211 aaKnown RBP9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 MCOLN1Q9GZU1 580 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms